RNA–Protein interactions for RNA: ENST00000466217.5

ATG9A-219, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-219ENST00000466217 MSH6P52701 1360 aa21.44■■□□□ 1.02
ATG9A-219ENST00000466217 ZFYVE9O95405 1425 aa21.44■■□□□ 1.02
ATG9A-219ENST00000466217 PLEKHG1Q9ULL1 1385 aa21.43■■□□□ 1.02
ATG9A-219ENST00000466217 ANKRD50Q9ULJ7 1429 aa21.43■■□□□ 1.02
ATG9A-219ENST00000466217 HDGFP51858 240 aaKnown RBP21.41■■□□□ 1.02
ATG9A-219ENST00000466217 RBM33Q96EV2 1170 aaKnown RBP21.39■■□□□ 1.01
ATG9A-219ENST00000466217 BCANQ96GW7 911 aa21.39■■□□□ 1.01
ATG9A-219ENST00000466217 RIMS2Q9UQ26 1411 aa21.38■■□□□ 1.01
ATG9A-219ENST00000466217 NCOA3Q9Y6Q9 1424 aa21.38■■□□□ 1.01
ATG9A-219ENST00000466217 POTEAQ6S8J7 498 aa21.38■■□□□ 1.01
ATG9A-219ENST00000466217 SLAIN2Q9P270 581 aa21.38■■□□□ 1.01
ATG9A-219ENST00000466217 CHD2O14647 1828 aaKnown RBP21.38■■□□□ 1.01
ATG9A-219ENST00000466217 TMEM131LA2VDJ0 1609 aa21.37■■□□□ 1.01
ATG9A-219ENST00000466217 TBX22Q9Y458 520 aa21.36■■□□□ 1.01
ATG9A-219ENST00000466217 JCADQ9P266 1359 aa21.36■■□□□ 1.01
ATG9A-219ENST00000466217 GCC2Q8IWJ2 1684 aa21.35■■□□□ 1.01
ATG9A-219ENST00000466217 PPP1R15AO75807 674 aaPredicted RBP21.35■■□□□ 1.01
ATG9A-219ENST00000466217 FAM50AQ14320 339 aaKnown RBP21.35■■□□□ 1.01
ATG9A-219ENST00000466217 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.35■■□□□ 1.01
ATG9A-219ENST00000466217 MYO5BQ9ULV0 1848 aa21.34■■□□□ 1.01
ATG9A-219ENST00000466217 PHLPP1O60346 1717 aa21.33■■□□□ 1.01
ATG9A-219ENST00000466217 UNC13BO14795 1591 aa21.33■■□□□ 1.01
ATG9A-219ENST00000466217 PIK3R4Q99570 1358 aa21.31■■□□□ 1
ATG9A-219ENST00000466217 DIP2AQ14689 1571 aa21.31■■□□□ 1
ATG9A-219ENST00000466217 ADAMTS13Q76LX8 1427 aa21.29■■□□□ 1
ATG9A-219ENST00000466217 COL16A1Q07092 1604 aaPredicted RBP21.29■■□□□ 1
ATG9A-219ENST00000466217 ROCK1Q13464 1354 aa21.27■■□□□ 1
ATG9A-219ENST00000466217 E9PCH4 1651 aa21.27■■□□□ 1
ATG9A-219ENST00000466217 CADPS2Q86UW7 1296 aa21.26■□□□□ 0.99
ATG9A-219ENST00000466217 SPATA31A6Q5VVP1 1343 aa21.26■□□□□ 0.99
ATG9A-219ENST00000466217 IQGAP3Q86VI3 1631 aa21.26■□□□□ 0.99
ATG9A-219ENST00000466217 C19orf44Q9H6X5 657 aa21.25■□□□□ 0.99
ATG9A-219ENST00000466217 CHGAP10645 457 aaKnown RBP21.24■□□□□ 0.99
ATG9A-219ENST00000466217 AHDC1Q5TGY3 1603 aaPredicted RBP21.24■□□□□ 0.99
ATG9A-219ENST00000466217 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.23■□□□□ 0.99
ATG9A-219ENST00000466217 C14orf37Q86TY3 774 aa21.22■□□□□ 0.99
ATG9A-219ENST00000466217 TRPM2O94759 1503 aa21.22■□□□□ 0.99
ATG9A-219ENST00000466217 ATF3P18847 181 aa21.21■□□□□ 0.99
ATG9A-219ENST00000466217 LRP6O75581 1613 aa21.2■□□□□ 0.98
ATG9A-219ENST00000466217 SHPRHQ149N8 1683 aa21.19■□□□□ 0.98
ATG9A-219ENST00000466217 DCCP43146 1447 aa21.19■□□□□ 0.98
ATG9A-219ENST00000466217 ZNF772Q68DY9 489 aaPredicted RBP21.18■□□□□ 0.98
ATG9A-219ENST00000466217 NUTM2DQ5VT03 806 aaPredicted RBP21.17■□□□□ 0.98
ATG9A-219ENST00000466217 AMOTL2Q9Y2J4 779 aa21.17■□□□□ 0.98
ATG9A-219ENST00000466217 NUP155O75694 1391 aa21.17■□□□□ 0.98
ATG9A-219ENST00000466217 PTPRUQ92729 1446 aa21.17■□□□□ 0.98
ATG9A-219ENST00000466217 SETD1AO15047 1707 aaKnown RBP21.17■□□□□ 0.98
ATG9A-219ENST00000466217 MEX3CQ5U5Q3 659 aaKnown RBP21.15■□□□□ 0.98
ATG9A-219ENST00000466217 BRINP3Q76B58 766 aa21.14■□□□□ 0.97
ATG9A-219ENST00000466217 SETBP1Q9Y6X0 1596 aa21.14■□□□□ 0.97
ATG9A-219ENST00000466217 XRN1Q8IZH2 1706 aaKnown RBP21.12■□□□□ 0.97
ATG9A-219ENST00000466217 NRXN3Q9Y4C0 1643 aa21.12■□□□□ 0.97
ATG9A-219ENST00000466217 SETD5Q9C0A6 1442 aa21.1■□□□□ 0.97
ATG9A-219ENST00000466217 ASXL1Q8IXJ9 1541 aa21.09■□□□□ 0.97
ATG9A-219ENST00000466217 MST1RQ04912 1400 aa21.08■□□□□ 0.97
ATG9A-219ENST00000466217 SPHKAPQ2M3C7 1700 aa21.08■□□□□ 0.97
ATG9A-219ENST00000466217 CDK12Q9NYV4 1490 aaPredicted RBP21.07■□□□□ 0.96
ATG9A-219ENST00000466217 UPF1Q92900 1129 aaKnown RBP eCLIP21.06■□□□□ 0.96
ATG9A-219ENST00000466217 NHSL1Q5SYE7 1610 aa21.05■□□□□ 0.96
ATG9A-219ENST00000466217 RXRBP28702 533 aa21.05■□□□□ 0.96
ATG9A-219ENST00000466217 METP08581 1390 aa21.04■□□□□ 0.96
ATG9A-219ENST00000466217 ADGRL3Q9HAR2 1447 aa21.04■□□□□ 0.96
ATG9A-219ENST00000466217 ZNF326Q5BKZ1 582 aaKnown RBP21.03■□□□□ 0.96
ATG9A-219ENST00000466217 TRIM52Q96A61 297 aa21.03■□□□□ 0.96
ATG9A-219ENST00000466217 LRRC59Q96AG4 307 aaKnown RBP21.03■□□□□ 0.96
ATG9A-219ENST00000466217 NEXMIFQ5QGS0 1516 aa21.01■□□□□ 0.95
ATG9A-219ENST00000466217 NUTM2BA6NNL0 878 aaPredicted RBP21.01■□□□□ 0.95
ATG9A-219ENST00000466217 NUTM2EB1AL46 878 aaPredicted RBP21.01■□□□□ 0.95
ATG9A-219ENST00000466217 ITGAEP38570 1179 aa21.01■□□□□ 0.95
ATG9A-219ENST00000466217 NUTM2AQ8IVF1 878 aaPredicted RBP21.01■□□□□ 0.95
ATG9A-219ENST00000466217 AFF2P51816 1311 aa21■□□□□ 0.95
ATG9A-219ENST00000466217 CLTCL1P53675 1640 aa20.98■□□□□ 0.95
ATG9A-219ENST00000466217 PNPLA6Q8IY17 1366 aa20.97■□□□□ 0.95
ATG9A-219ENST00000466217 NALCNQ8IZF0 1738 aa20.96■□□□□ 0.95
ATG9A-219ENST00000466217 PTCH1Q13635 1447 aa20.95■□□□□ 0.95
ATG9A-219ENST00000466217 LAMC1P11047 1609 aa20.94■□□□□ 0.94
ATG9A-219ENST00000466217 PRAG1Q86YV5 1406 aa20.94■□□□□ 0.94
ATG9A-219ENST00000466217 C1orf167Q5SNV9 1468 aa20.94■□□□□ 0.94
ATG9A-219ENST00000466217 KIF1BO60333 1816 aa20.92■□□□□ 0.94
ATG9A-219ENST00000466217 RBM6P78332 1123 aaKnown RBP20.92■□□□□ 0.94
ATG9A-219ENST00000466217 C8orf37Q96NL8 207 aa20.92■□□□□ 0.94
ATG9A-219ENST00000466217 DDX17Q92841 729 aaKnown RBP20.91■□□□□ 0.94
ATG9A-219ENST00000466217 QTRT2Q9H974 415 aaKnown RBP20.91■□□□□ 0.94
ATG9A-219ENST00000466217 NAIPQ13075 1403 aa20.9■□□□□ 0.94
ATG9A-219ENST00000466217 VGFO15240 615 aaPredicted RBP20.9■□□□□ 0.94
ATG9A-219ENST00000466217 RGS12O14924 1447 aa20.89■□□□□ 0.94
ATG9A-219ENST00000466217 RRBP1Q9P2E9 1410 aaKnown RBP20.88■□□□□ 0.93
ATG9A-219ENST00000466217 SOS2Q07890 1332 aaPredicted RBP20.88■□□□□ 0.93
ATG9A-219ENST00000466217 RPGRIP1LQ68CZ1 1315 aa20.88■□□□□ 0.93
ATG9A-219ENST00000466217 ROBO2Q9HCK4 1378 aa20.87■□□□□ 0.93
ATG9A-219ENST00000466217 HFM1A2PYH4 1435 aa20.86■□□□□ 0.93
ATG9A-219ENST00000466217 NGLY1Q96IV0 654 aa20.85■□□□□ 0.93
ATG9A-219ENST00000466217 PPARGC1BQ86YN6 1023 aaKnown RBP20.83■□□□□ 0.93
ATG9A-219ENST00000466217 ORAI2Q96SN7 254 aa20.83■□□□□ 0.93
ATG9A-219ENST00000466217 ADAMTS2O95450 1211 aa20.82■□□□□ 0.92
ATG9A-219ENST00000466217 FNBP4Q8N3X1 1017 aaPredicted RBP20.81■□□□□ 0.92
ATG9A-219ENST00000466217 COL22A1Q8NFW1 1626 aaPredicted RBP20.8■□□□□ 0.92
ATG9A-219ENST00000466217 USP21Q9UK80 565 aa20.79■□□□□ 0.92
ATG9A-219ENST00000466217 TRPC5Q9UL62 973 aaPredicted RBP20.79■□□□□ 0.92
ATG9A-219ENST00000466217 PPLO60437 1756 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms