RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 TMEM131LA2VDJ0 1609 aa19.11■□□□□ 0.65
SOX2-OT-203ENST00000466034 KCNA6P17658 529 aa19.11■□□□□ 0.65
SOX2-OT-203ENST00000466034 MYO5BQ9ULV0 1848 aa19.11■□□□□ 0.65
SOX2-OT-203ENST00000466034 NWD1Q149M9 1564 aa19.1■□□□□ 0.65
SOX2-OT-203ENST00000466034 SOCS7O14512 581 aa19.1■□□□□ 0.65
SOX2-OT-203ENST00000466034 MED1Q15648 1581 aaPredicted RBP19.09■□□□□ 0.65
SOX2-OT-203ENST00000466034 PLEKHG1Q9ULL1 1385 aa19.08■□□□□ 0.65
SOX2-OT-203ENST00000466034 SLC26A8Q96RN1 970 aa19.08■□□□□ 0.64
SOX2-OT-203ENST00000466034 NKTRP30414 1462 aaKnown RBP19.08■□□□□ 0.64
SOX2-OT-203ENST00000466034 RIMS2Q9UQ26 1411 aa19.08■□□□□ 0.64
SOX2-OT-203ENST00000466034 HDGFP51858 240 aaKnown RBP19.07■□□□□ 0.64
SOX2-OT-203ENST00000466034 NUP155O75694 1391 aa19.06■□□□□ 0.64
SOX2-OT-203ENST00000466034 TMEM94Q12767 1356 aa19.06■□□□□ 0.64
SOX2-OT-203ENST00000466034 RRBP1Q9P2E9 1410 aaKnown RBP19.05■□□□□ 0.64
SOX2-OT-203ENST00000466034 ITGAEP38570 1179 aa19.04■□□□□ 0.64
SOX2-OT-203ENST00000466034 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.04■□□□□ 0.64
SOX2-OT-203ENST00000466034 FAM135BQ49AJ0 1406 aa19.03■□□□□ 0.64
SOX2-OT-203ENST00000466034 CHD2O14647 1828 aaKnown RBP19.03■□□□□ 0.64
SOX2-OT-203ENST00000466034 PPARGC1BQ86YN6 1023 aaKnown RBP19.03■□□□□ 0.64
SOX2-OT-203ENST00000466034 PROSER2Q86WR7 435 aaPredicted RBP19.02■□□□□ 0.64
SOX2-OT-203ENST00000466034 PPP1R15AO75807 674 aaPredicted RBP19.01■□□□□ 0.63
SOX2-OT-203ENST00000466034 BCANQ96GW7 911 aa19.01■□□□□ 0.63
SOX2-OT-203ENST00000466034 TBX22Q9Y458 520 aa19.01■□□□□ 0.63
SOX2-OT-203ENST00000466034 DIP2AQ14689 1571 aa19■□□□□ 0.63
SOX2-OT-203ENST00000466034 CHGAP10645 457 aaKnown RBP18.99■□□□□ 0.63
SOX2-OT-203ENST00000466034 ADAMTS13Q76LX8 1427 aa18.99■□□□□ 0.63
SOX2-OT-203ENST00000466034 SPHKAPQ2M3C7 1700 aa18.98■□□□□ 0.63
SOX2-OT-203ENST00000466034 NCOA3Q9Y6Q9 1424 aa18.97■□□□□ 0.63
SOX2-OT-203ENST00000466034 PIK3R4Q99570 1358 aa18.96■□□□□ 0.63
SOX2-OT-203ENST00000466034 MSH6P52701 1360 aa18.95■□□□□ 0.62
SOX2-OT-203ENST00000466034 NAIPQ13075 1403 aa18.95■□□□□ 0.62
SOX2-OT-203ENST00000466034 ROBO1Q9Y6N7 1651 aa18.95■□□□□ 0.62
SOX2-OT-203ENST00000466034 RBM33Q96EV2 1170 aaKnown RBP18.93■□□□□ 0.62
SOX2-OT-203ENST00000466034 TRPM2O94759 1503 aa18.92■□□□□ 0.62
SOX2-OT-203ENST00000466034 NUTM2DQ5VT03 806 aaPredicted RBP18.91■□□□□ 0.62
SOX2-OT-203ENST00000466034 KCNA4P22459 653 aa18.9■□□□□ 0.62
SOX2-OT-203ENST00000466034 SETBP1Q9Y6X0 1596 aa18.89■□□□□ 0.62
SOX2-OT-203ENST00000466034 HFM1A2PYH4 1435 aa18.89■□□□□ 0.61
SOX2-OT-203ENST00000466034 NRXN3Q9Y4C0 1643 aa18.89■□□□□ 0.61
SOX2-OT-203ENST00000466034 SLAIN2Q9P270 581 aa18.88■□□□□ 0.61
SOX2-OT-203ENST00000466034 CLTCL1P53675 1640 aa18.88■□□□□ 0.61
SOX2-OT-203ENST00000466034 PTPRUQ92729 1446 aa18.87■□□□□ 0.61
SOX2-OT-203ENST00000466034 XRN1Q8IZH2 1706 aaKnown RBP18.85■□□□□ 0.61
SOX2-OT-203ENST00000466034 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.85■□□□□ 0.61
SOX2-OT-203ENST00000466034 NEXMIFQ5QGS0 1516 aa18.84■□□□□ 0.61
SOX2-OT-203ENST00000466034 C19orf44Q9H6X5 657 aa18.84■□□□□ 0.61
SOX2-OT-203ENST00000466034 AMOTL2Q9Y2J4 779 aa18.84■□□□□ 0.61
SOX2-OT-203ENST00000466034 KIF1BO60333 1816 aa18.84■□□□□ 0.61
SOX2-OT-203ENST00000466034 ZNF326Q5BKZ1 582 aaKnown RBP18.83■□□□□ 0.6
SOX2-OT-203ENST00000466034 PHLPP1O60346 1717 aa18.83■□□□□ 0.6
SOX2-OT-203ENST00000466034 CADPS2Q86UW7 1296 aa18.82■□□□□ 0.6
SOX2-OT-203ENST00000466034 DCCP43146 1447 aa18.81■□□□□ 0.6
SOX2-OT-203ENST00000466034 C14orf37Q86TY3 774 aa18.8■□□□□ 0.6
SOX2-OT-203ENST00000466034 RGS17Q9UGC6 210 aaPredicted RBP18.8■□□□□ 0.6
SOX2-OT-203ENST00000466034 COL16A1Q07092 1604 aaPredicted RBP18.8■□□□□ 0.6
SOX2-OT-203ENST00000466034 JCADQ9P266 1359 aa18.79■□□□□ 0.6
SOX2-OT-203ENST00000466034 AHDC1Q5TGY3 1603 aaPredicted RBP18.78■□□□□ 0.6
SOX2-OT-203ENST00000466034 ATF3P18847 181 aa18.78■□□□□ 0.6
SOX2-OT-203ENST00000466034 TRIM52Q96A61 297 aa18.78■□□□□ 0.6
SOX2-OT-203ENST00000466034 METP08581 1390 aa18.78■□□□□ 0.6
SOX2-OT-203ENST00000466034 SLC4A1APQ9BWU0 796 aaKnown RBP18.76■□□□□ 0.59
SOX2-OT-203ENST00000466034 RPGRIP1LQ68CZ1 1315 aa18.75■□□□□ 0.59
SOX2-OT-203ENST00000466034 SETD1AO15047 1707 aaKnown RBP18.74■□□□□ 0.59
SOX2-OT-203ENST00000466034 VGFO15240 615 aaPredicted RBP18.73■□□□□ 0.59
SOX2-OT-203ENST00000466034 PRAG1Q86YV5 1406 aa18.72■□□□□ 0.59
SOX2-OT-203ENST00000466034 ADGRL3Q9HAR2 1447 aa18.72■□□□□ 0.59
SOX2-OT-203ENST00000466034 SHPRHQ149N8 1683 aa18.71■□□□□ 0.59
SOX2-OT-203ENST00000466034 BRINP3Q76B58 766 aa18.71■□□□□ 0.59
SOX2-OT-203ENST00000466034 MST1RQ04912 1400 aa18.71■□□□□ 0.59
SOX2-OT-203ENST00000466034 PTCH1Q13635 1447 aa18.71■□□□□ 0.59
SOX2-OT-203ENST00000466034 SPATA31A6Q5VVP1 1343 aa18.71■□□□□ 0.59
SOX2-OT-203ENST00000466034 PPLO60437 1756 aa18.7■□□□□ 0.58
SOX2-OT-203ENST00000466034 POTEAQ6S8J7 498 aa18.69■□□□□ 0.58
SOX2-OT-203ENST00000466034 PPP4R3CPQ6ZMV5 832 aa18.69■□□□□ 0.58
SOX2-OT-203ENST00000466034 ASXL1Q8IXJ9 1541 aa18.69■□□□□ 0.58
SOX2-OT-203ENST00000466034 NALCNQ8IZF0 1738 aa18.69■□□□□ 0.58
SOX2-OT-203ENST00000466034 NHSL1Q5SYE7 1610 aa18.67■□□□□ 0.58
SOX2-OT-203ENST00000466034 ACIN1Q9UKV3 1341 aaKnown RBP18.66■□□□□ 0.58
SOX2-OT-203ENST00000466034 LRP6O75581 1613 aa18.66■□□□□ 0.58
SOX2-OT-203ENST00000466034 CCDC144AA2RUR9 1427 aa18.65■□□□□ 0.58
SOX2-OT-203ENST00000466034 SETD5Q9C0A6 1442 aa18.65■□□□□ 0.58
SOX2-OT-203ENST00000466034 SPATA31E1Q6ZUB1 1445 aa18.64■□□□□ 0.57
SOX2-OT-203ENST00000466034 MPHOSPH9Q99550 1183 aa18.63■□□□□ 0.57
SOX2-OT-203ENST00000466034 ROBO2Q9HCK4 1378 aa18.63■□□□□ 0.57
SOX2-OT-203ENST00000466034 IFT172Q9UG01 1749 aa18.61■□□□□ 0.57
SOX2-OT-203ENST00000466034 C1orf167Q5SNV9 1468 aa18.61■□□□□ 0.57
SOX2-OT-203ENST00000466034 LAMC1P11047 1609 aa18.6■□□□□ 0.57
SOX2-OT-203ENST00000466034 ANKRD30BQ9BXX2 1392 aa18.6■□□□□ 0.57
SOX2-OT-203ENST00000466034 LRRC59Q96AG4 307 aaKnown RBP18.58■□□□□ 0.56
SOX2-OT-203ENST00000466034 ADGRF5Q8IZF2 1346 aa18.57■□□□□ 0.56
SOX2-OT-203ENST00000466034 MEX3CQ5U5Q3 659 aaKnown RBP18.57■□□□□ 0.56
SOX2-OT-203ENST00000466034 ZNF772Q68DY9 489 aaPredicted RBP18.57■□□□□ 0.56
SOX2-OT-203ENST00000466034 TECPR2O15040 1411 aa18.57■□□□□ 0.56
SOX2-OT-203ENST00000466034 CDC42BPGQ6DT37 1551 aa18.55■□□□□ 0.56
SOX2-OT-203ENST00000466034 PNPLA6Q8IY17 1366 aa18.55■□□□□ 0.56
SOX2-OT-203ENST00000466034 RGL3Q3MIN7 710 aa18.54■□□□□ 0.56
SOX2-OT-203ENST00000466034 PIK3C2GO75747 1445 aa18.54■□□□□ 0.56
SOX2-OT-203ENST00000466034 KNDC1Q76NI1 1749 aa18.54■□□□□ 0.56
SOX2-OT-203ENST00000466034 DDX17Q92841 729 aaKnown RBP18.53■□□□□ 0.56
SOX2-OT-203ENST00000466034 LRPPRCP42704 1394 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms