RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 RIMS2Q9UQ26 1411 aa21.33■■□□□ 1.01
CACNA1C-224ENST00000465934 HSPA1LP34931 641 aa21.3■■□□□ 1
CACNA1C-224ENST00000465934 NUTM2DQ5VT03 806 aaPredicted RBP21.3■■□□□ 1
CACNA1C-224ENST00000465934 BCANQ96GW7 911 aa21.3■■□□□ 1
CACNA1C-224ENST00000465934 DISP3Q9P2K9 1392 aa21.3■■□□□ 1
CACNA1C-224ENST00000465934 PPP1R15AO75807 674 aaPredicted RBP21.29■■□□□ 1
CACNA1C-224ENST00000465934 PLEKHG1Q9ULL1 1385 aa21.28■■□□□ 1
CACNA1C-224ENST00000465934 MYO5BQ9ULV0 1848 aa21.28■■□□□ 1
CACNA1C-224ENST00000465934 KCNA6P17658 529 aa21.27■■□□□ 1
CACNA1C-224ENST00000465934 RBM33Q96EV2 1170 aaKnown RBP21.27■■□□□ 1
CACNA1C-224ENST00000465934 HFM1A2PYH4 1435 aa21.27■■□□□ 1
CACNA1C-224ENST00000465934 TMEM94Q12767 1356 aa21.25■□□□□ 0.99
CACNA1C-224ENST00000465934 HDGFP51858 240 aaKnown RBP21.23■□□□□ 0.99
CACNA1C-224ENST00000465934 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.22■□□□□ 0.99
CACNA1C-224ENST00000465934 XIRP1Q702N8 1843 aaKnown RBP21.21■□□□□ 0.99
CACNA1C-224ENST00000465934 PROSER2Q86WR7 435 aaPredicted RBP21.21■□□□□ 0.99
CACNA1C-224ENST00000465934 TRIM52Q96A61 297 aa21.21■□□□□ 0.99
CACNA1C-224ENST00000465934 NWD1Q149M9 1564 aa21.21■□□□□ 0.99
CACNA1C-224ENST00000465934 ADAMTS13Q76LX8 1427 aa21.21■□□□□ 0.99
CACNA1C-224ENST00000465934 SPHKAPQ2M3C7 1700 aa21.19■□□□□ 0.98
CACNA1C-224ENST00000465934 ILDR2Q71H61 639 aa21.19■□□□□ 0.98
CACNA1C-224ENST00000465934 NKTRP30414 1462 aaKnown RBP21.19■□□□□ 0.98
CACNA1C-224ENST00000465934 TBX22Q9Y458 520 aa21.18■□□□□ 0.98
CACNA1C-224ENST00000465934 CLTCL1P53675 1640 aa21.16■□□□□ 0.98
CACNA1C-224ENST00000465934 TRPM2O94759 1503 aa21.16■□□□□ 0.98
CACNA1C-224ENST00000465934 ZNF326Q5BKZ1 582 aaKnown RBP21.15■□□□□ 0.98
CACNA1C-224ENST00000465934 SLC4A1APQ9BWU0 796 aaKnown RBP21.14■□□□□ 0.97
CACNA1C-224ENST00000465934 FOXD1Q16676 465 aa21.11■□□□□ 0.97
CACNA1C-224ENST00000465934 DIP2AQ14689 1571 aa21.1■□□□□ 0.97
CACNA1C-224ENST00000465934 PTPRUQ92729 1446 aa21.1■□□□□ 0.97
CACNA1C-224ENST00000465934 CHD2O14647 1828 aaKnown RBP21.09■□□□□ 0.97
CACNA1C-224ENST00000465934 MSH6P52701 1360 aa21.09■□□□□ 0.97
CACNA1C-224ENST00000465934 NRXN3Q9Y4C0 1643 aa21.08■□□□□ 0.97
CACNA1C-224ENST00000465934 MED1Q15648 1581 aaPredicted RBP21.08■□□□□ 0.97
CACNA1C-224ENST00000465934 FAM135BQ49AJ0 1406 aa21.08■□□□□ 0.97
CACNA1C-224ENST00000465934 NEXMIFQ5QGS0 1516 aa21.08■□□□□ 0.96
CACNA1C-224ENST00000465934 PIK3R4Q99570 1358 aa21.08■□□□□ 0.96
CACNA1C-224ENST00000465934 SETBP1Q9Y6X0 1596 aa21.07■□□□□ 0.96
CACNA1C-224ENST00000465934 AMOTL2Q9Y2J4 779 aa21.06■□□□□ 0.96
CACNA1C-224ENST00000465934 METP08581 1390 aa21.06■□□□□ 0.96
CACNA1C-224ENST00000465934 C14orf37Q86TY3 774 aa21.03■□□□□ 0.96
CACNA1C-224ENST00000465934 SLAIN2Q9P270 581 aa21.03■□□□□ 0.96
CACNA1C-224ENST00000465934 MPHOSPH9Q99550 1183 aa21.02■□□□□ 0.96
CACNA1C-224ENST00000465934 ROBO1Q9Y6N7 1651 aa21.02■□□□□ 0.95
CACNA1C-224ENST00000465934 NCOA3Q9Y6Q9 1424 aa21.01■□□□□ 0.95
CACNA1C-224ENST00000465934 XRN1Q8IZH2 1706 aaKnown RBP20.98■□□□□ 0.95
CACNA1C-224ENST00000465934 C19orf44Q9H6X5 657 aa20.98■□□□□ 0.95
CACNA1C-224ENST00000465934 KIF1BO60333 1816 aa20.98■□□□□ 0.95
CACNA1C-224ENST00000465934 SETD5Q9C0A6 1442 aa20.97■□□□□ 0.95
CACNA1C-224ENST00000465934 CCDC144AA2RUR9 1427 aa20.95■□□□□ 0.95
CACNA1C-224ENST00000465934 VGFO15240 615 aaPredicted RBP20.95■□□□□ 0.94
CACNA1C-224ENST00000465934 SOCS7O14512 581 aa20.94■□□□□ 0.94
CACNA1C-224ENST00000465934 ATF3P18847 181 aa20.94■□□□□ 0.94
CACNA1C-224ENST00000465934 CADPS2Q86UW7 1296 aa20.94■□□□□ 0.94
CACNA1C-224ENST00000465934 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.94■□□□□ 0.94
CACNA1C-224ENST00000465934 RPGRIP1LQ68CZ1 1315 aa20.94■□□□□ 0.94
CACNA1C-224ENST00000465934 PHF23Q9BUL5 403 aaPredicted RBP20.93■□□□□ 0.94
CACNA1C-224ENST00000465934 RAB3GAP2Q9H2M9 1393 aa20.93■□□□□ 0.94
CACNA1C-224ENST00000465934 RGL3Q3MIN7 710 aa20.92■□□□□ 0.94
CACNA1C-224ENST00000465934 SPATA31E1Q6ZUB1 1445 aa20.92■□□□□ 0.94
CACNA1C-224ENST00000465934 ADGRF5Q8IZF2 1346 aa20.89■□□□□ 0.93
CACNA1C-224ENST00000465934 DCCP43146 1447 aa20.88■□□□□ 0.93
CACNA1C-224ENST00000465934 ROBO2Q9HCK4 1378 aa20.88■□□□□ 0.93
CACNA1C-224ENST00000465934 SETD1AO15047 1707 aaKnown RBP20.88■□□□□ 0.93
CACNA1C-224ENST00000465934 PPLO60437 1756 aa20.87■□□□□ 0.93
CACNA1C-224ENST00000465934 BRINP3Q76B58 766 aa20.87■□□□□ 0.93
CACNA1C-224ENST00000465934 ADGRL3Q9HAR2 1447 aa20.87■□□□□ 0.93
CACNA1C-224ENST00000465934 RGS17Q9UGC6 210 aaPredicted RBP20.86■□□□□ 0.93
CACNA1C-224ENST00000465934 PHLPP1O60346 1717 aa20.86■□□□□ 0.93
CACNA1C-224ENST00000465934 MST1RQ04912 1400 aa20.86■□□□□ 0.93
CACNA1C-224ENST00000465934 PTCH1Q13635 1447 aa20.86■□□□□ 0.93
CACNA1C-224ENST00000465934 COL16A1Q07092 1604 aaPredicted RBP20.85■□□□□ 0.93
CACNA1C-224ENST00000465934 JCADQ9P266 1359 aa20.83■□□□□ 0.92
CACNA1C-224ENST00000465934 ACIN1Q9UKV3 1341 aaKnown RBP20.82■□□□□ 0.92
CACNA1C-224ENST00000465934 PRAG1Q86YV5 1406 aa20.82■□□□□ 0.92
CACNA1C-224ENST00000465934 ASXL1Q8IXJ9 1541 aa20.82■□□□□ 0.92
CACNA1C-224ENST00000465934 ANKRD30BQ9BXX2 1392 aa20.82■□□□□ 0.92
CACNA1C-224ENST00000465934 AHDC1Q5TGY3 1603 aaPredicted RBP20.82■□□□□ 0.92
CACNA1C-224ENST00000465934 NALCNQ8IZF0 1738 aa20.81■□□□□ 0.92
CACNA1C-224ENST00000465934 PIK3C2GO75747 1445 aa20.78■□□□□ 0.92
CACNA1C-224ENST00000465934 TMEM132EQ6IEE7 984 aa20.78■□□□□ 0.92
CACNA1C-224ENST00000465934 DDX17Q92841 729 aaKnown RBP20.78■□□□□ 0.92
CACNA1C-224ENST00000465934 STK26Q9P289 416 aa20.78■□□□□ 0.92
CACNA1C-224ENST00000465934 IFT172Q9UG01 1749 aa20.78■□□□□ 0.92
CACNA1C-224ENST00000465934 C1orf167Q5SNV9 1468 aa20.75■□□□□ 0.91
CACNA1C-224ENST00000465934 LRP6O75581 1613 aa20.75■□□□□ 0.91
CACNA1C-224ENST00000465934 POTEAQ6S8J7 498 aa20.74■□□□□ 0.91
CACNA1C-224ENST00000465934 LRPPRCP42704 1394 aaKnown RBP20.73■□□□□ 0.91
CACNA1C-224ENST00000465934 WAPLQ7Z5K2 1190 aa20.73■□□□□ 0.91
CACNA1C-224ENST00000465934 TECPR2O15040 1411 aa20.72■□□□□ 0.91
CACNA1C-224ENST00000465934 ORAI2Q96SN7 254 aa20.72■□□□□ 0.91
CACNA1C-224ENST00000465934 SPATA31A6Q5VVP1 1343 aa20.72■□□□□ 0.91
CACNA1C-224ENST00000465934 PLEKHH1Q9ULM0 1364 aa20.72■□□□□ 0.91
CACNA1C-224ENST00000465934 NRXN1Q9ULB1 1477 aa20.71■□□□□ 0.91
CACNA1C-224ENST00000465934 MYOM2P54296 1465 aa20.7■□□□□ 0.9
CACNA1C-224ENST00000465934 CFAP70Q5T0N1 1121 aa20.7■□□□□ 0.9
CACNA1C-224ENST00000465934 ABCC11Q96J66 1382 aa20.7■□□□□ 0.9
CACNA1C-224ENST00000465934 NHSL1Q5SYE7 1610 aa20.69■□□□□ 0.9
CACNA1C-224ENST00000465934 HRCP23327 699 aa20.69■□□□□ 0.9
CACNA1C-224ENST00000465934 C14orf93Q9H972 538 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms