RNA–Protein interactions for RNA: ENST00000465887.2

POLR1D-204, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 2

Gene POLR1D, Length 2,118 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-204ENST00000465887 MYOM2P54296 1465 aa22.61■■□□□ 1.21
POLR1D-204ENST00000465887 NLRP1Q9C000 1473 aa22.61■■□□□ 1.21
POLR1D-204ENST00000465887 ZNF142P52746 1687 aaPredicted RBP22.61■■□□□ 1.21
POLR1D-204ENST00000465887 ZNF326Q5BKZ1 582 aaKnown RBP22.6■■□□□ 1.21
POLR1D-204ENST00000465887 KIAA1210Q9ULL0 1709 aa22.57■■□□□ 1.2
POLR1D-204ENST00000465887 RALGAPBQ86X10 1494 aa22.57■■□□□ 1.2
POLR1D-204ENST00000465887 CEP170BQ9Y4F5 1589 aaPredicted RBP22.57■■□□□ 1.2
POLR1D-204ENST00000465887 NRXN1Q9ULB1 1477 aa22.56■■□□□ 1.2
POLR1D-204ENST00000465887 STAG3Q9UJ98 1225 aa22.54■■□□□ 1.2
POLR1D-204ENST00000465887 RPGRIP1LQ68CZ1 1315 aa22.53■■□□□ 1.2
POLR1D-204ENST00000465887 ADGRF5Q8IZF2 1346 aa22.53■■□□□ 1.2
POLR1D-204ENST00000465887 KDM4FA0A1W2PPD8 638 aa22.52■■□□□ 1.2
POLR1D-204ENST00000465887 AEBP2Q6ZN18 517 aaPredicted RBP22.51■■□□□ 1.19
POLR1D-204ENST00000465887 ZFYVE9O95405 1425 aa22.51■■□□□ 1.19
POLR1D-204ENST00000465887 NUTM2DQ5VT03 806 aaPredicted RBP22.51■■□□□ 1.19
POLR1D-204ENST00000465887 LAMC1P11047 1609 aa22.5■■□□□ 1.19
POLR1D-204ENST00000465887 STAC3Q96MF2 364 aa22.5■■□□□ 1.19
POLR1D-204ENST00000465887 PIK3C2GO75747 1445 aa22.5■■□□□ 1.19
POLR1D-204ENST00000465887 RIMS2Q9UQ26 1411 aa22.49■■□□□ 1.19
POLR1D-204ENST00000465887 IQGAP1P46940 1657 aa22.47■■□□□ 1.19
POLR1D-204ENST00000465887 SETD1AO15047 1707 aaKnown RBP22.47■■□□□ 1.19
POLR1D-204ENST00000465887 NRXN3Q9Y4C0 1643 aa22.46■■□□□ 1.19
POLR1D-204ENST00000465887 SLIT1O75093 1534 aa22.46■■□□□ 1.19
POLR1D-204ENST00000465887 TMEM2Q9UHN6 1383 aa22.45■■□□□ 1.19
POLR1D-204ENST00000465887 ARHGAP23Q9P227 1491 aa22.45■■□□□ 1.18
POLR1D-204ENST00000465887 ROCK2O75116 1388 aaKnown RBP22.44■■□□□ 1.18
POLR1D-204ENST00000465887 NBPF1Q3BBV0 1214 aa22.44■■□□□ 1.18
POLR1D-204ENST00000465887 VGFO15240 615 aaPredicted RBP22.43■■□□□ 1.18
POLR1D-204ENST00000465887 GPRASP1Q5JY77 1395 aa22.43■■□□□ 1.18
POLR1D-204ENST00000465887 SETBP1Q9Y6X0 1596 aa22.42■■□□□ 1.18
POLR1D-204ENST00000465887 CFAP70Q5T0N1 1121 aa22.4■■□□□ 1.18
POLR1D-204ENST00000465887 ALKQ9UM73 1620 aa22.39■■□□□ 1.18
POLR1D-204ENST00000465887 ASXL1Q8IXJ9 1541 aa22.39■■□□□ 1.18
POLR1D-204ENST00000465887 SENP3Q9H4L4 574 aaPredicted RBP22.39■■□□□ 1.18
POLR1D-204ENST00000465887 ADGRB1O14514 1584 aa22.39■■□□□ 1.18
POLR1D-204ENST00000465887 POLR1AO95602 1720 aaPredicted RBP22.39■■□□□ 1.18
POLR1D-204ENST00000465887 CARD11Q9BXL7 1154 aa22.38■■□□□ 1.17
POLR1D-204ENST00000465887 HIRIP3Q9BW71 556 aaPredicted RBP22.37■■□□□ 1.17
POLR1D-204ENST00000465887 USP47Q96K76 1375 aa22.37■■□□□ 1.17
POLR1D-204ENST00000465887 THEMISQ8N1K5 641 aaPredicted RBP22.36■■□□□ 1.17
POLR1D-204ENST00000465887 C14orf93Q9H972 538 aaKnown RBP22.36■■□□□ 1.17
POLR1D-204ENST00000465887 ZNF316A6NFI3 1004 aaPredicted RBP22.36■■□□□ 1.17
POLR1D-204ENST00000465887 LTKP29376 864 aa22.36■■□□□ 1.17
POLR1D-204ENST00000465887 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.36■■□□□ 1.17
POLR1D-204ENST00000465887 HSPA5P11021 654 aaKnown RBP22.35■■□□□ 1.17
POLR1D-204ENST00000465887 EIF4G2P78344 907 aaKnown RBP eCLIP22.34■■□□□ 1.17
POLR1D-204ENST00000465887 ARHGEF28Q8N1W1 1705 aaKnown RBP22.33■■□□□ 1.17
POLR1D-204ENST00000465887 SCAF11Q99590 1463 aaKnown RBP22.33■■□□□ 1.17
POLR1D-204ENST00000465887 TXNDC2Q86VQ3 553 aa22.31■■□□□ 1.16
POLR1D-204ENST00000465887 PLEKHG1Q9ULL1 1385 aa22.3■■□□□ 1.16
POLR1D-204ENST00000465887 HDGFP51858 240 aaKnown RBP22.3■■□□□ 1.16
POLR1D-204ENST00000465887 ADAMTS13Q76LX8 1427 aa22.28■■□□□ 1.16
POLR1D-204ENST00000465887 TMEM132EQ6IEE7 984 aa22.28■■□□□ 1.16
POLR1D-204ENST00000465887 EID1Q9Y6B2 187 aa22.28■■□□□ 1.16
POLR1D-204ENST00000465887 LMTK3Q96Q04 1460 aa22.27■■□□□ 1.16
POLR1D-204ENST00000465887 QRICH2Q9H0J4 1663 aa22.26■■□□□ 1.15
POLR1D-204ENST00000465887 KNDC1Q76NI1 1749 aa22.26■■□□□ 1.15
POLR1D-204ENST00000465887 MED14O60244 1454 aa22.26■■□□□ 1.15
POLR1D-204ENST00000465887 DIP2AQ14689 1571 aa22.25■■□□□ 1.15
POLR1D-204ENST00000465887 ST20-MTHFSA0A0A6YYL1 179 aa22.23■■□□□ 1.15
POLR1D-204ENST00000465887 METP08581 1390 aa22.22■■□□□ 1.15
POLR1D-204ENST00000465887 YTHDC2Q9H6S0 1430 aaKnown RBP22.22■■□□□ 1.15
POLR1D-204ENST00000465887 STRCQ7RTU9 1775 aa22.21■■□□□ 1.15
POLR1D-204ENST00000465887 ANKLE2Q86XL3 938 aa22.21■■□□□ 1.15
POLR1D-204ENST00000465887 BCANQ96GW7 911 aa22.21■■□□□ 1.15
POLR1D-204ENST00000465887 TRAK1Q9UPV9 953 aa22.19■■□□□ 1.14
POLR1D-204ENST00000465887 CHD2O14647 1828 aaKnown RBP22.19■■□□□ 1.14
POLR1D-204ENST00000465887 EIF3AQ14152 1382 aaKnown RBP22.18■■□□□ 1.14
POLR1D-204ENST00000465887 C11orf95C9JLR9 678 aaPredicted RBP22.18■■□□□ 1.14
POLR1D-204ENST00000465887 SLC26A8Q96RN1 970 aa22.18■■□□□ 1.14
POLR1D-204ENST00000465887 HSPA2P54652 639 aa22.17■■□□□ 1.14
POLR1D-204ENST00000465887 NPHP4O75161 1426 aaPredicted RBP22.16■■□□□ 1.14
POLR1D-204ENST00000465887 XRN1Q8IZH2 1706 aaKnown RBP22.16■■□□□ 1.14
POLR1D-204ENST00000465887 NCKAP5LQ9HCH0 1330 aa22.16■■□□□ 1.14
POLR1D-204ENST00000465887 TESK2Q96S53 571 aa22.16■■□□□ 1.14
POLR1D-204ENST00000465887 STK26Q9P289 416 aa22.16■■□□□ 1.14
POLR1D-204ENST00000465887 DLC1Q96QB1 1528 aa22.16■■□□□ 1.14
POLR1D-204ENST00000465887 LRPPRCP42704 1394 aaKnown RBP22.15■■□□□ 1.14
POLR1D-204ENST00000465887 CPS1P31327 1500 aa22.15■■□□□ 1.14
POLR1D-204ENST00000465887 PTPRUQ92729 1446 aa22.14■■□□□ 1.13
POLR1D-204ENST00000465887 WASHC2AQ641Q2 1341 aa22.14■■□□□ 1.13
POLR1D-204ENST00000465887 TBX22Q9Y458 520 aa22.12■■□□□ 1.13
POLR1D-204ENST00000465887 TECPR2O15040 1411 aa22.11■■□□□ 1.13
POLR1D-204ENST00000465887 CCDC7Q96M83 1385 aa22.11■■□□□ 1.13
POLR1D-204ENST00000465887 DISP3Q9P2K9 1392 aa22.11■■□□□ 1.13
POLR1D-204ENST00000465887 CENPJQ9HC77 1338 aaPredicted RBP22.11■■□□□ 1.13
POLR1D-204ENST00000465887 ABCC11Q96J66 1382 aa22.1■■□□□ 1.13
POLR1D-204ENST00000465887 CENPBP07199 599 aaPredicted RBP22.1■■□□□ 1.13
POLR1D-204ENST00000465887 KIF7Q2M1P5 1343 aa22.1■■□□□ 1.13
POLR1D-204ENST00000465887 SBNO2Q9Y2G9 1366 aa22.08■■□□□ 1.12
POLR1D-204ENST00000465887 GTF3C3Q9Y5Q9 886 aa22.07■■□□□ 1.12
POLR1D-204ENST00000465887 PLEKHH1Q9ULM0 1364 aa22.07■■□□□ 1.12
POLR1D-204ENST00000465887 MYOM1P52179 1685 aa22.06■■□□□ 1.12
POLR1D-204ENST00000465887 STRCP1A6NGW2 1772 aa22.06■■□□□ 1.12
POLR1D-204ENST00000465887 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.06■■□□□ 1.12
POLR1D-204ENST00000465887 TULP4Q9NRJ4 1543 aa22.06■■□□□ 1.12
POLR1D-204ENST00000465887 PRAM1Q96QH2 718 aa22.06■■□□□ 1.12
POLR1D-204ENST00000465887 PIK3R4Q99570 1358 aa22.05■■□□□ 1.12
POLR1D-204ENST00000465887 ROBO2Q9HCK4 1378 aa22.05■■□□□ 1.12
POLR1D-204ENST00000465887 NWD1Q149M9 1564 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms