RNA–Protein interactions for RNA: ENST00000465882.5

KPNA1-203, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 3

Gene KPNA1, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-203ENST00000465882 MSH6P52701 1360 aa17.85■□□□□ 0.45
KPNA1-203ENST00000465882 ZFYVE9O95405 1425 aa17.84■□□□□ 0.45
KPNA1-203ENST00000465882 HDGFP51858 240 aaKnown RBP17.84■□□□□ 0.45
KPNA1-203ENST00000465882 RBM33Q96EV2 1170 aaKnown RBP17.84■□□□□ 0.45
KPNA1-203ENST00000465882 ANKRD50Q9ULJ7 1429 aa17.83■□□□□ 0.45
KPNA1-203ENST00000465882 PLEKHG1Q9ULL1 1385 aa17.83■□□□□ 0.45
KPNA1-203ENST00000465882 POTEAQ6S8J7 498 aa17.83■□□□□ 0.44
KPNA1-203ENST00000465882 BCANQ96GW7 911 aa17.83■□□□□ 0.44
KPNA1-203ENST00000465882 SLAIN2Q9P270 581 aa17.83■□□□□ 0.44
KPNA1-203ENST00000465882 CHD2O14647 1828 aaKnown RBP17.82■□□□□ 0.44
KPNA1-203ENST00000465882 MYO5BQ9ULV0 1848 aa17.8■□□□□ 0.44
KPNA1-203ENST00000465882 TBX22Q9Y458 520 aa17.8■□□□□ 0.44
KPNA1-203ENST00000465882 RIMS2Q9UQ26 1411 aa17.8■□□□□ 0.44
KPNA1-203ENST00000465882 NCOA3Q9Y6Q9 1424 aa17.8■□□□□ 0.44
KPNA1-203ENST00000465882 TMEM131LA2VDJ0 1609 aa17.79■□□□□ 0.44
KPNA1-203ENST00000465882 JCADQ9P266 1359 aa17.79■□□□□ 0.44
KPNA1-203ENST00000465882 PHLPP1O60346 1717 aa17.78■□□□□ 0.44
KPNA1-203ENST00000465882 PPP1R15AO75807 674 aaPredicted RBP17.78■□□□□ 0.44
KPNA1-203ENST00000465882 GCC2Q8IWJ2 1684 aa17.77■□□□□ 0.44
KPNA1-203ENST00000465882 FAM50AQ14320 339 aaKnown RBP17.77■□□□□ 0.44
KPNA1-203ENST00000465882 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.77■□□□□ 0.44
KPNA1-203ENST00000465882 UNC13BO14795 1591 aa17.74■□□□□ 0.43
KPNA1-203ENST00000465882 PIK3R4Q99570 1358 aa17.74■□□□□ 0.43
KPNA1-203ENST00000465882 COL16A1Q07092 1604 aaPredicted RBP17.73■□□□□ 0.43
KPNA1-203ENST00000465882 ADAMTS13Q76LX8 1427 aa17.72■□□□□ 0.43
KPNA1-203ENST00000465882 DIP2AQ14689 1571 aa17.72■□□□□ 0.43
KPNA1-203ENST00000465882 CADPS2Q86UW7 1296 aa17.71■□□□□ 0.43
KPNA1-203ENST00000465882 C19orf44Q9H6X5 657 aa17.71■□□□□ 0.43
KPNA1-203ENST00000465882 SPATA31A6Q5VVP1 1343 aa17.71■□□□□ 0.42
KPNA1-203ENST00000465882 E9PCH4 1651 aa17.71■□□□□ 0.42
KPNA1-203ENST00000465882 CHGAP10645 457 aaKnown RBP17.7■□□□□ 0.42
KPNA1-203ENST00000465882 ROCK1Q13464 1354 aa17.69■□□□□ 0.42
KPNA1-203ENST00000465882 C14orf37Q86TY3 774 aa17.69■□□□□ 0.42
KPNA1-203ENST00000465882 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.69■□□□□ 0.42
KPNA1-203ENST00000465882 AHDC1Q5TGY3 1603 aaPredicted RBP17.69■□□□□ 0.42
KPNA1-203ENST00000465882 IQGAP3Q86VI3 1631 aa17.68■□□□□ 0.42
KPNA1-203ENST00000465882 ATF3P18847 181 aa17.67■□□□□ 0.42
KPNA1-203ENST00000465882 LRP6O75581 1613 aa17.66■□□□□ 0.42
KPNA1-203ENST00000465882 ZNF772Q68DY9 489 aaPredicted RBP17.66■□□□□ 0.42
KPNA1-203ENST00000465882 SETD1AO15047 1707 aaKnown RBP17.66■□□□□ 0.42
KPNA1-203ENST00000465882 TRPM2O94759 1503 aa17.66■□□□□ 0.42
KPNA1-203ENST00000465882 NUTM2DQ5VT03 806 aaPredicted RBP17.65■□□□□ 0.42
KPNA1-203ENST00000465882 SHPRHQ149N8 1683 aa17.64■□□□□ 0.42
KPNA1-203ENST00000465882 AMOTL2Q9Y2J4 779 aa17.64■□□□□ 0.41
KPNA1-203ENST00000465882 MEX3CQ5U5Q3 659 aaKnown RBP17.63■□□□□ 0.41
KPNA1-203ENST00000465882 DCCP43146 1447 aa17.63■□□□□ 0.41
KPNA1-203ENST00000465882 NUP155O75694 1391 aa17.62■□□□□ 0.41
KPNA1-203ENST00000465882 PTPRUQ92729 1446 aa17.62■□□□□ 0.41
KPNA1-203ENST00000465882 BRINP3Q76B58 766 aa17.61■□□□□ 0.41
KPNA1-203ENST00000465882 XRN1Q8IZH2 1706 aaKnown RBP17.58■□□□□ 0.41
KPNA1-203ENST00000465882 SETBP1Q9Y6X0 1596 aa17.58■□□□□ 0.41
KPNA1-203ENST00000465882 NRXN3Q9Y4C0 1643 aa17.58■□□□□ 0.4
KPNA1-203ENST00000465882 UPF1Q92900 1129 aaKnown RBP eCLIP17.57■□□□□ 0.4
KPNA1-203ENST00000465882 SETD5Q9C0A6 1442 aa17.56■□□□□ 0.4
KPNA1-203ENST00000465882 RXRBP28702 533 aa17.56■□□□□ 0.4
KPNA1-203ENST00000465882 ASXL1Q8IXJ9 1541 aa17.56■□□□□ 0.4
KPNA1-203ENST00000465882 TRIM52Q96A61 297 aa17.55■□□□□ 0.4
KPNA1-203ENST00000465882 CDK12Q9NYV4 1490 aaPredicted RBP17.55■□□□□ 0.4
KPNA1-203ENST00000465882 SPHKAPQ2M3C7 1700 aa17.55■□□□□ 0.4
KPNA1-203ENST00000465882 MST1RQ04912 1400 aa17.55■□□□□ 0.4
KPNA1-203ENST00000465882 NHSL1Q5SYE7 1610 aa17.54■□□□□ 0.4
KPNA1-203ENST00000465882 METP08581 1390 aa17.53■□□□□ 0.4
KPNA1-203ENST00000465882 NUTM2BA6NNL0 878 aaPredicted RBP17.52■□□□□ 0.4
KPNA1-203ENST00000465882 NUTM2EB1AL46 878 aaPredicted RBP17.52■□□□□ 0.4
KPNA1-203ENST00000465882 NUTM2AQ8IVF1 878 aaPredicted RBP17.52■□□□□ 0.4
KPNA1-203ENST00000465882 LRRC59Q96AG4 307 aaKnown RBP17.52■□□□□ 0.4
KPNA1-203ENST00000465882 ZNF326Q5BKZ1 582 aaKnown RBP17.51■□□□□ 0.39
KPNA1-203ENST00000465882 ADGRL3Q9HAR2 1447 aa17.51■□□□□ 0.39
KPNA1-203ENST00000465882 AFF2P51816 1311 aa17.5■□□□□ 0.39
KPNA1-203ENST00000465882 ITGAEP38570 1179 aa17.49■□□□□ 0.39
KPNA1-203ENST00000465882 NEXMIFQ5QGS0 1516 aa17.47■□□□□ 0.39
KPNA1-203ENST00000465882 PNPLA6Q8IY17 1366 aa17.47■□□□□ 0.39
KPNA1-203ENST00000465882 NALCNQ8IZF0 1738 aa17.45■□□□□ 0.38
KPNA1-203ENST00000465882 CLTCL1P53675 1640 aa17.45■□□□□ 0.38
KPNA1-203ENST00000465882 RBM6P78332 1123 aaKnown RBP17.44■□□□□ 0.38
KPNA1-203ENST00000465882 KIF1BO60333 1816 aa17.44■□□□□ 0.38
KPNA1-203ENST00000465882 C1orf167Q5SNV9 1468 aa17.44■□□□□ 0.38
KPNA1-203ENST00000465882 LAMC1P11047 1609 aa17.43■□□□□ 0.38
KPNA1-203ENST00000465882 DDX17Q92841 729 aaKnown RBP17.43■□□□□ 0.38
KPNA1-203ENST00000465882 C8orf37Q96NL8 207 aa17.43■□□□□ 0.38
KPNA1-203ENST00000465882 QTRT2Q9H974 415 aaKnown RBP17.43■□□□□ 0.38
KPNA1-203ENST00000465882 PTCH1Q13635 1447 aa17.43■□□□□ 0.38
KPNA1-203ENST00000465882 PRAG1Q86YV5 1406 aa17.41■□□□□ 0.38
KPNA1-203ENST00000465882 RGS12O14924 1447 aa17.4■□□□□ 0.38
KPNA1-203ENST00000465882 VGFO15240 615 aaPredicted RBP17.4■□□□□ 0.38
KPNA1-203ENST00000465882 SOS2Q07890 1332 aaPredicted RBP17.4■□□□□ 0.38
KPNA1-203ENST00000465882 NGLY1Q96IV0 654 aa17.38■□□□□ 0.37
KPNA1-203ENST00000465882 RPGRIP1LQ68CZ1 1315 aa17.38■□□□□ 0.37
KPNA1-203ENST00000465882 ROBO2Q9HCK4 1378 aa17.38■□□□□ 0.37
KPNA1-203ENST00000465882 NAIPQ13075 1403 aa17.37■□□□□ 0.37
KPNA1-203ENST00000465882 ADAMTS2O95450 1211 aa17.36■□□□□ 0.37
KPNA1-203ENST00000465882 ORAI2Q96SN7 254 aa17.36■□□□□ 0.37
KPNA1-203ENST00000465882 PPARGC1BQ86YN6 1023 aaKnown RBP17.35■□□□□ 0.37
KPNA1-203ENST00000465882 HFM1A2PYH4 1435 aa17.35■□□□□ 0.37
KPNA1-203ENST00000465882 RRBP1Q9P2E9 1410 aaKnown RBP17.35■□□□□ 0.37
KPNA1-203ENST00000465882 FNBP4Q8N3X1 1017 aaPredicted RBP17.34■□□□□ 0.37
KPNA1-203ENST00000465882 USP21Q9UK80 565 aa17.33■□□□□ 0.36
KPNA1-203ENST00000465882 TRPC5Q9UL62 973 aaPredicted RBP17.33■□□□□ 0.36
KPNA1-203ENST00000465882 COL22A1Q8NFW1 1626 aaPredicted RBP17.32■□□□□ 0.36
KPNA1-203ENST00000465882 ATAD2Q6PL18 1390 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms