RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 FAM161AQ3B820 660 aa9.1□□□□□ -0.95
EXOSC3-204ENST00000465860 ADGRG1Q9Y653 693 aa9.1□□□□□ -0.95
EXOSC3-204ENST00000465860 NCAPD3P42695 1498 aa9.09□□□□□ -0.95
EXOSC3-204ENST00000465860 APLP1P51693 650 aa9.09□□□□□ -0.95
EXOSC3-204ENST00000465860 TJAP1Q5JTD0 557 aa9.09□□□□□ -0.95
EXOSC3-204ENST00000465860 RGS20O76081 388 aa9.08□□□□□ -0.96
EXOSC3-204ENST00000465860 SLF2Q8IX21 1173 aa9.08□□□□□ -0.96
EXOSC3-204ENST00000465860 RBM46Q8TBY0 533 aaKnown RBP9.08□□□□□ -0.96
EXOSC3-204ENST00000465860 PEG3Q9GZU2 1588 aa9.07□□□□□ -0.96
EXOSC3-204ENST00000465860 SMYD5Q6GMV2 418 aa9.07□□□□□ -0.96
EXOSC3-204ENST00000465860 MTRQ99707 1265 aa9.07□□□□□ -0.96
EXOSC3-204ENST00000465860 SMARCA2P51531 1590 aa9.07□□□□□ -0.96
EXOSC3-204ENST00000465860 DNAJB2P25686 324 aa9.06□□□□□ -0.96
EXOSC3-204ENST00000465860 WIZO95785 1651 aa9.06□□□□□ -0.96
EXOSC3-204ENST00000465860 HMGXB3Q12766 1538 aa9.05□□□□□ -0.96
EXOSC3-204ENST00000465860 RCCD1A6NED2 376 aa9.05□□□□□ -0.96
EXOSC3-204ENST00000465860 HIC1Q14526 733 aa9.05□□□□□ -0.96
EXOSC3-204ENST00000465860 TMEM134Q9H6X4 195 aa9.05□□□□□ -0.96
EXOSC3-204ENST00000465860 GPR37O15354 613 aa9.04□□□□□ -0.96
EXOSC3-204ENST00000465860 VSIG10Q8N0Z9 540 aa9.04□□□□□ -0.96
EXOSC3-204ENST00000465860 NECTIN2Q92692 538 aa9.04□□□□□ -0.96
EXOSC3-204ENST00000465860 IL21Q9HBE4 155 aa9.04□□□□□ -0.96
EXOSC3-204ENST00000465860 FECHP22830 423 aa9.03□□□□□ -0.96
EXOSC3-204ENST00000465860 ZNF516Q92618 1163 aa9.03□□□□□ -0.96
EXOSC3-204ENST00000465860 BAZ1BQ9UIG0 1483 aaKnown RBP9.02□□□□□ -0.96
EXOSC3-204ENST00000465860 SLC4A3P48751 1232 aa9.02□□□□□ -0.97
EXOSC3-204ENST00000465860 GNPATO15228 680 aa9.01□□□□□ -0.97
EXOSC3-204ENST00000465860 PXYLP1Q8TE99 480 aa9.01□□□□□ -0.97
EXOSC3-204ENST00000465860 OATP04181 439 aa9□□□□□ -0.97
EXOSC3-204ENST00000465860 COPS2P61201 443 aa9□□□□□ -0.97
EXOSC3-204ENST00000465860 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.99□□□□□ -0.97
EXOSC3-204ENST00000465860 METTL3Q86U44 580 aaKnown RBP8.98□□□□□ -0.97
EXOSC3-204ENST00000465860 NKX2-3Q8TAU0 364 aa8.98□□□□□ -0.97
EXOSC3-204ENST00000465860 NESP48681 1621 aa8.98□□□□□ -0.97
EXOSC3-204ENST00000465860 RSF1Q96T23 1441 aaPredicted RBP8.97□□□□□ -0.97
EXOSC3-204ENST00000465860 SLC10A3P09131 477 aa8.97□□□□□ -0.97
EXOSC3-204ENST00000465860 PPP1R18Q6NYC8 613 aa8.96□□□□□ -0.98
EXOSC3-204ENST00000465860 GPIHBP1Q8IV16 184 aa8.96□□□□□ -0.98
EXOSC3-204ENST00000465860 PRR14Q9BWN1 585 aa8.96□□□□□ -0.98
EXOSC3-204ENST00000465860 IRX2Q9BZI1 471 aaPredicted RBP8.96□□□□□ -0.98
EXOSC3-204ENST00000465860 PCDHB3Q9Y5E6 796 aa8.96□□□□□ -0.98
EXOSC3-204ENST00000465860 CFHP08603 1231 aa8.95□□□□□ -0.98
EXOSC3-204ENST00000465860 BLOC1S3Q6QNY0 202 aa8.95□□□□□ -0.98
EXOSC3-204ENST00000465860 ACTN4O43707 911 aaKnown RBP8.94□□□□□ -0.98
EXOSC3-204ENST00000465860 ZPR1O75312 459 aa8.94□□□□□ -0.98
EXOSC3-204ENST00000465860 KMT5BQ4FZB7 885 aa8.93□□□□□ -0.98
EXOSC3-204ENST00000465860 NLRP7Q8WX94 980 aa8.92□□□□□ -0.98
EXOSC3-204ENST00000465860 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.92□□□□□ -0.98
EXOSC3-204ENST00000465860 PHOX2BQ99453 314 aa8.91□□□□□ -0.98
EXOSC3-204ENST00000465860 KIF21AQ7Z4S6 1674 aa8.89□□□□□ -0.99
EXOSC3-204ENST00000465860 TLL1O43897 1013 aa8.89□□□□□ -0.99
EXOSC3-204ENST00000465860 PRKD2Q9BZL6 878 aa8.89□□□□□ -0.99
EXOSC3-204ENST00000465860 DAXXQ9UER7 740 aaPredicted RBP8.89□□□□□ -0.99
EXOSC3-204ENST00000465860 TOP2AP11388 1531 aaKnown RBP8.89□□□□□ -0.99
EXOSC3-204ENST00000465860 LAMC3Q9Y6N6 1575 aa8.86□□□□□ -0.99
EXOSC3-204ENST00000465860 DDX11L8A8MPP1 907 aa8.86□□□□□ -0.99
EXOSC3-204ENST00000465860 TULP1O00294 542 aaPredicted RBP8.86□□□□□ -0.99
EXOSC3-204ENST00000465860 GGCXP38435 758 aa8.86□□□□□ -0.99
EXOSC3-204ENST00000465860 RSPH4AQ5TD94 716 aa8.86□□□□□ -0.99
EXOSC3-204ENST00000465860 ERCC6Q03468 1493 aa8.85□□□□□ -0.99
EXOSC3-204ENST00000465860 PUS10Q3MIT2 529 aaKnown RBP8.85□□□□□ -0.99
EXOSC3-204ENST00000465860 RDH13Q8NBN7 331 aa8.85□□□□□ -0.99
EXOSC3-204ENST00000465860 TMUB1Q9BVT8 246 aa8.85□□□□□ -0.99
EXOSC3-204ENST00000465860 MAP2K5Q13163 448 aa8.84□□□□□ -0.99
EXOSC3-204ENST00000465860 V9GY48 417 aaPredicted RBP8.84□□□□□ -0.99
EXOSC3-204ENST00000465860 THOC2Q8NI27 1593 aaKnown RBP8.83□□□□□ -1
EXOSC3-204ENST00000465860 RNF223E7ERA6 249 aa8.83□□□□□ -1
EXOSC3-204ENST00000465860 NR1I2O75469 434 aa8.83□□□□□ -1
EXOSC3-204ENST00000465860 SCUBE3Q8IX30 993 aa8.83□□□□□ -1
EXOSC3-204ENST00000465860 CADPSQ9ULU8 1353 aa8.82□□□□□ -1
EXOSC3-204ENST00000465860 IRF6O14896 467 aa8.81□□□□□ -1
EXOSC3-204ENST00000465860 S1PR4O95977 384 aa8.81□□□□□ -1
EXOSC3-204ENST00000465860 ADH1BP00325 375 aa8.81□□□□□ -1
EXOSC3-204ENST00000465860 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.81□□□□□ -1
EXOSC3-204ENST00000465860 SULF1Q8IWU6 871 aa8.81□□□□□ -1
EXOSC3-204ENST00000465860 CCDC88BA6NC98 1476 aa8.81□□□□□ -1
EXOSC3-204ENST00000465860 PPEF1O14829 653 aaPredicted RBP8.8□□□□□ -1
EXOSC3-204ENST00000465860 GFRA3O60609 400 aa8.8□□□□□ -1
EXOSC3-204ENST00000465860 GCGRP47871 477 aa8.8□□□□□ -1
EXOSC3-204ENST00000465860 FUT2Q10981 343 aa8.8□□□□□ -1
EXOSC3-204ENST00000465860 MINK1Q8N4C8 1332 aaPredicted RBP8.8□□□□□ -1
EXOSC3-204ENST00000465860 MORN1Q5T089 497 aa8.79□□□□□ -1
EXOSC3-204ENST00000465860 EMID1Q96A84 441 aaPredicted RBP8.79□□□□□ -1
EXOSC3-204ENST00000465860 ATP6V1AP38606 617 aa8.78□□□□□ -1
EXOSC3-204ENST00000465860 Q6ZNB5 142 aa8.78□□□□□ -1
EXOSC3-204ENST00000465860 SLC6A16Q9GZN6 736 aa8.78□□□□□ -1
EXOSC3-204ENST00000465860 CFTRP13569 1480 aa8.77□□□□□ -1
EXOSC3-204ENST00000465860 PRDM2Q13029 1718 aa8.77□□□□□ -1
EXOSC3-204ENST00000465860 LAPTM4AQ15012 233 aa8.77□□□□□ -1.01
EXOSC3-204ENST00000465860 ANKLE1Q8NAG6 615 aa8.77□□□□□ -1.01
EXOSC3-204ENST00000465860 CCDC102AQ96A19 550 aa8.77□□□□□ -1.01
EXOSC3-204ENST00000465860 SPSB2Q99619 263 aa8.77□□□□□ -1.01
EXOSC3-204ENST00000465860 CUX2O14529 1486 aa8.77□□□□□ -1.01
EXOSC3-204ENST00000465860 SLC19A1P41440 591 aa8.76□□□□□ -1.01
EXOSC3-204ENST00000465860 MDM2Q00987 491 aaPredicted RBP8.76□□□□□ -1.01
EXOSC3-204ENST00000465860 LMOD2Q6P5Q4 547 aa8.76□□□□□ -1.01
EXOSC3-204ENST00000465860 SLC27A5Q9Y2P5 690 aa8.76□□□□□ -1.01
EXOSC3-204ENST00000465860 PDS5BQ9NTI5 1447 aa8.76□□□□□ -1.01
EXOSC3-204ENST00000465860 CD46P15529 392 aa8.75□□□□□ -1.01
EXOSC3-204ENST00000465860 THAP11Q96EK4 314 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms