RNA–Protein interactions for RNA: ENST00000465405.1

GABRE-205, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-205ENST00000465405 UBAP1LF5GYI3 381 aa13.38□□□□□ -0.27
GABRE-205ENST00000465405 SLC52A1Q9NWF4 448 aa13.38□□□□□ -0.27
GABRE-205ENST00000465405 EID1Q9Y6B2 187 aa13.38□□□□□ -0.27
GABRE-205ENST00000465405 MYO5BQ9ULV0 1848 aa13.37□□□□□ -0.27
GABRE-205ENST00000465405 TMEM131LA2VDJ0 1609 aa13.35□□□□□ -0.27
GABRE-205ENST00000465405 NAIPQ13075 1403 aa13.35□□□□□ -0.27
GABRE-205ENST00000465405 LRRC7Q96NW7 1537 aa13.34□□□□□ -0.27
GABRE-205ENST00000465405 CHGAP10645 457 aaKnown RBP13.33□□□□□ -0.28
GABRE-205ENST00000465405 ZFYVE9O95405 1425 aa13.32□□□□□ -0.28
GABRE-205ENST00000465405 SLC26A8Q96RN1 970 aa13.32□□□□□ -0.28
GABRE-205ENST00000465405 ALKQ9UM73 1620 aa13.31□□□□□ -0.28
GABRE-205ENST00000465405 RIMS2Q9UQ26 1411 aa13.3□□□□□ -0.28
GABRE-205ENST00000465405 PIP4K2BP78356 416 aa13.3□□□□□ -0.28
GABRE-205ENST00000465405 SPHKAPQ2M3C7 1700 aa13.3□□□□□ -0.28
GABRE-205ENST00000465405 HFM1A2PYH4 1435 aa13.3□□□□□ -0.28
GABRE-205ENST00000465405 TOM1O60784 492 aa13.29□□□□□ -0.28
GABRE-205ENST00000465405 NUTM2DQ5VT03 806 aaPredicted RBP13.29□□□□□ -0.28
GABRE-205ENST00000465405 XIRP1Q702N8 1843 aaKnown RBP13.29□□□□□ -0.28
GABRE-205ENST00000465405 BCANQ96GW7 911 aa13.28□□□□□ -0.28
GABRE-205ENST00000465405 PPP1R15AO75807 674 aaPredicted RBP13.27□□□□□ -0.29
GABRE-205ENST00000465405 HOXD11P31277 338 aaPredicted RBP13.27□□□□□ -0.29
GABRE-205ENST00000465405 TRIM52Q96A61 297 aa13.27□□□□□ -0.29
GABRE-205ENST00000465405 PLEKHG1Q9ULL1 1385 aa13.27□□□□□ -0.29
GABRE-205ENST00000465405 KCNA6P17658 529 aa13.26□□□□□ -0.29
GABRE-205ENST00000465405 HDGFP51858 240 aaKnown RBP13.25□□□□□ -0.29
GABRE-205ENST00000465405 RBM33Q96EV2 1170 aaKnown RBP13.25□□□□□ -0.29
GABRE-205ENST00000465405 CLTCL1P53675 1640 aa13.24□□□□□ -0.29
GABRE-205ENST00000465405 HSPA1LP34931 641 aa13.24□□□□□ -0.29
GABRE-205ENST00000465405 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.24□□□□□ -0.29
GABRE-205ENST00000465405 NWD1Q149M9 1564 aa13.24□□□□□ -0.29
GABRE-205ENST00000465405 TRPM2O94759 1503 aa13.23□□□□□ -0.29
GABRE-205ENST00000465405 TMEM94Q12767 1356 aa13.23□□□□□ -0.29
GABRE-205ENST00000465405 PROSER2Q86WR7 435 aaPredicted RBP13.23□□□□□ -0.29
GABRE-205ENST00000465405 CHD2O14647 1828 aaKnown RBP13.23□□□□□ -0.29
GABRE-205ENST00000465405 ADAMTS13Q76LX8 1427 aa13.22□□□□□ -0.29
GABRE-205ENST00000465405 SLC4A1APQ9BWU0 796 aaKnown RBP13.22□□□□□ -0.29
GABRE-205ENST00000465405 DISP3Q9P2K9 1392 aa13.21□□□□□ -0.29
GABRE-205ENST00000465405 TBX22Q9Y458 520 aa13.21□□□□□ -0.29
GABRE-205ENST00000465405 NKTRP30414 1462 aaKnown RBP13.21□□□□□ -0.3
GABRE-205ENST00000465405 ZNF326Q5BKZ1 582 aaKnown RBP13.2□□□□□ -0.3
GABRE-205ENST00000465405 KIF1BO60333 1816 aa13.19□□□□□ -0.3
GABRE-205ENST00000465405 NRXN3Q9Y4C0 1643 aa13.19□□□□□ -0.3
GABRE-205ENST00000465405 DIP2AQ14689 1571 aa13.19□□□□□ -0.3
GABRE-205ENST00000465405 NEXMIFQ5QGS0 1516 aa13.18□□□□□ -0.3
GABRE-205ENST00000465405 PTPRUQ92729 1446 aa13.16□□□□□ -0.3
GABRE-205ENST00000465405 SETBP1Q9Y6X0 1596 aa13.15□□□□□ -0.3
GABRE-205ENST00000465405 MPHOSPH9Q99550 1183 aa13.15□□□□□ -0.3
GABRE-205ENST00000465405 PIK3R4Q99570 1358 aa13.15□□□□□ -0.3
GABRE-205ENST00000465405 ILDR2Q71H61 639 aa13.14□□□□□ -0.31
GABRE-205ENST00000465405 AMOTL2Q9Y2J4 779 aa13.14□□□□□ -0.31
GABRE-205ENST00000465405 MSH6P52701 1360 aa13.14□□□□□ -0.31
GABRE-205ENST00000465405 SETD5Q9C0A6 1442 aa13.13□□□□□ -0.31
GABRE-205ENST00000465405 METP08581 1390 aa13.13□□□□□ -0.31
GABRE-205ENST00000465405 FAM135BQ49AJ0 1406 aa13.13□□□□□ -0.31
GABRE-205ENST00000465405 ROBO1Q9Y6N7 1651 aa13.12□□□□□ -0.31
GABRE-205ENST00000465405 XRN1Q8IZH2 1706 aaKnown RBP13.12□□□□□ -0.31
GABRE-205ENST00000465405 MED1Q15648 1581 aaPredicted RBP13.11□□□□□ -0.31
GABRE-205ENST00000465405 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.1□□□□□ -0.31
GABRE-205ENST00000465405 RAB3GAP2Q9H2M9 1393 aa13.1□□□□□ -0.31
GABRE-205ENST00000465405 PPLO60437 1756 aa13.1□□□□□ -0.31
GABRE-205ENST00000465405 C14orf37Q86TY3 774 aa13.1□□□□□ -0.31
GABRE-205ENST00000465405 SLAIN2Q9P270 581 aa13.1□□□□□ -0.31
GABRE-205ENST00000465405 NCOA3Q9Y6Q9 1424 aa13.1□□□□□ -0.31
GABRE-205ENST00000465405 CCDC144AA2RUR9 1427 aa13.09□□□□□ -0.31
GABRE-205ENST00000465405 SETD1AO15047 1707 aaKnown RBP13.09□□□□□ -0.31
GABRE-205ENST00000465405 VGFO15240 615 aaPredicted RBP13.09□□□□□ -0.31
GABRE-205ENST00000465405 RPGRIP1LQ68CZ1 1315 aa13.09□□□□□ -0.31
GABRE-205ENST00000465405 RGL3Q3MIN7 710 aa13.08□□□□□ -0.32
GABRE-205ENST00000465405 SPATA31E1Q6ZUB1 1445 aa13.07□□□□□ -0.32
GABRE-205ENST00000465405 C19orf44Q9H6X5 657 aa13.07□□□□□ -0.32
GABRE-205ENST00000465405 IFT172Q9UG01 1749 aa13.05□□□□□ -0.32
GABRE-205ENST00000465405 ATF3P18847 181 aa13.05□□□□□ -0.32
GABRE-205ENST00000465405 CADPS2Q86UW7 1296 aa13.05□□□□□ -0.32
GABRE-205ENST00000465405 ADGRF5Q8IZF2 1346 aa13.05□□□□□ -0.32
GABRE-205ENST00000465405 ACIN1Q9UKV3 1341 aaKnown RBP13.04□□□□□ -0.32
GABRE-205ENST00000465405 PHLPP1O60346 1717 aa13.04□□□□□ -0.32
GABRE-205ENST00000465405 NALCNQ8IZF0 1738 aa13.03□□□□□ -0.32
GABRE-205ENST00000465405 ROBO2Q9HCK4 1378 aa13.02□□□□□ -0.33
GABRE-205ENST00000465405 DCCP43146 1447 aa13.01□□□□□ -0.33
GABRE-205ENST00000465405 ADGRL3Q9HAR2 1447 aa13.01□□□□□ -0.33
GABRE-205ENST00000465405 COL16A1Q07092 1604 aaPredicted RBP13.01□□□□□ -0.33
GABRE-205ENST00000465405 MST1RQ04912 1400 aa13□□□□□ -0.33
GABRE-205ENST00000465405 PTCH1Q13635 1447 aa13□□□□□ -0.33
GABRE-205ENST00000465405 ANKRD30BQ9BXX2 1392 aa13□□□□□ -0.33
GABRE-205ENST00000465405 BRINP3Q76B58 766 aa13□□□□□ -0.33
GABRE-205ENST00000465405 AHDC1Q5TGY3 1603 aaPredicted RBP12.99□□□□□ -0.33
GABRE-205ENST00000465405 ASXL1Q8IXJ9 1541 aa12.98□□□□□ -0.33
GABRE-205ENST00000465405 PIK3C2GO75747 1445 aa12.98□□□□□ -0.33
GABRE-205ENST00000465405 PRAG1Q86YV5 1406 aa12.98□□□□□ -0.33
GABRE-205ENST00000465405 SOCS7O14512 581 aa12.98□□□□□ -0.33
GABRE-205ENST00000465405 TMEM132EQ6IEE7 984 aa12.98□□□□□ -0.33
GABRE-205ENST00000465405 HRCP23327 699 aa12.97□□□□□ -0.33
GABRE-205ENST00000465405 STK26Q9P289 416 aa12.97□□□□□ -0.33
GABRE-205ENST00000465405 RGS17Q9UGC6 210 aaPredicted RBP12.97□□□□□ -0.33
GABRE-205ENST00000465405 JCADQ9P266 1359 aa12.96□□□□□ -0.33
GABRE-205ENST00000465405 DDX17Q92841 729 aaKnown RBP12.95□□□□□ -0.34
GABRE-205ENST00000465405 NRXN1Q9ULB1 1477 aa12.95□□□□□ -0.34
GABRE-205ENST00000465405 NHSL1Q5SYE7 1610 aa12.95□□□□□ -0.34
GABRE-205ENST00000465405 LRPPRCP42704 1394 aaKnown RBP12.94□□□□□ -0.34
GABRE-205ENST00000465405 MYOM2P54296 1465 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms