RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 SLC26A8Q96RN1 970 aa21.92■■□□□ 1.1
ATG4B-214ENST00000465399 BCANQ96GW7 911 aa21.91■■□□□ 1.1
ATG4B-214ENST00000465399 E9PCH4 1651 aa21.91■■□□□ 1.1
ATG4B-214ENST00000465399 TMEM131LA2VDJ0 1609 aa21.91■■□□□ 1.1
ATG4B-214ENST00000465399 ROBO1Q9Y6N7 1651 aa21.89■■□□□ 1.1
ATG4B-214ENST00000465399 CHD2O14647 1828 aaKnown RBP21.89■■□□□ 1.09
ATG4B-214ENST00000465399 IQGAP3Q86VI3 1631 aa21.88■■□□□ 1.09
ATG4B-214ENST00000465399 PROSER2Q86WR7 435 aaPredicted RBP21.88■■□□□ 1.09
ATG4B-214ENST00000465399 ZFYVE9O95405 1425 aa21.88■■□□□ 1.09
ATG4B-214ENST00000465399 FAM135BQ49AJ0 1406 aa21.88■■□□□ 1.09
ATG4B-214ENST00000465399 ROCK1Q13464 1354 aa21.87■■□□□ 1.09
ATG4B-214ENST00000465399 PPP1R15AO75807 674 aaPredicted RBP21.86■■□□□ 1.09
ATG4B-214ENST00000465399 HDGFP51858 240 aaKnown RBP21.86■■□□□ 1.09
ATG4B-214ENST00000465399 RIMS2Q9UQ26 1411 aa21.86■■□□□ 1.09
ATG4B-214ENST00000465399 PLEKHG1Q9ULL1 1385 aa21.86■■□□□ 1.09
ATG4B-214ENST00000465399 MSH6P52701 1360 aa21.83■■□□□ 1.08
ATG4B-214ENST00000465399 RBM33Q96EV2 1170 aaKnown RBP21.82■■□□□ 1.08
ATG4B-214ENST00000465399 CHGAP10645 457 aaKnown RBP21.8■■□□□ 1.08
ATG4B-214ENST00000465399 DIP2AQ14689 1571 aa21.79■■□□□ 1.08
ATG4B-214ENST00000465399 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.79■■□□□ 1.08
ATG4B-214ENST00000465399 PHLPP1O60346 1717 aa21.77■■□□□ 1.08
ATG4B-214ENST00000465399 NUP155O75694 1391 aa21.76■■□□□ 1.07
ATG4B-214ENST00000465399 ITGAEP38570 1179 aa21.76■■□□□ 1.07
ATG4B-214ENST00000465399 SPHKAPQ2M3C7 1700 aa21.75■■□□□ 1.07
ATG4B-214ENST00000465399 TBX22Q9Y458 520 aa21.75■■□□□ 1.07
ATG4B-214ENST00000465399 ADAMTS13Q76LX8 1427 aa21.72■■□□□ 1.07
ATG4B-214ENST00000465399 NCOA3Q9Y6Q9 1424 aa21.72■■□□□ 1.07
ATG4B-214ENST00000465399 SLAIN2Q9P270 581 aa21.72■■□□□ 1.07
ATG4B-214ENST00000465399 TRPM2O94759 1503 aa21.71■■□□□ 1.07
ATG4B-214ENST00000465399 NUTM2DQ5VT03 806 aaPredicted RBP21.71■■□□□ 1.07
ATG4B-214ENST00000465399 PIK3R4Q99570 1358 aa21.71■■□□□ 1.07
ATG4B-214ENST00000465399 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.7■■□□□ 1.06
ATG4B-214ENST00000465399 RGS17Q9UGC6 210 aaPredicted RBP21.7■■□□□ 1.06
ATG4B-214ENST00000465399 C14orf37Q86TY3 774 aa21.69■■□□□ 1.06
ATG4B-214ENST00000465399 PPARGC1BQ86YN6 1023 aaKnown RBP21.67■■□□□ 1.06
ATG4B-214ENST00000465399 COL16A1Q07092 1604 aaPredicted RBP21.66■■□□□ 1.06
ATG4B-214ENST00000465399 NRXN3Q9Y4C0 1643 aa21.65■■□□□ 1.06
ATG4B-214ENST00000465399 JCADQ9P266 1359 aa21.64■■□□□ 1.06
ATG4B-214ENST00000465399 SETBP1Q9Y6X0 1596 aa21.64■■□□□ 1.05
ATG4B-214ENST00000465399 CADPS2Q86UW7 1296 aa21.63■■□□□ 1.05
ATG4B-214ENST00000465399 KIF1BO60333 1816 aa21.63■■□□□ 1.05
ATG4B-214ENST00000465399 ATF3P18847 181 aa21.62■■□□□ 1.05
ATG4B-214ENST00000465399 C19orf44Q9H6X5 657 aa21.62■■□□□ 1.05
ATG4B-214ENST00000465399 XRN1Q8IZH2 1706 aaKnown RBP21.62■■□□□ 1.05
ATG4B-214ENST00000465399 AMOTL2Q9Y2J4 779 aa21.61■■□□□ 1.05
ATG4B-214ENST00000465399 AHDC1Q5TGY3 1603 aaPredicted RBP21.61■■□□□ 1.05
ATG4B-214ENST00000465399 CLTCL1P53675 1640 aa21.6■■□□□ 1.05
ATG4B-214ENST00000465399 ZNF326Q5BKZ1 582 aaKnown RBP21.6■■□□□ 1.05
ATG4B-214ENST00000465399 PTPRUQ92729 1446 aa21.6■■□□□ 1.05
ATG4B-214ENST00000465399 POTEAQ6S8J7 498 aa21.59■■□□□ 1.05
ATG4B-214ENST00000465399 SHPRHQ149N8 1683 aa21.59■■□□□ 1.05
ATG4B-214ENST00000465399 RRBP1Q9P2E9 1410 aaKnown RBP21.58■■□□□ 1.05
ATG4B-214ENST00000465399 DCCP43146 1447 aa21.56■■□□□ 1.04
ATG4B-214ENST00000465399 NEXMIFQ5QGS0 1516 aa21.55■■□□□ 1.04
ATG4B-214ENST00000465399 SPATA31A6Q5VVP1 1343 aa21.55■■□□□ 1.04
ATG4B-214ENST00000465399 NAIPQ13075 1403 aa21.54■■□□□ 1.04
ATG4B-214ENST00000465399 SETD1AO15047 1707 aaKnown RBP21.53■■□□□ 1.04
ATG4B-214ENST00000465399 LRP6O75581 1613 aa21.51■■□□□ 1.03
ATG4B-214ENST00000465399 ASXL1Q8IXJ9 1541 aa21.5■■□□□ 1.03
ATG4B-214ENST00000465399 METP08581 1390 aa21.5■■□□□ 1.03
ATG4B-214ENST00000465399 NALCNQ8IZF0 1738 aa21.5■■□□□ 1.03
ATG4B-214ENST00000465399 MEX3CQ5U5Q3 659 aaKnown RBP21.5■■□□□ 1.03
ATG4B-214ENST00000465399 NHSL1Q5SYE7 1610 aa21.5■■□□□ 1.03
ATG4B-214ENST00000465399 BRINP3Q76B58 766 aa21.49■■□□□ 1.03
ATG4B-214ENST00000465399 MST1RQ04912 1400 aa21.47■■□□□ 1.03
ATG4B-214ENST00000465399 ADGRL3Q9HAR2 1447 aa21.46■■□□□ 1.03
ATG4B-214ENST00000465399 HFM1A2PYH4 1435 aa21.46■■□□□ 1.03
ATG4B-214ENST00000465399 ZNF772Q68DY9 489 aaPredicted RBP21.44■■□□□ 1.02
ATG4B-214ENST00000465399 TRIM52Q96A61 297 aa21.44■■□□□ 1.02
ATG4B-214ENST00000465399 PPLO60437 1756 aa21.43■■□□□ 1.02
ATG4B-214ENST00000465399 SETD5Q9C0A6 1442 aa21.42■■□□□ 1.02
ATG4B-214ENST00000465399 VGFO15240 615 aaPredicted RBP21.41■■□□□ 1.02
ATG4B-214ENST00000465399 PTCH1Q13635 1447 aa21.4■■□□□ 1.02
ATG4B-214ENST00000465399 SLC4A1APQ9BWU0 796 aaKnown RBP21.39■■□□□ 1.01
ATG4B-214ENST00000465399 NUTM2BA6NNL0 878 aaPredicted RBP21.38■■□□□ 1.01
ATG4B-214ENST00000465399 NUTM2EB1AL46 878 aaPredicted RBP21.38■■□□□ 1.01
ATG4B-214ENST00000465399 NUTM2AQ8IVF1 878 aaPredicted RBP21.38■■□□□ 1.01
ATG4B-214ENST00000465399 RPGRIP1LQ68CZ1 1315 aa21.37■■□□□ 1.01
ATG4B-214ENST00000465399 LRRC59Q96AG4 307 aaKnown RBP21.37■■□□□ 1.01
ATG4B-214ENST00000465399 LAMC1P11047 1609 aa21.35■■□□□ 1.01
ATG4B-214ENST00000465399 C1orf167Q5SNV9 1468 aa21.34■■□□□ 1.01
ATG4B-214ENST00000465399 PRAG1Q86YV5 1406 aa21.34■■□□□ 1.01
ATG4B-214ENST00000465399 ROBO2Q9HCK4 1378 aa21.33■■□□□ 1
ATG4B-214ENST00000465399 DDX17Q92841 729 aaKnown RBP21.32■■□□□ 1
ATG4B-214ENST00000465399 PNPLA6Q8IY17 1366 aa21.32■■□□□ 1
ATG4B-214ENST00000465399 RXRBP28702 533 aa21.31■■□□□ 1
ATG4B-214ENST00000465399 AFF2P51816 1311 aa21.3■■□□□ 1
ATG4B-214ENST00000465399 IFT172Q9UG01 1749 aa21.3■■□□□ 1
ATG4B-214ENST00000465399 CDK12Q9NYV4 1490 aaPredicted RBP21.29■■□□□ 1
ATG4B-214ENST00000465399 CCDC144AA2RUR9 1427 aa21.29■■□□□ 1
ATG4B-214ENST00000465399 C8orf37Q96NL8 207 aa21.27■■□□□ 1
ATG4B-214ENST00000465399 CDC42BPGQ6DT37 1551 aa21.27■□□□□ 0.99
ATG4B-214ENST00000465399 FOXD1Q16676 465 aa21.26■□□□□ 0.99
ATG4B-214ENST00000465399 ORAI2Q96SN7 254 aa21.24■□□□□ 0.99
ATG4B-214ENST00000465399 KNDC1Q76NI1 1749 aa21.24■□□□□ 0.99
ATG4B-214ENST00000465399 UPF1Q92900 1129 aaKnown RBP eCLIP21.23■□□□□ 0.99
ATG4B-214ENST00000465399 SOS2Q07890 1332 aaPredicted RBP21.23■□□□□ 0.99
ATG4B-214ENST00000465399 COL22A1Q8NFW1 1626 aaPredicted RBP21.22■□□□□ 0.99
ATG4B-214ENST00000465399 ANKRD30BQ9BXX2 1392 aa21.22■□□□□ 0.99
ATG4B-214ENST00000465399 SPATA31E1Q6ZUB1 1445 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms