RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 RIMS2Q9UQ26 1411 aa17.42■□□□□ 0.38
APTX-213ENST00000465003 SCAF11Q99590 1463 aaKnown RBP17.41■□□□□ 0.38
APTX-213ENST00000465003 ZFYVE9O95405 1425 aa17.4■□□□□ 0.38
APTX-213ENST00000465003 SIN3AQ96ST3 1273 aa17.4■□□□□ 0.38
APTX-213ENST00000465003 PPP1R15AO75807 674 aaPredicted RBP17.39■□□□□ 0.37
APTX-213ENST00000465003 EID1Q9Y6B2 187 aa17.39■□□□□ 0.37
APTX-213ENST00000465003 IQGAP1P46940 1657 aa17.38■□□□□ 0.37
APTX-213ENST00000465003 NPHP4O75161 1426 aaPredicted RBP17.37■□□□□ 0.37
APTX-213ENST00000465003 SPATA31E1Q6ZUB1 1445 aa17.37■□□□□ 0.37
APTX-213ENST00000465003 NEXMIFQ5QGS0 1516 aa17.37■□□□□ 0.37
APTX-213ENST00000465003 BCANQ96GW7 911 aa17.37■□□□□ 0.37
APTX-213ENST00000465003 NEUROD1Q13562 356 aa17.37■□□□□ 0.37
APTX-213ENST00000465003 SLC26A8Q96RN1 970 aa17.36■□□□□ 0.37
APTX-213ENST00000465003 PPLO60437 1756 aa17.33■□□□□ 0.37
APTX-213ENST00000465003 MED14O60244 1454 aa17.33■□□□□ 0.37
APTX-213ENST00000465003 ZNF335Q9H4Z2 1342 aaPredicted RBP17.33■□□□□ 0.36
APTX-213ENST00000465003 KDM2AQ9Y2K7 1162 aa17.31■□□□□ 0.36
APTX-213ENST00000465003 ADGRF5Q8IZF2 1346 aa17.31■□□□□ 0.36
APTX-213ENST00000465003 IFT172Q9UG01 1749 aa17.31■□□□□ 0.36
APTX-213ENST00000465003 DMRT2Q9Y5R5 561 aa17.3■□□□□ 0.36
APTX-213ENST00000465003 NRXN3Q9Y4C0 1643 aa17.29■□□□□ 0.36
APTX-213ENST00000465003 PLEKHG1Q9ULL1 1385 aa17.29■□□□□ 0.36
APTX-213ENST00000465003 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.28■□□□□ 0.36
APTX-213ENST00000465003 DCAF11Q8TEB1 546 aa17.28■□□□□ 0.36
APTX-213ENST00000465003 ADAMTS13Q76LX8 1427 aa17.27■□□□□ 0.36
APTX-213ENST00000465003 HDGFP51858 240 aaKnown RBP17.27■□□□□ 0.36
APTX-213ENST00000465003 STRCP1A6NGW2 1772 aa17.26■□□□□ 0.35
APTX-213ENST00000465003 CCER1Q8TC90 406 aaPredicted RBP17.26■□□□□ 0.35
APTX-213ENST00000465003 VGFO15240 615 aaPredicted RBP17.24■□□□□ 0.35
APTX-213ENST00000465003 RPGRIP1LQ68CZ1 1315 aa17.24■□□□□ 0.35
APTX-213ENST00000465003 RBM33Q96EV2 1170 aaKnown RBP17.24■□□□□ 0.35
APTX-213ENST00000465003 SETBP1Q9Y6X0 1596 aa17.23■□□□□ 0.35
APTX-213ENST00000465003 L3MBTL2Q969R5 705 aa17.22■□□□□ 0.35
APTX-213ENST00000465003 METP08581 1390 aa17.22■□□□□ 0.35
APTX-213ENST00000465003 LTBP4Q8N2S1 1624 aa17.21■□□□□ 0.35
APTX-213ENST00000465003 SETD1AO15047 1707 aaKnown RBP17.2■□□□□ 0.34
APTX-213ENST00000465003 ALKQ9UM73 1620 aa17.2■□□□□ 0.34
APTX-213ENST00000465003 PIK3C2GO75747 1445 aa17.2■□□□□ 0.34
APTX-213ENST00000465003 MYOM2P54296 1465 aa17.19■□□□□ 0.34
APTX-213ENST00000465003 PTPRUQ92729 1446 aa17.19■□□□□ 0.34
APTX-213ENST00000465003 CFAP70Q5T0N1 1121 aa17.19■□□□□ 0.34
APTX-213ENST00000465003 TMEM132EQ6IEE7 984 aa17.19■□□□□ 0.34
APTX-213ENST00000465003 TBX22Q9Y458 520 aa17.17■□□□□ 0.34
APTX-213ENST00000465003 KCNA6P17658 529 aa17.17■□□□□ 0.34
APTX-213ENST00000465003 CHD2O14647 1828 aaKnown RBP17.17■□□□□ 0.34
APTX-213ENST00000465003 NRXN1Q9ULB1 1477 aa17.17■□□□□ 0.34
APTX-213ENST00000465003 ASXL1Q8IXJ9 1541 aa17.16■□□□□ 0.34
APTX-213ENST00000465003 TONSLQ96HA7 1378 aa17.16■□□□□ 0.34
APTX-213ENST00000465003 DIP2AQ14689 1571 aa17.16■□□□□ 0.34
APTX-213ENST00000465003 STK26Q9P289 416 aa17.15■□□□□ 0.34
APTX-213ENST00000465003 AMOTL2Q9Y2J4 779 aa17.14■□□□□ 0.33
APTX-213ENST00000465003 NWD1Q149M9 1564 aa17.13■□□□□ 0.33
APTX-213ENST00000465003 PRAG1Q86YV5 1406 aa17.12■□□□□ 0.33
APTX-213ENST00000465003 LRRC7Q96NW7 1537 aa17.12■□□□□ 0.33
APTX-213ENST00000465003 CERKQ8TCT0 537 aa17.11■□□□□ 0.33
APTX-213ENST00000465003 C14orf93Q9H972 538 aaKnown RBP17.11■□□□□ 0.33
APTX-213ENST00000465003 XIRP1Q702N8 1843 aaKnown RBP17.11■□□□□ 0.33
APTX-213ENST00000465003 XRN1Q8IZH2 1706 aaKnown RBP17.11■□□□□ 0.33
APTX-213ENST00000465003 NBPF8Q3BBV2 869 aa17.1■□□□□ 0.33
APTX-213ENST00000465003 PROSER2Q86WR7 435 aaPredicted RBP17.1■□□□□ 0.33
APTX-213ENST00000465003 NBPF1Q3BBV0 1214 aa17.09■□□□□ 0.33
APTX-213ENST00000465003 CPS1P31327 1500 aa17.09■□□□□ 0.33
APTX-213ENST00000465003 TMEM94Q12767 1356 aa17.09■□□□□ 0.33
APTX-213ENST00000465003 LAMC1P11047 1609 aa17.08■□□□□ 0.32
APTX-213ENST00000465003 ROBO2Q9HCK4 1378 aa17.08■□□□□ 0.32
APTX-213ENST00000465003 ADGRB1O14514 1584 aa17.07■□□□□ 0.32
APTX-213ENST00000465003 PIK3R4Q99570 1358 aa17.07■□□□□ 0.32
APTX-213ENST00000465003 NKTRP30414 1462 aaKnown RBP17.06■□□□□ 0.32
APTX-213ENST00000465003 YTHDC2Q9H6S0 1430 aaKnown RBP17.06■□□□□ 0.32
APTX-213ENST00000465003 CLSPNQ9HAW4 1339 aa17.06■□□□□ 0.32
APTX-213ENST00000465003 SAFB2Q14151 953 aaKnown RBP eCLIP17.06■□□□□ 0.32
APTX-213ENST00000465003 WAPLQ7Z5K2 1190 aa17.06■□□□□ 0.32
APTX-213ENST00000465003 TRAK1Q9UPV9 953 aa17.06■□□□□ 0.32
APTX-213ENST00000465003 C14orf37Q86TY3 774 aa17.05■□□□□ 0.32
APTX-213ENST00000465003 PLEKHH1Q9ULM0 1364 aa17.05■□□□□ 0.32
APTX-213ENST00000465003 TRPM1Q7Z4N2 1603 aa17.04■□□□□ 0.32
APTX-213ENST00000465003 LRPPRCP42704 1394 aaKnown RBP17.02■□□□□ 0.32
APTX-213ENST00000465003 STAC3Q96MF2 364 aa17.02■□□□□ 0.31
APTX-213ENST00000465003 NALCNQ8IZF0 1738 aa17.01■□□□□ 0.31
APTX-213ENST00000465003 ROCK2O75116 1388 aaKnown RBP17.01■□□□□ 0.31
APTX-213ENST00000465003 KNDC1Q76NI1 1749 aa17■□□□□ 0.31
APTX-213ENST00000465003 KIAA1210Q9ULL0 1709 aa17■□□□□ 0.31
APTX-213ENST00000465003 PTCH1Q13635 1447 aa17■□□□□ 0.31
APTX-213ENST00000465003 PRAM1Q96QH2 718 aa17■□□□□ 0.31
APTX-213ENST00000465003 UBAP1LF5GYI3 381 aa16.99■□□□□ 0.31
APTX-213ENST00000465003 SCAF1Q9H7N4 1312 aaKnown RBP16.98■□□□□ 0.31
APTX-213ENST00000465003 ABCC11Q96J66 1382 aa16.98■□□□□ 0.31
APTX-213ENST00000465003 PIP4K2BP78356 416 aa16.98■□□□□ 0.31
APTX-213ENST00000465003 ARHGEF28Q8N1W1 1705 aaKnown RBP16.98■□□□□ 0.31
APTX-213ENST00000465003 TECPR2O15040 1411 aa16.98■□□□□ 0.31
APTX-213ENST00000465003 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.97■□□□□ 0.31
APTX-213ENST00000465003 HIRIP3Q9BW71 556 aaPredicted RBP16.97■□□□□ 0.31
APTX-213ENST00000465003 NUTM2FA1L443 756 aa16.96■□□□□ 0.31
APTX-213ENST00000465003 MSH6P52701 1360 aa16.96■□□□□ 0.31
APTX-213ENST00000465003 POGKQ9P215 609 aa16.95■□□□□ 0.3
APTX-213ENST00000465003 RALGAPBQ86X10 1494 aa16.94■□□□□ 0.3
APTX-213ENST00000465003 CARD11Q9BXL7 1154 aa16.94■□□□□ 0.3
APTX-213ENST00000465003 ADGRL3Q9HAR2 1447 aa16.94■□□□□ 0.3
APTX-213ENST00000465003 MINK1Q8N4C8 1332 aaPredicted RBP16.93■□□□□ 0.3
APTX-213ENST00000465003 IQSEC2Q5JU85 1478 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms