RNA–Protein interactions for RNA: ENST00000464748.1

CDK11A-211, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-211ENST00000464748 CCDC144AA2RUR9 1427 aa29.56■■■□□ 2.32
CDK11A-211ENST00000464748 RIMS2Q9UQ26 1411 aa29.56■■■□□ 2.32
CDK11A-211ENST00000464748 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.55■■■□□ 2.32
CDK11A-211ENST00000464748 PPP1R15AO75807 674 aaPredicted RBP29.48■■■□□ 2.31
CDK11A-211ENST00000464748 ZNF326Q5BKZ1 582 aaKnown RBP29.47■■■□□ 2.31
CDK11A-211ENST00000464748 PLEKHG1Q9ULL1 1385 aa29.47■■■□□ 2.31
CDK11A-211ENST00000464748 ANKRD30BQ9BXX2 1392 aa29.45■■■□□ 2.31
CDK11A-211ENST00000464748 RPGRIP1LQ68CZ1 1315 aa29.44■■■□□ 2.3
CDK11A-211ENST00000464748 NEXMIFQ5QGS0 1516 aa29.43■■■□□ 2.3
CDK11A-211ENST00000464748 LTBP4Q8N2S1 1624 aa29.42■■■□□ 2.3
CDK11A-211ENST00000464748 SPATA31E1Q6ZUB1 1445 aa29.4■■■□□ 2.3
CDK11A-211ENST00000464748 ZNF335Q9H4Z2 1342 aaPredicted RBP29.4■■■□□ 2.3
CDK11A-211ENST00000464748 DIP2AQ14689 1571 aa29.38■■■□□ 2.29
CDK11A-211ENST00000464748 BCANQ96GW7 911 aa29.37■■■□□ 2.29
CDK11A-211ENST00000464748 PPLO60437 1756 aa29.36■■■□□ 2.29
CDK11A-211ENST00000464748 CPS1P31327 1500 aa29.36■■■□□ 2.29
CDK11A-211ENST00000464748 SETBP1Q9Y6X0 1596 aa29.35■■■□□ 2.29
CDK11A-211ENST00000464748 VGFO15240 615 aaPredicted RBP29.34■■■□□ 2.29
CDK11A-211ENST00000464748 NUTM2DQ5VT03 806 aaPredicted RBP29.34■■■□□ 2.29
CDK11A-211ENST00000464748 CERKQ8TCT0 537 aa29.33■■■□□ 2.29
CDK11A-211ENST00000464748 IQSEC2Q5JU85 1478 aa29.32■■■□□ 2.28
CDK11A-211ENST00000464748 SLC26A8Q96RN1 970 aa29.31■■■□□ 2.28
CDK11A-211ENST00000464748 TBX22Q9Y458 520 aa29.31■■■□□ 2.28
CDK11A-211ENST00000464748 ADAMTS13Q76LX8 1427 aa29.3■■■□□ 2.28
CDK11A-211ENST00000464748 IFT172Q9UG01 1749 aa29.3■■■□□ 2.28
CDK11A-211ENST00000464748 RGL3Q3MIN7 710 aa29.28■■■□□ 2.28
CDK11A-211ENST00000464748 PIK3R4Q99570 1358 aa29.27■■■□□ 2.28
CDK11A-211ENST00000464748 NRXN3Q9Y4C0 1643 aa29.27■■■□□ 2.28
CDK11A-211ENST00000464748 STRCP1A6NGW2 1772 aa29.26■■■□□ 2.28
CDK11A-211ENST00000464748 NWD1Q149M9 1564 aa29.25■■■□□ 2.27
CDK11A-211ENST00000464748 DHX57Q6P158 1386 aaKnown RBP29.25■■■□□ 2.27
CDK11A-211ENST00000464748 KCNA6P17658 529 aa29.24■■■□□ 2.27
CDK11A-211ENST00000464748 CHD2O14647 1828 aaKnown RBP29.22■■■□□ 2.27
CDK11A-211ENST00000464748 NKTRP30414 1462 aaKnown RBP29.21■■■□□ 2.27
CDK11A-211ENST00000464748 SENP3Q9H4L4 574 aaPredicted RBP29.2■■■□□ 2.26
CDK11A-211ENST00000464748 MYOM2P54296 1465 aa29.2■■■□□ 2.26
CDK11A-211ENST00000464748 STAC3Q96MF2 364 aa29.19■■■□□ 2.26
CDK11A-211ENST00000464748 PCGF6Q9BYE7 350 aa29.19■■■□□ 2.26
CDK11A-211ENST00000464748 LRRC7Q96NW7 1537 aa29.17■■■□□ 2.26
CDK11A-211ENST00000464748 ALKQ9UM73 1620 aa29.16■■■□□ 2.26
CDK11A-211ENST00000464748 ADGRF5Q8IZF2 1346 aa29.15■■■□□ 2.26
CDK11A-211ENST00000464748 SETD1AO15047 1707 aaKnown RBP29.14■■■□□ 2.26
CDK11A-211ENST00000464748 PIK3C2GO75747 1445 aa29.14■■■□□ 2.26
CDK11A-211ENST00000464748 NRXN1Q9ULB1 1477 aa29.14■■■□□ 2.26
CDK11A-211ENST00000464748 FBXO41Q8TF61 875 aa29.11■■■□□ 2.25
CDK11A-211ENST00000464748 METP08581 1390 aa29.1■■■□□ 2.25
CDK11A-211ENST00000464748 LAMC1P11047 1609 aa29.09■■■□□ 2.25
CDK11A-211ENST00000464748 XRN1Q8IZH2 1706 aaKnown RBP29.09■■■□□ 2.25
CDK11A-211ENST00000464748 PTPRUQ92729 1446 aa29.08■■■□□ 2.25
CDK11A-211ENST00000464748 PROSER2Q86WR7 435 aaPredicted RBP29.07■■■□□ 2.24
CDK11A-211ENST00000464748 AMOTL2Q9Y2J4 779 aa29.07■■■□□ 2.24
CDK11A-211ENST00000464748 DCAF11Q8TEB1 546 aa29.06■■■□□ 2.24
CDK11A-211ENST00000464748 XIRP1Q702N8 1843 aaKnown RBP29.06■■■□□ 2.24
CDK11A-211ENST00000464748 NCOA3Q9Y6Q9 1424 aa29.05■■■□□ 2.24
CDK11A-211ENST00000464748 TMEM94Q12767 1356 aa29.04■■■□□ 2.24
CDK11A-211ENST00000464748 PRAG1Q86YV5 1406 aa29.03■■■□□ 2.24
CDK11A-211ENST00000464748 C14orf93Q9H972 538 aaKnown RBP29.01■■■□□ 2.23
CDK11A-211ENST00000464748 SIN3AQ96ST3 1273 aa29■■■□□ 2.23
CDK11A-211ENST00000464748 KDM2AQ9Y2K7 1162 aa28.99■■■□□ 2.23
CDK11A-211ENST00000464748 PTCH1Q13635 1447 aa28.99■■■□□ 2.23
CDK11A-211ENST00000464748 TOM1O60784 492 aa28.98■■■□□ 2.23
CDK11A-211ENST00000464748 UBAP1LF5GYI3 381 aa28.96■■■□□ 2.23
CDK11A-211ENST00000464748 NEUROD1Q13562 356 aa28.96■■■□□ 2.23
CDK11A-211ENST00000464748 ASXL1Q8IXJ9 1541 aa28.95■■■□□ 2.23
CDK11A-211ENST00000464748 MSH6P52701 1360 aa28.95■■■□□ 2.22
CDK11A-211ENST00000464748 LRPPRCP42704 1394 aaKnown RBP28.94■■■□□ 2.22
CDK11A-211ENST00000464748 KNDC1Q76NI1 1749 aa28.94■■■□□ 2.22
CDK11A-211ENST00000464748 TECPR2O15040 1411 aa28.94■■■□□ 2.22
CDK11A-211ENST00000464748 CFAP70Q5T0N1 1121 aa28.93■■■□□ 2.22
CDK11A-211ENST00000464748 CLSPNQ9HAW4 1339 aa28.93■■■□□ 2.22
CDK11A-211ENST00000464748 ILDR1Q86SU0 546 aaPredicted RBP28.92■■■□□ 2.22
CDK11A-211ENST00000464748 ABCC11Q96J66 1382 aa28.91■■■□□ 2.22
CDK11A-211ENST00000464748 L3MBTL2Q969R5 705 aa28.91■■■□□ 2.22
CDK11A-211ENST00000464748 KIAA1210Q9ULL0 1709 aa28.91■■■□□ 2.22
CDK11A-211ENST00000464748 YTHDC2Q9H6S0 1430 aaKnown RBP28.9■■■□□ 2.22
CDK11A-211ENST00000464748 C14orf37Q86TY3 774 aa28.89■■■□□ 2.22
CDK11A-211ENST00000464748 RBM33Q96EV2 1170 aaKnown RBP28.89■■■□□ 2.22
CDK11A-211ENST00000464748 TMEM132EQ6IEE7 984 aa28.88■■■□□ 2.21
CDK11A-211ENST00000464748 ROBO2Q9HCK4 1378 aa28.88■■■□□ 2.21
CDK11A-211ENST00000464748 C19orf44Q9H6X5 657 aa28.87■■■□□ 2.21
CDK11A-211ENST00000464748 ADGRB1O14514 1584 aa28.87■■■□□ 2.21
CDK11A-211ENST00000464748 DCCP43146 1447 aa28.86■■■□□ 2.21
CDK11A-211ENST00000464748 TONSLQ96HA7 1378 aa28.86■■■□□ 2.21
CDK11A-211ENST00000464748 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.85■■■□□ 2.21
CDK11A-211ENST00000464748 ADGRL3Q9HAR2 1447 aa28.85■■■□□ 2.21
CDK11A-211ENST00000464748 SIRT1Q96EB6 747 aa28.84■■■□□ 2.21
CDK11A-211ENST00000464748 STK26Q9P289 416 aa28.83■■■□□ 2.21
CDK11A-211ENST00000464748 FAM135BQ49AJ0 1406 aa28.83■■■□□ 2.21
CDK11A-211ENST00000464748 CADPS2Q86UW7 1296 aa28.82■■■□□ 2.2
CDK11A-211ENST00000464748 DLC1Q96QB1 1528 aa28.82■■■□□ 2.2
CDK11A-211ENST00000464748 NALCNQ8IZF0 1738 aa28.81■■■□□ 2.2
CDK11A-211ENST00000464748 ATF3P18847 181 aa28.8■■■□□ 2.2
CDK11A-211ENST00000464748 PIP4K2BP78356 416 aa28.77■■■□□ 2.2
CDK11A-211ENST00000464748 SCAF1Q9H7N4 1312 aaKnown RBP28.76■■■□□ 2.19
CDK11A-211ENST00000464748 CCER1Q8TC90 406 aaPredicted RBP28.74■■■□□ 2.19
CDK11A-211ENST00000464748 TRPM1Q7Z4N2 1603 aa28.73■■■□□ 2.19
CDK11A-211ENST00000464748 SLAIN2Q9P270 581 aa28.73■■■□□ 2.19
CDK11A-211ENST00000464748 TIMELESSQ9UNS1 1208 aa28.72■■■□□ 2.19
CDK11A-211ENST00000464748 CDC42BPGQ6DT37 1551 aa28.71■■■□□ 2.19
CDK11A-211ENST00000464748 WAPLQ7Z5K2 1190 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms