RNA–Protein interactions for RNA: ENST00000464729.1

NUP188-202, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 408 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-202ENST00000464729 FECHP22830 423 aa11.53□□□□□ -0.56
NUP188-202ENST00000464729 FAM161AQ3B820 660 aa11.53□□□□□ -0.56
NUP188-202ENST00000464729 HDGFP51858 240 aaKnown RBP11.52□□□□□ -0.57
NUP188-202ENST00000464729 SWT1Q5T5J6 900 aaKnown RBP11.52□□□□□ -0.57
NUP188-202ENST00000464729 DNAJB2P25686 324 aa11.5□□□□□ -0.57
NUP188-202ENST00000464729 PPP4CP60510 307 aa11.5□□□□□ -0.57
NUP188-202ENST00000464729 PXYLP1Q8TE99 480 aa11.49□□□□□ -0.57
NUP188-202ENST00000464729 RCCD1A6NED2 376 aa11.48□□□□□ -0.57
NUP188-202ENST00000464729 OATP04181 439 aa11.48□□□□□ -0.57
NUP188-202ENST00000464729 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.48□□□□□ -0.57
NUP188-202ENST00000464729 TMEM134Q9H6X4 195 aa11.48□□□□□ -0.57
NUP188-202ENST00000464729 IFFO2Q5TF58 517 aa11.47□□□□□ -0.57
NUP188-202ENST00000464729 METTL3Q86U44 580 aaKnown RBP11.47□□□□□ -0.57
NUP188-202ENST00000464729 SLF2Q8IX21 1173 aa11.47□□□□□ -0.57
NUP188-202ENST00000464729 RNF40O75150 1001 aa11.46□□□□□ -0.57
NUP188-202ENST00000464729 ATAD2BQ9ULI0 1458 aa11.45□□□□□ -0.58
NUP188-202ENST00000464729 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.45□□□□□ -0.58
NUP188-202ENST00000464729 ITGBL1O95965 494 aaPredicted RBP11.45□□□□□ -0.58
NUP188-202ENST00000464729 NECTIN2Q92692 538 aa11.44□□□□□ -0.58
NUP188-202ENST00000464729 NESP48681 1621 aa11.44□□□□□ -0.58
NUP188-202ENST00000464729 SLC4A3P48751 1232 aa11.42□□□□□ -0.58
NUP188-202ENST00000464729 LMOD2Q6P5Q4 547 aa11.42□□□□□ -0.58
NUP188-202ENST00000464729 SLC24A1O60721 1099 aa11.41□□□□□ -0.58
NUP188-202ENST00000464729 APLP1P51693 650 aa11.4□□□□□ -0.58
NUP188-202ENST00000464729 MAP2K5Q13163 448 aa11.39□□□□□ -0.59
NUP188-202ENST00000464729 PHOX2BQ99453 314 aa11.37□□□□□ -0.59
NUP188-202ENST00000464729 KCNC4Q03721 635 aa11.36□□□□□ -0.59
NUP188-202ENST00000464729 TJAP1Q5JTD0 557 aa11.36□□□□□ -0.59
NUP188-202ENST00000464729 SMARCA2P51531 1590 aa11.36□□□□□ -0.59
NUP188-202ENST00000464729 HMGXB3Q12766 1538 aa11.35□□□□□ -0.59
NUP188-202ENST00000464729 MINK1Q8N4C8 1332 aaPredicted RBP11.35□□□□□ -0.59
NUP188-202ENST00000464729 A0A0G2JS52 829 aa11.34□□□□□ -0.59
NUP188-202ENST00000464729 IRF6O14896 467 aa11.34□□□□□ -0.59
NUP188-202ENST00000464729 SLC10A3P09131 477 aa11.34□□□□□ -0.59
NUP188-202ENST00000464729 MTRQ99707 1265 aa11.34□□□□□ -0.59
NUP188-202ENST00000464729 PRR14Q9BWN1 585 aa11.34□□□□□ -0.59
NUP188-202ENST00000464729 NLRP7Q8WX94 980 aa11.33□□□□□ -0.6
NUP188-202ENST00000464729 DAXXQ9UER7 740 aaPredicted RBP11.33□□□□□ -0.6
NUP188-202ENST00000464729 CFHP08603 1231 aa11.31□□□□□ -0.6
NUP188-202ENST00000464729 IL21Q9HBE4 155 aa11.31□□□□□ -0.6
NUP188-202ENST00000464729 PDS5BQ9NTI5 1447 aa11.31□□□□□ -0.6
NUP188-202ENST00000464729 ZC3H15Q8WU90 426 aaKnown RBP11.3□□□□□ -0.6
NUP188-202ENST00000464729 CCDC102AQ96A19 550 aa11.3□□□□□ -0.6
NUP188-202ENST00000464729 KMT5BQ4FZB7 885 aa11.29□□□□□ -0.6
NUP188-202ENST00000464729 BAZ1BQ9UIG0 1483 aaKnown RBP11.29□□□□□ -0.6
NUP188-202ENST00000464729 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
NUP188-202ENST00000464729 ACTN4O43707 911 aaKnown RBP11.28□□□□□ -0.6
NUP188-202ENST00000464729 ZMYND10O75800 440 aa11.28□□□□□ -0.6
NUP188-202ENST00000464729 BARGINQ6ZT62 677 aa11.28□□□□□ -0.6
NUP188-202ENST00000464729 PCDHB3Q9Y5E6 796 aa11.28□□□□□ -0.6
NUP188-202ENST00000464729 LAMC3Q9Y6N6 1575 aa11.28□□□□□ -0.6
NUP188-202ENST00000464729 ZNF516Q92618 1163 aa11.27□□□□□ -0.61
NUP188-202ENST00000464729 COPS2P61201 443 aa11.26□□□□□ -0.61
NUP188-202ENST00000464729 RSPH4AQ5TD94 716 aa11.26□□□□□ -0.61
NUP188-202ENST00000464729 SMARCA4P51532 1647 aa11.26□□□□□ -0.61
NUP188-202ENST00000464729 DDX11L8A8MPP1 907 aa11.25□□□□□ -0.61
NUP188-202ENST00000464729 SULF1Q8IWU6 871 aa11.25□□□□□ -0.61
NUP188-202ENST00000464729 BLOC1S3Q6QNY0 202 aa11.24□□□□□ -0.61
NUP188-202ENST00000464729 RDH13Q8NBN7 331 aa11.23□□□□□ -0.61
NUP188-202ENST00000464729 CADPSQ9ULU8 1353 aa11.23□□□□□ -0.61
NUP188-202ENST00000464729 ZPR1O75312 459 aa11.22□□□□□ -0.61
NUP188-202ENST00000464729 RGS20O76081 388 aa11.22□□□□□ -0.61
NUP188-202ENST00000464729 MDM2Q00987 491 aaPredicted RBP11.22□□□□□ -0.61
NUP188-202ENST00000464729 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.61
NUP188-202ENST00000464729 BAZ1AQ9NRL2 1556 aaPredicted RBP11.2□□□□□ -0.62
NUP188-202ENST00000464729 NKX2-3Q8TAU0 364 aa11.2□□□□□ -0.62
NUP188-202ENST00000464729 GCGRP47871 477 aa11.19□□□□□ -0.62
NUP188-202ENST00000464729 TMUB1Q9BVT8 246 aa11.19□□□□□ -0.62
NUP188-202ENST00000464729 CD46P15529 392 aa11.18□□□□□ -0.62
NUP188-202ENST00000464729 BCANQ96GW7 911 aa11.18□□□□□ -0.62
NUP188-202ENST00000464729 PEG3Q9GZU2 1588 aa11.18□□□□□ -0.62
NUP188-202ENST00000464729 CLCN1P35523 988 aa11.17□□□□□ -0.62
NUP188-202ENST00000464729 GPCPD1Q9NPB8 672 aa11.17□□□□□ -0.62
NUP188-202ENST00000464729 MRC2Q9UBG0 1479 aa11.17□□□□□ -0.62
NUP188-202ENST00000464729 NR1I2O75469 434 aa11.16□□□□□ -0.62
NUP188-202ENST00000464729 KIF21AQ7Z4S6 1674 aa11.16□□□□□ -0.62
NUP188-202ENST00000464729 TLL1O43897 1013 aa11.15□□□□□ -0.62
NUP188-202ENST00000464729 FUT2Q10981 343 aa11.15□□□□□ -0.62
NUP188-202ENST00000464729 PUS10Q3MIT2 529 aaKnown RBP11.15□□□□□ -0.62
NUP188-202ENST00000464729 PPP1R18Q6NYC8 613 aa11.15□□□□□ -0.62
NUP188-202ENST00000464729 AMHR2Q16671 573 aa11.14□□□□□ -0.63
NUP188-202ENST00000464729 FAM217BQ9NTX9 383 aaPredicted RBP11.14□□□□□ -0.63
NUP188-202ENST00000464729 ATP6V1AP38606 617 aa11.13□□□□□ -0.63
NUP188-202ENST00000464729 MORN1Q5T089 497 aa11.13□□□□□ -0.63
NUP188-202ENST00000464729 SCUBE3Q8IX30 993 aa11.13□□□□□ -0.63
NUP188-202ENST00000464729 REPIN1Q9BWE0 567 aaKnown RBP11.13□□□□□ -0.63
NUP188-202ENST00000464729 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.12□□□□□ -0.63
NUP188-202ENST00000464729 WDR62O43379 1518 aa11.12□□□□□ -0.63
NUP188-202ENST00000464729 MROH2BQ7Z745 1585 aa11.1□□□□□ -0.63
NUP188-202ENST00000464729 ADH1BP00325 375 aa11.09□□□□□ -0.63
NUP188-202ENST00000464729 GGCXP38435 758 aa11.09□□□□□ -0.63
NUP188-202ENST00000464729 AK7Q96M32 723 aa11.09□□□□□ -0.63
NUP188-202ENST00000464729 TRIM66O15016 1216 aa11.08□□□□□ -0.64
NUP188-202ENST00000464729 TTLL12Q14166 644 aaPredicted RBP11.08□□□□□ -0.64
NUP188-202ENST00000464729 SLC27A5Q9Y2P5 690 aa11.08□□□□□ -0.64
NUP188-202ENST00000464729 KDM4AO75164 1064 aa11.07□□□□□ -0.64
NUP188-202ENST00000464729 THAP11Q96EK4 314 aa11.07□□□□□ -0.64
NUP188-202ENST00000464729 GRIPAP1Q4V328 841 aa11.06□□□□□ -0.64
NUP188-202ENST00000464729 S1PR4O95977 384 aa11.05□□□□□ -0.64
NUP188-202ENST00000464729 SSTR3P32745 418 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms