RNA–Protein interactions for RNA: ENST00000464670.1

LSP1-213, Transcript of lymphocyte specific protein 1, humanhuman

TSL 5

Gene LSP1, Length 244 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-213ENST00000464670 RPRD2Q5VT52 1461 aaKnown RBP20.94■□□□□ 0.94
LSP1-213ENST00000464670 SETD1AO15047 1707 aaKnown RBP20.92■□□□□ 0.94
LSP1-213ENST00000464670 SLAIN2Q9P270 581 aa20.92■□□□□ 0.94
LSP1-213ENST00000464670 MYO5BQ9ULV0 1848 aa20.92■□□□□ 0.94
LSP1-213ENST00000464670 ZFYVE9O95405 1425 aa20.91■□□□□ 0.94
LSP1-213ENST00000464670 COL16A1Q07092 1604 aaPredicted RBP20.91■□□□□ 0.94
LSP1-213ENST00000464670 RBM33Q96EV2 1170 aaKnown RBP20.91■□□□□ 0.94
LSP1-213ENST00000464670 NCOA3Q9Y6Q9 1424 aa20.91■□□□□ 0.94
LSP1-213ENST00000464670 PLEKHG1Q9ULL1 1385 aa20.9■□□□□ 0.94
LSP1-213ENST00000464670 LOC105371045A0A1W2PR82 267 aa20.9■□□□□ 0.94
LSP1-213ENST00000464670 ADGRL2O95490 1459 aa20.89■□□□□ 0.94
LSP1-213ENST00000464670 GCC2Q8IWJ2 1684 aa20.89■□□□□ 0.93
LSP1-213ENST00000464670 TMEM131LA2VDJ0 1609 aa20.86■□□□□ 0.93
LSP1-213ENST00000464670 HDGFP51858 240 aaKnown RBP20.86■□□□□ 0.93
LSP1-213ENST00000464670 BCANQ96GW7 911 aa20.86■□□□□ 0.93
LSP1-213ENST00000464670 SPATA31A6Q5VVP1 1343 aa20.85■□□□□ 0.93
LSP1-213ENST00000464670 CHIC2Q9UKJ5 165 aa20.85■□□□□ 0.93
LSP1-213ENST00000464670 SHPRHQ149N8 1683 aa20.84■□□□□ 0.93
LSP1-213ENST00000464670 APLP2Q06481 763 aa20.84■□□□□ 0.93
LSP1-213ENST00000464670 AHDC1Q5TGY3 1603 aaPredicted RBP20.84■□□□□ 0.93
LSP1-213ENST00000464670 RIMS2Q9UQ26 1411 aa20.84■□□□□ 0.93
LSP1-213ENST00000464670 DIP2AQ14689 1571 aa20.84■□□□□ 0.93
LSP1-213ENST00000464670 TBX22Q9Y458 520 aa20.82■□□□□ 0.92
LSP1-213ENST00000464670 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.81■□□□□ 0.92
LSP1-213ENST00000464670 PPP1R15AO75807 674 aaPredicted RBP20.81■□□□□ 0.92
LSP1-213ENST00000464670 LRP6O75581 1613 aa20.81■□□□□ 0.92
LSP1-213ENST00000464670 ANKRD50Q9ULJ7 1429 aa20.8■□□□□ 0.92
LSP1-213ENST00000464670 PIK3R4Q99570 1358 aa20.8■□□□□ 0.92
LSP1-213ENST00000464670 ZNF772Q68DY9 489 aaPredicted RBP20.79■□□□□ 0.92
LSP1-213ENST00000464670 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.79■□□□□ 0.92
LSP1-213ENST00000464670 CADPS2Q86UW7 1296 aa20.78■□□□□ 0.92
LSP1-213ENST00000464670 ADAMTS13Q76LX8 1427 aa20.77■□□□□ 0.91
LSP1-213ENST00000464670 UNC13BO14795 1591 aa20.76■□□□□ 0.91
LSP1-213ENST00000464670 C19orf44Q9H6X5 657 aa20.76■□□□□ 0.91
LSP1-213ENST00000464670 MEX3CQ5U5Q3 659 aaKnown RBP20.74■□□□□ 0.91
LSP1-213ENST00000464670 UPF1Q92900 1129 aaKnown RBP eCLIP20.74■□□□□ 0.91
LSP1-213ENST00000464670 E9PCH4 1651 aa20.73■□□□□ 0.91
LSP1-213ENST00000464670 C14orf37Q86TY3 774 aa20.73■□□□□ 0.91
LSP1-213ENST00000464670 TRPM2O94759 1503 aa20.73■□□□□ 0.91
LSP1-213ENST00000464670 DCCP43146 1447 aa20.72■□□□□ 0.91
LSP1-213ENST00000464670 SRCAPQ6ZRS2 3230 aa20.72■□□□□ 0.91
LSP1-213ENST00000464670 ATF3P18847 181 aa20.72■□□□□ 0.91
LSP1-213ENST00000464670 CDK12Q9NYV4 1490 aaPredicted RBP20.72■□□□□ 0.91
LSP1-213ENST00000464670 IQGAP3Q86VI3 1631 aa20.69■□□□□ 0.9
LSP1-213ENST00000464670 RXRBP28702 533 aa20.67■□□□□ 0.9
LSP1-213ENST00000464670 BRINP3Q76B58 766 aa20.67■□□□□ 0.9
LSP1-213ENST00000464670 TRIM52Q96A61 297 aa20.67■□□□□ 0.9
LSP1-213ENST00000464670 NHSL1Q5SYE7 1610 aa20.67■□□□□ 0.9
LSP1-213ENST00000464670 CHGAP10645 457 aaKnown RBP20.66■□□□□ 0.9
LSP1-213ENST00000464670 SETD5Q9C0A6 1442 aa20.66■□□□□ 0.9
LSP1-213ENST00000464670 XRN1Q8IZH2 1706 aaKnown RBP20.66■□□□□ 0.9
LSP1-213ENST00000464670 ASXL1Q8IXJ9 1541 aa20.65■□□□□ 0.9
LSP1-213ENST00000464670 PTPRUQ92729 1446 aa20.65■□□□□ 0.9
LSP1-213ENST00000464670 FAM50AQ14320 339 aaKnown RBP20.65■□□□□ 0.9
LSP1-213ENST00000464670 AMOTL2Q9Y2J4 779 aa20.64■□□□□ 0.89
LSP1-213ENST00000464670 NRXN3Q9Y4C0 1643 aa20.63■□□□□ 0.89
LSP1-213ENST00000464670 SETBP1Q9Y6X0 1596 aa20.63■□□□□ 0.89
LSP1-213ENST00000464670 NUTM2DQ5VT03 806 aaPredicted RBP20.62■□□□□ 0.89
LSP1-213ENST00000464670 ROCK1Q13464 1354 aa20.61■□□□□ 0.89
LSP1-213ENST00000464670 MST1RQ04912 1400 aa20.61■□□□□ 0.89
LSP1-213ENST00000464670 AFF2P51816 1311 aa20.58■□□□□ 0.89
LSP1-213ENST00000464670 NUTM2BA6NNL0 878 aaPredicted RBP20.57■□□□□ 0.88
LSP1-213ENST00000464670 NUTM2EB1AL46 878 aaPredicted RBP20.57■□□□□ 0.88
LSP1-213ENST00000464670 NUTM2AQ8IVF1 878 aaPredicted RBP20.57■□□□□ 0.88
LSP1-213ENST00000464670 LRRC59Q96AG4 307 aaKnown RBP20.57■□□□□ 0.88
LSP1-213ENST00000464670 SPHKAPQ2M3C7 1700 aa20.56■□□□□ 0.88
LSP1-213ENST00000464670 NUP155O75694 1391 aa20.54■□□□□ 0.88
LSP1-213ENST00000464670 RGS12O14924 1447 aa20.53■□□□□ 0.88
LSP1-213ENST00000464670 ADGRL3Q9HAR2 1447 aa20.53■□□□□ 0.88
LSP1-213ENST00000464670 LAMC1P11047 1609 aa20.53■□□□□ 0.88
LSP1-213ENST00000464670 NALCNQ8IZF0 1738 aa20.53■□□□□ 0.88
LSP1-213ENST00000464670 EP400Q96L91 3159 aa20.53■□□□□ 0.88
LSP1-213ENST00000464670 PNPLA6Q8IY17 1366 aa20.52■□□□□ 0.88
LSP1-213ENST00000464670 RBM6P78332 1123 aaKnown RBP20.52■□□□□ 0.88
LSP1-213ENST00000464670 METP08581 1390 aa20.5■□□□□ 0.87
LSP1-213ENST00000464670 C8orf37Q96NL8 207 aa20.49■□□□□ 0.87
LSP1-213ENST00000464670 QTRT2Q9H974 415 aaKnown RBP20.49■□□□□ 0.87
LSP1-213ENST00000464670 NEXMIFQ5QGS0 1516 aa20.47■□□□□ 0.87
LSP1-213ENST00000464670 NGLY1Q96IV0 654 aa20.46■□□□□ 0.87
LSP1-213ENST00000464670 C1orf167Q5SNV9 1468 aa20.45■□□□□ 0.86
LSP1-213ENST00000464670 ZNF326Q5BKZ1 582 aaKnown RBP20.45■□□□□ 0.86
LSP1-213ENST00000464670 PTCH1Q13635 1447 aa20.44■□□□□ 0.86
LSP1-213ENST00000464670 KIF1BO60333 1816 aa20.43■□□□□ 0.86
LSP1-213ENST00000464670 DDX17Q92841 729 aaKnown RBP20.43■□□□□ 0.86
LSP1-213ENST00000464670 ATAD2Q6PL18 1390 aa20.43■□□□□ 0.86
LSP1-213ENST00000464670 CLTCL1P53675 1640 aa20.42■□□□□ 0.86
LSP1-213ENST00000464670 SOS2Q07890 1332 aaPredicted RBP20.41■□□□□ 0.86
LSP1-213ENST00000464670 PRAG1Q86YV5 1406 aa20.41■□□□□ 0.86
LSP1-213ENST00000464670 COL22A1Q8NFW1 1626 aaPredicted RBP20.41■□□□□ 0.86
LSP1-213ENST00000464670 TRPC5Q9UL62 973 aaPredicted RBP20.38■□□□□ 0.85
LSP1-213ENST00000464670 ADAMTS2O95450 1211 aa20.37■□□□□ 0.85
LSP1-213ENST00000464670 FOXD1Q16676 465 aa20.37■□□□□ 0.85
LSP1-213ENST00000464670 FNBP4Q8N3X1 1017 aaPredicted RBP20.37■□□□□ 0.85
LSP1-213ENST00000464670 USP21Q9UK80 565 aa20.36■□□□□ 0.85
LSP1-213ENST00000464670 MARF1Q9Y4F3 1742 aaKnown RBP20.35■□□□□ 0.85
LSP1-213ENST00000464670 ATRNO75882 1429 aa20.35■□□□□ 0.85
LSP1-213ENST00000464670 ROBO2Q9HCK4 1378 aa20.34■□□□□ 0.85
LSP1-213ENST00000464670 ORAI2Q96SN7 254 aa20.33■□□□□ 0.85
LSP1-213ENST00000464670 HFM1A2PYH4 1435 aa20.33■□□□□ 0.84
LSP1-213ENST00000464670 VGFO15240 615 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms