RNA–Protein interactions for RNA: ENST00000464626.1

MCF2L2-206, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-206ENST00000464626 MED1Q15648 1581 aaPredicted RBP29.77■■■□□ 2.36
MCF2L2-206ENST00000464626 NWD1Q149M9 1564 aa29.76■■■□□ 2.35
MCF2L2-206ENST00000464626 HDGFP51858 240 aaKnown RBP29.75■■■□□ 2.35
MCF2L2-206ENST00000464626 PLEKHG1Q9ULL1 1385 aa29.75■■■□□ 2.35
MCF2L2-206ENST00000464626 RIMS2Q9UQ26 1411 aa29.74■■■□□ 2.35
MCF2L2-206ENST00000464626 NKTRP30414 1462 aaKnown RBP29.74■■■□□ 2.35
MCF2L2-206ENST00000464626 NUP155O75694 1391 aa29.73■■■□□ 2.35
MCF2L2-206ENST00000464626 TMEM94Q12767 1356 aa29.73■■■□□ 2.35
MCF2L2-206ENST00000464626 ITGAEP38570 1179 aa29.71■■■□□ 2.35
MCF2L2-206ENST00000464626 PPARGC1BQ86YN6 1023 aaKnown RBP29.7■■■□□ 2.35
MCF2L2-206ENST00000464626 PROSER2Q86WR7 435 aaPredicted RBP29.68■■■□□ 2.34
MCF2L2-206ENST00000464626 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.68■■■□□ 2.34
MCF2L2-206ENST00000464626 BCANQ96GW7 911 aa29.67■■■□□ 2.34
MCF2L2-206ENST00000464626 FAM135BQ49AJ0 1406 aa29.67■■■□□ 2.34
MCF2L2-206ENST00000464626 CHD2O14647 1828 aaKnown RBP29.66■■■□□ 2.34
MCF2L2-206ENST00000464626 PPP1R15AO75807 674 aaPredicted RBP29.66■■■□□ 2.34
MCF2L2-206ENST00000464626 RRBP1Q9P2E9 1410 aaKnown RBP29.65■■■□□ 2.34
MCF2L2-206ENST00000464626 TBX22Q9Y458 520 aa29.64■■■□□ 2.34
MCF2L2-206ENST00000464626 CHGAP10645 457 aaKnown RBP29.63■■■□□ 2.33
MCF2L2-206ENST00000464626 DIP2AQ14689 1571 aa29.59■■■□□ 2.33
MCF2L2-206ENST00000464626 ADAMTS13Q76LX8 1427 aa29.58■■■□□ 2.33
MCF2L2-206ENST00000464626 RBM33Q96EV2 1170 aaKnown RBP29.57■■■□□ 2.32
MCF2L2-206ENST00000464626 SENP3Q9H4L4 574 aaPredicted RBP29.57■■■□□ 2.32
MCF2L2-206ENST00000464626 SPHKAPQ2M3C7 1700 aa29.57■■■□□ 2.32
MCF2L2-206ENST00000464626 MSH6P52701 1360 aa29.56■■■□□ 2.32
MCF2L2-206ENST00000464626 PIK3R4Q99570 1358 aa29.56■■■□□ 2.32
MCF2L2-206ENST00000464626 NCOA3Q9Y6Q9 1424 aa29.55■■■□□ 2.32
MCF2L2-206ENST00000464626 ROBO1Q9Y6N7 1651 aa29.54■■■□□ 2.32
MCF2L2-206ENST00000464626 NAIPQ13075 1403 aa29.52■■■□□ 2.32
MCF2L2-206ENST00000464626 NUTM2DQ5VT03 806 aaPredicted RBP29.51■■■□□ 2.31
MCF2L2-206ENST00000464626 PHF23Q9BUL5 403 aaPredicted RBP29.51■■■□□ 2.31
MCF2L2-206ENST00000464626 TRPM2O94759 1503 aa29.48■■■□□ 2.31
MCF2L2-206ENST00000464626 SLAIN2Q9P270 581 aa29.47■■■□□ 2.31
MCF2L2-206ENST00000464626 SETBP1Q9Y6X0 1596 aa29.43■■■□□ 2.3
MCF2L2-206ENST00000464626 NRXN3Q9Y4C0 1643 aa29.42■■■□□ 2.3
MCF2L2-206ENST00000464626 HFM1A2PYH4 1435 aa29.42■■■□□ 2.3
MCF2L2-206ENST00000464626 CLTCL1P53675 1640 aa29.41■■■□□ 2.3
MCF2L2-206ENST00000464626 PTPRUQ92729 1446 aa29.4■■■□□ 2.3
MCF2L2-206ENST00000464626 AMOTL2Q9Y2J4 779 aa29.39■■■□□ 2.3
MCF2L2-206ENST00000464626 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.38■■■□□ 2.29
MCF2L2-206ENST00000464626 C19orf44Q9H6X5 657 aa29.38■■■□□ 2.29
MCF2L2-206ENST00000464626 ZNF326Q5BKZ1 582 aaKnown RBP29.37■■■□□ 2.29
MCF2L2-206ENST00000464626 PHLPP1O60346 1717 aa29.37■■■□□ 2.29
MCF2L2-206ENST00000464626 KIF1BO60333 1816 aa29.36■■■□□ 2.29
MCF2L2-206ENST00000464626 C14orf37Q86TY3 774 aa29.36■■■□□ 2.29
MCF2L2-206ENST00000464626 CADPS2Q86UW7 1296 aa29.36■■■□□ 2.29
MCF2L2-206ENST00000464626 XRN1Q8IZH2 1706 aaKnown RBP29.36■■■□□ 2.29
MCF2L2-206ENST00000464626 NEXMIFQ5QGS0 1516 aa29.35■■■□□ 2.29
MCF2L2-206ENST00000464626 RGS17Q9UGC6 210 aaPredicted RBP29.35■■■□□ 2.29
MCF2L2-206ENST00000464626 ATF3P18847 181 aa29.32■■■□□ 2.28
MCF2L2-206ENST00000464626 DCCP43146 1447 aa29.3■■■□□ 2.28
MCF2L2-206ENST00000464626 JCADQ9P266 1359 aa29.3■■■□□ 2.28
MCF2L2-206ENST00000464626 COL16A1Q07092 1604 aaPredicted RBP29.3■■■□□ 2.28
MCF2L2-206ENST00000464626 METP08581 1390 aa29.29■■■□□ 2.28
MCF2L2-206ENST00000464626 TRIM52Q96A61 297 aa29.29■■■□□ 2.28
MCF2L2-206ENST00000464626 AHDC1Q5TGY3 1603 aaPredicted RBP29.27■■■□□ 2.28
MCF2L2-206ENST00000464626 SLC4A1APQ9BWU0 796 aaKnown RBP29.25■■■□□ 2.27
MCF2L2-206ENST00000464626 RPGRIP1LQ68CZ1 1315 aa29.21■■■□□ 2.27
MCF2L2-206ENST00000464626 VGFO15240 615 aaPredicted RBP29.21■■■□□ 2.27
MCF2L2-206ENST00000464626 BRINP3Q76B58 766 aa29.18■■■□□ 2.26
MCF2L2-206ENST00000464626 ADGRL3Q9HAR2 1447 aa29.18■■■□□ 2.26
MCF2L2-206ENST00000464626 SETD1AO15047 1707 aaKnown RBP29.17■■■□□ 2.26
MCF2L2-206ENST00000464626 MST1RQ04912 1400 aa29.17■■■□□ 2.26
MCF2L2-206ENST00000464626 SPATA31A6Q5VVP1 1343 aa29.17■■■□□ 2.26
MCF2L2-206ENST00000464626 POTEAQ6S8J7 498 aa29.16■■■□□ 2.26
MCF2L2-206ENST00000464626 SHPRHQ149N8 1683 aa29.15■■■□□ 2.26
MCF2L2-206ENST00000464626 PPLO60437 1756 aa29.15■■■□□ 2.26
MCF2L2-206ENST00000464626 ASXL1Q8IXJ9 1541 aa29.14■■■□□ 2.25
MCF2L2-206ENST00000464626 PTCH1Q13635 1447 aa29.13■■■□□ 2.25
MCF2L2-206ENST00000464626 PRAG1Q86YV5 1406 aa29.13■■■□□ 2.25
MCF2L2-206ENST00000464626 NALCNQ8IZF0 1738 aa29.12■■■□□ 2.25
MCF2L2-206ENST00000464626 NHSL1Q5SYE7 1610 aa29.1■■■□□ 2.25
MCF2L2-206ENST00000464626 LRP6O75581 1613 aa29.09■■■□□ 2.25
MCF2L2-206ENST00000464626 FOXD1Q16676 465 aa29.07■■■□□ 2.24
MCF2L2-206ENST00000464626 SETD5Q9C0A6 1442 aa29.07■■■□□ 2.24
MCF2L2-206ENST00000464626 CCDC144AA2RUR9 1427 aa29.06■■■□□ 2.24
MCF2L2-206ENST00000464626 ROBO2Q9HCK4 1378 aa29.05■■■□□ 2.24
MCF2L2-206ENST00000464626 ACIN1Q9UKV3 1341 aaKnown RBP29.05■■■□□ 2.24
MCF2L2-206ENST00000464626 MPHOSPH9Q99550 1183 aa29.05■■■□□ 2.24
MCF2L2-206ENST00000464626 SPATA31E1Q6ZUB1 1445 aa29.03■■■□□ 2.24
MCF2L2-206ENST00000464626 C1orf167Q5SNV9 1468 aa29■■■□□ 2.23
MCF2L2-206ENST00000464626 MEX3CQ5U5Q3 659 aaKnown RBP28.99■■■□□ 2.23
MCF2L2-206ENST00000464626 LRRC59Q96AG4 307 aaKnown RBP28.99■■■□□ 2.23
MCF2L2-206ENST00000464626 IFT172Q9UG01 1749 aa28.99■■■□□ 2.23
MCF2L2-206ENST00000464626 LAMC1P11047 1609 aa28.98■■■□□ 2.23
MCF2L2-206ENST00000464626 ANKRD30BQ9BXX2 1392 aa28.98■■■□□ 2.23
MCF2L2-206ENST00000464626 ZNF772Q68DY9 489 aaPredicted RBP28.97■■■□□ 2.23
MCF2L2-206ENST00000464626 ADGRF5Q8IZF2 1346 aa28.96■■■□□ 2.23
MCF2L2-206ENST00000464626 RGL3Q3MIN7 710 aa28.93■■■□□ 2.22
MCF2L2-206ENST00000464626 TECPR2O15040 1411 aa28.92■■■□□ 2.22
MCF2L2-206ENST00000464626 PNPLA6Q8IY17 1366 aa28.91■■■□□ 2.22
MCF2L2-206ENST00000464626 DDX17Q92841 729 aaKnown RBP28.91■■■□□ 2.22
MCF2L2-206ENST00000464626 CDC42BPGQ6DT37 1551 aa28.89■■■□□ 2.22
MCF2L2-206ENST00000464626 PIK3C2GO75747 1445 aa28.89■■■□□ 2.22
MCF2L2-206ENST00000464626 NUTM2BA6NNL0 878 aaPredicted RBP28.89■■■□□ 2.22
MCF2L2-206ENST00000464626 NUTM2EB1AL46 878 aaPredicted RBP28.89■■■□□ 2.22
MCF2L2-206ENST00000464626 NUTM2AQ8IVF1 878 aaPredicted RBP28.89■■■□□ 2.22
MCF2L2-206ENST00000464626 ORAI2Q96SN7 254 aa28.88■■■□□ 2.21
MCF2L2-206ENST00000464626 SOS2Q07890 1332 aaPredicted RBP28.88■■■□□ 2.21
MCF2L2-206ENST00000464626 LRPPRCP42704 1394 aaKnown RBP28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms