RNA–Protein interactions for RNA: ENST00000464526.1

LST1-220, leukocyte specific transcript 1, humanhuman

TSL 1 (best)

Gene LST1, Length 1,832 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-220ENST00000464526 NEURL4Q96JN8 1562 aa25.56■■□□□ 1.68
LST1-220ENST00000464526 ZNF326Q5BKZ1 582 aaKnown RBP25.56■■□□□ 1.68
LST1-220ENST00000464526 RIMS2Q9UQ26 1411 aa25.55■■□□□ 1.68
LST1-220ENST00000464526 PPLO60437 1756 aa25.55■■□□□ 1.68
LST1-220ENST00000464526 THEMISQ8N1K5 641 aaPredicted RBP25.53■■□□□ 1.68
LST1-220ENST00000464526 NCKAP5LQ9HCH0 1330 aa25.53■■□□□ 1.68
LST1-220ENST00000464526 POLR1AO95602 1720 aaPredicted RBP25.52■■□□□ 1.68
LST1-220ENST00000464526 SCAF11Q99590 1463 aaKnown RBP25.49■■□□□ 1.67
LST1-220ENST00000464526 L3MBTL2Q969R5 705 aa25.47■■□□□ 1.67
LST1-220ENST00000464526 ADGRF5Q8IZF2 1346 aa25.47■■□□□ 1.67
LST1-220ENST00000464526 CLSPNQ9HAW4 1339 aa25.47■■□□□ 1.67
LST1-220ENST00000464526 TXNDC2Q86VQ3 553 aa25.47■■□□□ 1.67
LST1-220ENST00000464526 NRXN3Q9Y4C0 1643 aa25.46■■□□□ 1.67
LST1-220ENST00000464526 IQGAP1P46940 1657 aa25.45■■□□□ 1.66
LST1-220ENST00000464526 DCAF11Q8TEB1 546 aa25.44■■□□□ 1.66
LST1-220ENST00000464526 KDM2AQ9Y2K7 1162 aa25.44■■□□□ 1.66
LST1-220ENST00000464526 MYOM2P54296 1465 aa25.41■■□□□ 1.66
LST1-220ENST00000464526 ANKLE2Q86XL3 938 aa25.4■■□□□ 1.66
LST1-220ENST00000464526 TONSLQ96HA7 1378 aa25.4■■□□□ 1.66
LST1-220ENST00000464526 PPP1R15AO75807 674 aaPredicted RBP25.4■■□□□ 1.66
LST1-220ENST00000464526 MED14O60244 1454 aa25.39■■□□□ 1.65
LST1-220ENST00000464526 NRXN1Q9ULB1 1477 aa25.39■■□□□ 1.65
LST1-220ENST00000464526 NPHP4O75161 1426 aaPredicted RBP25.38■■□□□ 1.65
LST1-220ENST00000464526 RPGRIP1LQ68CZ1 1315 aa25.38■■□□□ 1.65
LST1-220ENST00000464526 EID1Q9Y6B2 187 aa25.37■■□□□ 1.65
LST1-220ENST00000464526 ADAMTS13Q76LX8 1427 aa25.37■■□□□ 1.65
LST1-220ENST00000464526 PLEKHG1Q9ULL1 1385 aa25.37■■□□□ 1.65
LST1-220ENST00000464526 PIK3C2GO75747 1445 aa25.37■■□□□ 1.65
LST1-220ENST00000464526 SETD1AO15047 1707 aaKnown RBP25.36■■□□□ 1.65
LST1-220ENST00000464526 SETBP1Q9Y6X0 1596 aa25.36■■□□□ 1.65
LST1-220ENST00000464526 SLC26A8Q96RN1 970 aa25.35■■□□□ 1.65
LST1-220ENST00000464526 PRAG1Q86YV5 1406 aa25.33■■□□□ 1.65
LST1-220ENST00000464526 ASXL1Q8IXJ9 1541 aa25.33■■□□□ 1.65
LST1-220ENST00000464526 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.33■■□□□ 1.65
LST1-220ENST00000464526 NBPF8Q3BBV2 869 aa25.32■■□□□ 1.64
LST1-220ENST00000464526 VGFO15240 615 aaPredicted RBP25.31■■□□□ 1.64
LST1-220ENST00000464526 ALKQ9UM73 1620 aa25.31■■□□□ 1.64
LST1-220ENST00000464526 BCANQ96GW7 911 aa25.29■■□□□ 1.64
LST1-220ENST00000464526 CFAP70Q5T0N1 1121 aa25.28■■□□□ 1.64
LST1-220ENST00000464526 METP08581 1390 aa25.27■■□□□ 1.64
LST1-220ENST00000464526 STRCP1A6NGW2 1772 aa25.25■■□□□ 1.63
LST1-220ENST00000464526 HDGFP51858 240 aaKnown RBP25.25■■□□□ 1.63
LST1-220ENST00000464526 TRPM1Q7Z4N2 1603 aa25.25■■□□□ 1.63
LST1-220ENST00000464526 PTPRUQ92729 1446 aa25.24■■□□□ 1.63
LST1-220ENST00000464526 TMEM132EQ6IEE7 984 aa25.23■■□□□ 1.63
LST1-220ENST00000464526 ADGRB1O14514 1584 aa25.22■■□□□ 1.63
LST1-220ENST00000464526 NBPF1Q3BBV0 1214 aa25.22■■□□□ 1.63
LST1-220ENST00000464526 DIP2AQ14689 1571 aa25.22■■□□□ 1.63
LST1-220ENST00000464526 ZNF335Q9H4Z2 1342 aaPredicted RBP25.2■■□□□ 1.63
LST1-220ENST00000464526 C14orf93Q9H972 538 aaKnown RBP25.2■■□□□ 1.62
LST1-220ENST00000464526 LAMC1P11047 1609 aa25.2■■□□□ 1.62
LST1-220ENST00000464526 KIAA1210Q9ULL0 1709 aa25.17■■□□□ 1.62
LST1-220ENST00000464526 TBX22Q9Y458 520 aa25.16■■□□□ 1.62
LST1-220ENST00000464526 CHD2O14647 1828 aaKnown RBP25.16■■□□□ 1.62
LST1-220ENST00000464526 XRN1Q8IZH2 1706 aaKnown RBP25.15■■□□□ 1.62
LST1-220ENST00000464526 RALGAPBQ86X10 1494 aa25.15■■□□□ 1.62
LST1-220ENST00000464526 TIMELESSQ9UNS1 1208 aa25.14■■□□□ 1.62
LST1-220ENST00000464526 NWD1Q149M9 1564 aa25.14■■□□□ 1.61
LST1-220ENST00000464526 STAC3Q96MF2 364 aa25.13■■□□□ 1.61
LST1-220ENST00000464526 RBM33Q96EV2 1170 aaKnown RBP25.11■■□□□ 1.61
LST1-220ENST00000464526 STK26Q9P289 416 aa25.11■■□□□ 1.61
LST1-220ENST00000464526 YTHDC2Q9H6S0 1430 aaKnown RBP25.1■■□□□ 1.61
LST1-220ENST00000464526 KCNA6P17658 529 aa25.1■■□□□ 1.61
LST1-220ENST00000464526 DMRT2Q9Y5R5 561 aa25.1■■□□□ 1.61
LST1-220ENST00000464526 ROCK2O75116 1388 aaKnown RBP25.09■■□□□ 1.61
LST1-220ENST00000464526 LTBP4Q8N2S1 1624 aa25.09■■□□□ 1.61
LST1-220ENST00000464526 ROBO2Q9HCK4 1378 aa25.08■■□□□ 1.6
LST1-220ENST00000464526 AMOTL2Q9Y2J4 779 aa25.07■■□□□ 1.6
LST1-220ENST00000464526 KNDC1Q76NI1 1749 aa25.06■■□□□ 1.6
LST1-220ENST00000464526 LRPPRCP42704 1394 aaKnown RBP25.06■■□□□ 1.6
LST1-220ENST00000464526 GPRASP1Q5JY77 1395 aa25.06■■□□□ 1.6
LST1-220ENST00000464526 PIK3R4Q99570 1358 aa25.06■■□□□ 1.6
LST1-220ENST00000464526 PLEKHH1Q9ULM0 1364 aa25.06■■□□□ 1.6
LST1-220ENST00000464526 ARHGEF28Q8N1W1 1705 aaKnown RBP25.05■■□□□ 1.6
LST1-220ENST00000464526 CPS1P31327 1500 aa25.04■■□□□ 1.6
LST1-220ENST00000464526 TRAK1Q9UPV9 953 aa25.04■■□□□ 1.6
LST1-220ENST00000464526 XIRP1Q702N8 1843 aaKnown RBP25.03■■□□□ 1.6
LST1-220ENST00000464526 TECPR2O15040 1411 aa25.02■■□□□ 1.6
LST1-220ENST00000464526 WAPLQ7Z5K2 1190 aa25■■□□□ 1.59
LST1-220ENST00000464526 NKTRP30414 1462 aaKnown RBP25■■□□□ 1.59
LST1-220ENST00000464526 LRRC7Q96NW7 1537 aa25■■□□□ 1.59
LST1-220ENST00000464526 ABCC11Q96J66 1382 aa25■■□□□ 1.59
LST1-220ENST00000464526 CARD11Q9BXL7 1154 aa25■■□□□ 1.59
LST1-220ENST00000464526 PTCH1Q13635 1447 aa24.99■■□□□ 1.59
LST1-220ENST00000464526 SAFB2Q14151 953 aaKnown RBP eCLIP24.98■■□□□ 1.59
LST1-220ENST00000464526 NALCNQ8IZF0 1738 aa24.96■■□□□ 1.59
LST1-220ENST00000464526 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.96■■□□□ 1.59
LST1-220ENST00000464526 DLC1Q96QB1 1528 aa24.96■■□□□ 1.59
LST1-220ENST00000464526 TMEM94Q12767 1356 aa24.95■■□□□ 1.59
LST1-220ENST00000464526 PRAM1Q96QH2 718 aa24.95■■□□□ 1.58
LST1-220ENST00000464526 PROSER2Q86WR7 435 aaPredicted RBP24.92■■□□□ 1.58
LST1-220ENST00000464526 USP47Q96K76 1375 aa24.92■■□□□ 1.58
LST1-220ENST00000464526 QRICH2Q9H0J4 1663 aa24.91■■□□□ 1.58
LST1-220ENST00000464526 FAM135BQ49AJ0 1406 aa24.9■■□□□ 1.58
LST1-220ENST00000464526 HIRIP3Q9BW71 556 aaPredicted RBP24.89■■□□□ 1.57
LST1-220ENST00000464526 MINK1Q8N4C8 1332 aaPredicted RBP24.85■■□□□ 1.57
LST1-220ENST00000464526 ST20-MTHFSA0A0A6YYL1 179 aa24.84■■□□□ 1.57
LST1-220ENST00000464526 POGKQ9P215 609 aa24.84■■□□□ 1.57
LST1-220ENST00000464526 ADGRL3Q9HAR2 1447 aa24.84■■□□□ 1.57
LST1-220ENST00000464526 CENPJQ9HC77 1338 aaPredicted RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms