RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 SLC26A8Q96RN1 970 aa22.32■■□□□ 1.16
ALMS1-202ENST00000464408 ZFYVE9O95405 1425 aa22.3■■□□□ 1.16
ALMS1-202ENST00000464408 SOCS7O14512 581 aa22.27■■□□□ 1.16
ALMS1-202ENST00000464408 RBM33Q96EV2 1170 aaKnown RBP22.27■■□□□ 1.16
ALMS1-202ENST00000464408 TMEM94Q12767 1356 aa22.26■■□□□ 1.15
ALMS1-202ENST00000464408 NWD1Q149M9 1564 aa22.26■■□□□ 1.15
ALMS1-202ENST00000464408 RIMS2Q9UQ26 1411 aa22.26■■□□□ 1.15
ALMS1-202ENST00000464408 KCNA6P17658 529 aa22.25■■□□□ 1.15
ALMS1-202ENST00000464408 NUP155O75694 1391 aa22.25■■□□□ 1.15
ALMS1-202ENST00000464408 BCANQ96GW7 911 aa22.23■■□□□ 1.15
ALMS1-202ENST00000464408 CHGAP10645 457 aaKnown RBP22.22■■□□□ 1.15
ALMS1-202ENST00000464408 PLEKHG1Q9ULL1 1385 aa22.22■■□□□ 1.15
ALMS1-202ENST00000464408 CHD2O14647 1828 aaKnown RBP22.22■■□□□ 1.15
ALMS1-202ENST00000464408 NUTM2DQ5VT03 806 aaPredicted RBP22.21■■□□□ 1.15
ALMS1-202ENST00000464408 PROSER2Q86WR7 435 aaPredicted RBP22.2■■□□□ 1.14
ALMS1-202ENST00000464408 NKTRP30414 1462 aaKnown RBP22.2■■□□□ 1.14
ALMS1-202ENST00000464408 PPP1R15AO75807 674 aaPredicted RBP22.19■■□□□ 1.14
ALMS1-202ENST00000464408 SPHKAPQ2M3C7 1700 aa22.17■■□□□ 1.14
ALMS1-202ENST00000464408 RRBP1Q9P2E9 1410 aaKnown RBP22.16■■□□□ 1.14
ALMS1-202ENST00000464408 ROBO1Q9Y6N7 1651 aa22.16■■□□□ 1.14
ALMS1-202ENST00000464408 ADAMTS13Q76LX8 1427 aa22.14■■□□□ 1.14
ALMS1-202ENST00000464408 FAM135BQ49AJ0 1406 aa22.13■■□□□ 1.13
ALMS1-202ENST00000464408 HDGFP51858 240 aaKnown RBP22.1■■□□□ 1.13
ALMS1-202ENST00000464408 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.1■■□□□ 1.13
ALMS1-202ENST00000464408 TBX22Q9Y458 520 aa22.1■■□□□ 1.13
ALMS1-202ENST00000464408 DIP2AQ14689 1571 aa22.09■■□□□ 1.13
ALMS1-202ENST00000464408 NAIPQ13075 1403 aa22.09■■□□□ 1.13
ALMS1-202ENST00000464408 NRXN3Q9Y4C0 1643 aa22.09■■□□□ 1.13
ALMS1-202ENST00000464408 PHF23Q9BUL5 403 aaPredicted RBP22.08■■□□□ 1.13
ALMS1-202ENST00000464408 CLTCL1P53675 1640 aa22.08■■□□□ 1.13
ALMS1-202ENST00000464408 MSH6P52701 1360 aa22.08■■□□□ 1.12
ALMS1-202ENST00000464408 PTPRUQ92729 1446 aa22.06■■□□□ 1.12
ALMS1-202ENST00000464408 TRPM2O94759 1503 aa22.04■■□□□ 1.12
ALMS1-202ENST00000464408 PHLPP1O60346 1717 aa22.03■■□□□ 1.12
ALMS1-202ENST00000464408 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.03■■□□□ 1.12
ALMS1-202ENST00000464408 SLAIN2Q9P270 581 aa22.02■■□□□ 1.12
ALMS1-202ENST00000464408 SETBP1Q9Y6X0 1596 aa22.01■■□□□ 1.11
ALMS1-202ENST00000464408 PIK3R4Q99570 1358 aa22■■□□□ 1.11
ALMS1-202ENST00000464408 RGS17Q9UGC6 210 aaPredicted RBP22■■□□□ 1.11
ALMS1-202ENST00000464408 NEXMIFQ5QGS0 1516 aa22■■□□□ 1.11
ALMS1-202ENST00000464408 XRN1Q8IZH2 1706 aaKnown RBP22■■□□□ 1.11
ALMS1-202ENST00000464408 KIF1BO60333 1816 aa21.99■■□□□ 1.11
ALMS1-202ENST00000464408 ZNF326Q5BKZ1 582 aaKnown RBP21.99■■□□□ 1.11
ALMS1-202ENST00000464408 HFM1A2PYH4 1435 aa21.98■■□□□ 1.11
ALMS1-202ENST00000464408 C14orf37Q86TY3 774 aa21.98■■□□□ 1.11
ALMS1-202ENST00000464408 AMOTL2Q9Y2J4 779 aa21.98■■□□□ 1.11
ALMS1-202ENST00000464408 NCOA3Q9Y6Q9 1424 aa21.97■■□□□ 1.11
ALMS1-202ENST00000464408 COL16A1Q07092 1604 aaPredicted RBP21.96■■□□□ 1.11
ALMS1-202ENST00000464408 TRIM52Q96A61 297 aa21.95■■□□□ 1.1
ALMS1-202ENST00000464408 METP08581 1390 aa21.95■■□□□ 1.1
ALMS1-202ENST00000464408 C19orf44Q9H6X5 657 aa21.92■■□□□ 1.1
ALMS1-202ENST00000464408 SETD1AO15047 1707 aaKnown RBP21.89■■□□□ 1.1
ALMS1-202ENST00000464408 ATF3P18847 181 aa21.89■■□□□ 1.09
ALMS1-202ENST00000464408 CADPS2Q86UW7 1296 aa21.89■■□□□ 1.09
ALMS1-202ENST00000464408 AHDC1Q5TGY3 1603 aaPredicted RBP21.88■■□□□ 1.09
ALMS1-202ENST00000464408 SLC4A1APQ9BWU0 796 aaKnown RBP21.88■■□□□ 1.09
ALMS1-202ENST00000464408 JCADQ9P266 1359 aa21.87■■□□□ 1.09
ALMS1-202ENST00000464408 NALCNQ8IZF0 1738 aa21.87■■□□□ 1.09
ALMS1-202ENST00000464408 FOXD1Q16676 465 aa21.87■■□□□ 1.09
ALMS1-202ENST00000464408 POTEAQ6S8J7 498 aa21.87■■□□□ 1.09
ALMS1-202ENST00000464408 PPLO60437 1756 aa21.86■■□□□ 1.09
ALMS1-202ENST00000464408 LRP6O75581 1613 aa21.84■■□□□ 1.09
ALMS1-202ENST00000464408 DCCP43146 1447 aa21.84■■□□□ 1.09
ALMS1-202ENST00000464408 BRINP3Q76B58 766 aa21.84■■□□□ 1.09
ALMS1-202ENST00000464408 MST1RQ04912 1400 aa21.83■■□□□ 1.09
ALMS1-202ENST00000464408 SHPRHQ149N8 1683 aa21.82■■□□□ 1.08
ALMS1-202ENST00000464408 ASXL1Q8IXJ9 1541 aa21.82■■□□□ 1.08
ALMS1-202ENST00000464408 ADGRL3Q9HAR2 1447 aa21.81■■□□□ 1.08
ALMS1-202ENST00000464408 NHSL1Q5SYE7 1610 aa21.8■■□□□ 1.08
ALMS1-202ENST00000464408 ROBO2Q9HCK4 1378 aa21.77■■□□□ 1.08
ALMS1-202ENST00000464408 VGFO15240 615 aaPredicted RBP21.77■■□□□ 1.08
ALMS1-202ENST00000464408 PTCH1Q13635 1447 aa21.75■■□□□ 1.07
ALMS1-202ENST00000464408 DDX17Q92841 729 aaKnown RBP21.75■■□□□ 1.07
ALMS1-202ENST00000464408 RPGRIP1LQ68CZ1 1315 aa21.75■■□□□ 1.07
ALMS1-202ENST00000464408 IFT172Q9UG01 1749 aa21.75■■□□□ 1.07
ALMS1-202ENST00000464408 SPATA31A6Q5VVP1 1343 aa21.74■■□□□ 1.07
ALMS1-202ENST00000464408 MPHOSPH9Q99550 1183 aa21.73■■□□□ 1.07
ALMS1-202ENST00000464408 CCDC144AA2RUR9 1427 aa21.72■■□□□ 1.07
ALMS1-202ENST00000464408 ADGRF5Q8IZF2 1346 aa21.72■■□□□ 1.07
ALMS1-202ENST00000464408 SPATA31E1Q6ZUB1 1445 aa21.72■■□□□ 1.07
ALMS1-202ENST00000464408 PRAG1Q86YV5 1406 aa21.71■■□□□ 1.07
ALMS1-202ENST00000464408 MEX3CQ5U5Q3 659 aaKnown RBP21.7■■□□□ 1.06
ALMS1-202ENST00000464408 SETD5Q9C0A6 1442 aa21.7■■□□□ 1.06
ALMS1-202ENST00000464408 C1orf167Q5SNV9 1468 aa21.7■■□□□ 1.06
ALMS1-202ENST00000464408 NUTM2BA6NNL0 878 aaPredicted RBP21.69■■□□□ 1.06
ALMS1-202ENST00000464408 NUTM2EB1AL46 878 aaPredicted RBP21.69■■□□□ 1.06
ALMS1-202ENST00000464408 RGL3Q3MIN7 710 aa21.69■■□□□ 1.06
ALMS1-202ENST00000464408 NUTM2AQ8IVF1 878 aaPredicted RBP21.69■■□□□ 1.06
ALMS1-202ENST00000464408 LAMC1P11047 1609 aa21.66■■□□□ 1.06
ALMS1-202ENST00000464408 ORAI2Q96SN7 254 aa21.65■■□□□ 1.06
ALMS1-202ENST00000464408 PNPLA6Q8IY17 1366 aa21.63■■□□□ 1.05
ALMS1-202ENST00000464408 LRRC59Q96AG4 307 aaKnown RBP21.62■■□□□ 1.05
ALMS1-202ENST00000464408 STK26Q9P289 416 aa21.61■■□□□ 1.05
ALMS1-202ENST00000464408 PIK3C2GO75747 1445 aa21.61■■□□□ 1.05
ALMS1-202ENST00000464408 CDC42BPGQ6DT37 1551 aa21.61■■□□□ 1.05
ALMS1-202ENST00000464408 KNDC1Q76NI1 1749 aa21.6■■□□□ 1.05
ALMS1-202ENST00000464408 ZNF772Q68DY9 489 aaPredicted RBP21.6■■□□□ 1.05
ALMS1-202ENST00000464408 TMEM132EQ6IEE7 984 aa21.6■■□□□ 1.05
ALMS1-202ENST00000464408 ANKRD30BQ9BXX2 1392 aa21.6■■□□□ 1.05
ALMS1-202ENST00000464408 WAPLQ7Z5K2 1190 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms