RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 HNRNPUQ00839 825 aaKnown RBP eCLIP9.8□□□□□ -0.84
CLSTN1-204ENST00000464286 ADGRD1Q6QNK2 874 aa9.8□□□□□ -0.84
CLSTN1-204ENST00000464286 JPH4Q96JJ6 628 aa9.8□□□□□ -0.84
CLSTN1-204ENST00000464286 BCL2L12Q9HB09 334 aa9.8□□□□□ -0.84
CLSTN1-204ENST00000464286 FGD6Q6ZV73 1430 aa9.8□□□□□ -0.84
CLSTN1-204ENST00000464286 CTTNBP2Q8WZ74 1663 aa9.8□□□□□ -0.84
CLSTN1-204ENST00000464286 PTPN23Q9H3S7 1636 aa9.79□□□□□ -0.84
CLSTN1-204ENST00000464286 TK2O00142 265 aa9.79□□□□□ -0.84
CLSTN1-204ENST00000464286 KCNK17Q96T54 332 aa9.79□□□□□ -0.84
CLSTN1-204ENST00000464286 AKNAQ7Z591 1439 aa9.79□□□□□ -0.84
CLSTN1-204ENST00000464286 SIN3AQ96ST3 1273 aa9.78□□□□□ -0.84
CLSTN1-204ENST00000464286 SUPT6HQ7KZ85 1726 aaKnown RBP9.78□□□□□ -0.84
CLSTN1-204ENST00000464286 NCOA2Q15596 1464 aa9.78□□□□□ -0.84
CLSTN1-204ENST00000464286 HECW1Q76N89 1606 aa9.78□□□□□ -0.84
CLSTN1-204ENST00000464286 CNTLNQ9NXG0 1405 aa9.77□□□□□ -0.85
CLSTN1-204ENST00000464286 DPYSL4O14531 572 aa9.77□□□□□ -0.85
CLSTN1-204ENST00000464286 HRO43593 1189 aa9.77□□□□□ -0.85
CLSTN1-204ENST00000464286 POLR1AO95602 1720 aaPredicted RBP9.76□□□□□ -0.85
CLSTN1-204ENST00000464286 ZDHHC16Q969W1 377 aa9.76□□□□□ -0.85
CLSTN1-204ENST00000464286 ADAM33Q9BZ11 813 aa9.76□□□□□ -0.85
CLSTN1-204ENST00000464286 GCC2Q8IWJ2 1684 aa9.76□□□□□ -0.85
CLSTN1-204ENST00000464286 ZBED9Q6R2W3 1325 aa9.76□□□□□ -0.85
CLSTN1-204ENST00000464286 EHBP1L1Q8N3D4 1523 aa9.76□□□□□ -0.85
CLSTN1-204ENST00000464286 EIF4G2P78344 907 aaKnown RBP eCLIP9.75□□□□□ -0.85
CLSTN1-204ENST00000464286 PCDHGA10Q9Y5H3 936 aa9.75□□□□□ -0.85
CLSTN1-204ENST00000464286 PTPREP23469 700 aa9.74□□□□□ -0.85
CLSTN1-204ENST00000464286 ANP32AP39687 249 aaKnown RBP9.74□□□□□ -0.85
CLSTN1-204ENST00000464286 RTL5Q5HYW3 569 aaPredicted RBP9.74□□□□□ -0.85
CLSTN1-204ENST00000464286 MTUS2Q5JR59 1369 aa9.74□□□□□ -0.85
CLSTN1-204ENST00000464286 NOP58Q9Y2X3 529 aaKnown RBP9.73□□□□□ -0.85
CLSTN1-204ENST00000464286 ABCA5Q8WWZ7 1642 aa9.73□□□□□ -0.85
CLSTN1-204ENST00000464286 MYOM3Q5VTT5 1437 aa9.73□□□□□ -0.85
CLSTN1-204ENST00000464286 PHF14O94880 888 aa9.72□□□□□ -0.85
CLSTN1-204ENST00000464286 SLC4A5Q9BY07 1137 aa9.72□□□□□ -0.85
CLSTN1-204ENST00000464286 VPS9D1Q9Y2B5 631 aa9.72□□□□□ -0.85
CLSTN1-204ENST00000464286 E2F4Q16254 413 aa9.71□□□□□ -0.86
CLSTN1-204ENST00000464286 CADPSQ9ULU8 1353 aa9.71□□□□□ -0.86
CLSTN1-204ENST00000464286 ABCA10Q8WWZ4 1543 aa9.71□□□□□ -0.86
CLSTN1-204ENST00000464286 DNMBPQ6XZF7 1577 aa9.71□□□□□ -0.86
CLSTN1-204ENST00000464286 DEKP35659 375 aaKnown RBP9.7□□□□□ -0.86
CLSTN1-204ENST00000464286 NAIPQ13075 1403 aa9.7□□□□□ -0.86
CLSTN1-204ENST00000464286 TYW1BQ6NUM6 668 aa9.69□□□□□ -0.86
CLSTN1-204ENST00000464286 SMG6Q86US8 1419 aaKnown RBP9.69□□□□□ -0.86
CLSTN1-204ENST00000464286 ZBED2Q9BTP6 218 aa9.69□□□□□ -0.86
CLSTN1-204ENST00000464286 WDR70Q9NW82 654 aa9.69□□□□□ -0.86
CLSTN1-204ENST00000464286 SAMD9Q5K651 1589 aa9.68□□□□□ -0.86
CLSTN1-204ENST00000464286 TCOF1Q13428 1488 aaKnown RBP9.68□□□□□ -0.86
CLSTN1-204ENST00000464286 NCOA1Q15788 1441 aa9.68□□□□□ -0.86
CLSTN1-204ENST00000464286 ARID4BQ4LE39 1312 aaPredicted RBP9.68□□□□□ -0.86
CLSTN1-204ENST00000464286 USP35Q9P2H5 1018 aa9.68□□□□□ -0.86
CLSTN1-204ENST00000464286 SNAPC4Q5SXM2 1469 aa9.67□□□□□ -0.86
CLSTN1-204ENST00000464286 FHOD3Q2V2M9 1422 aa9.67□□□□□ -0.86
CLSTN1-204ENST00000464286 MIA2Q96PC5 1412 aa9.67□□□□□ -0.86
CLSTN1-204ENST00000464286 PDIA6Q15084 440 aa9.67□□□□□ -0.86
CLSTN1-204ENST00000464286 FBXW7Q969H0 707 aa9.67□□□□□ -0.86
CLSTN1-204ENST00000464286 KTN1Q86UP2 1357 aaKnown RBP9.66□□□□□ -0.86
CLSTN1-204ENST00000464286 CCDC7Q96M83 1385 aa9.66□□□□□ -0.86
CLSTN1-204ENST00000464286 BHMG1C9JSJ3 638 aaPredicted RBP9.66□□□□□ -0.86
CLSTN1-204ENST00000464286 EPAS1Q99814 870 aa9.66□□□□□ -0.86
CLSTN1-204ENST00000464286 MRS2Q9HD23 443 aa9.66□□□□□ -0.86
CLSTN1-204ENST00000464286 ATP1B4Q9UN42 357 aaPredicted RBP9.66□□□□□ -0.86
CLSTN1-204ENST00000464286 ARIH1Q9Y4X5 557 aaPredicted RBP9.66□□□□□ -0.86
CLSTN1-204ENST00000464286 UGGT2Q9NYU1 1516 aa9.66□□□□□ -0.86
CLSTN1-204ENST00000464286 KDM5BQ9UGL1 1544 aa9.66□□□□□ -0.86
CLSTN1-204ENST00000464286 ROCK2O75116 1388 aaKnown RBP9.65□□□□□ -0.86
CLSTN1-204ENST00000464286 WASHC2AQ641Q2 1341 aa9.65□□□□□ -0.86
CLSTN1-204ENST00000464286 HSPA5P11021 654 aaKnown RBP9.65□□□□□ -0.86
CLSTN1-204ENST00000464286 COL9A1P20849 921 aa9.65□□□□□ -0.86
CLSTN1-204ENST00000464286 DDX12PQ92771 950 aa9.65□□□□□ -0.86
CLSTN1-204ENST00000464286 IPO9Q96P70 1041 aaKnown RBP9.65□□□□□ -0.86
CLSTN1-204ENST00000464286 PRKRIP1Q9H875 184 aaPredicted RBP9.65□□□□□ -0.86
CLSTN1-204ENST00000464286 SPDYE16A6NNV3 312 aaPredicted RBP9.64□□□□□ -0.87
CLSTN1-204ENST00000464286 PPP1R3GB7ZBB8 358 aa9.64□□□□□ -0.87
CLSTN1-204ENST00000464286 STAC3Q96MF2 364 aa9.64□□□□□ -0.87
CLSTN1-204ENST00000464286 ARHGEF11O15085 1522 aa9.64□□□□□ -0.87
CLSTN1-204ENST00000464286 GRIN2BQ13224 1484 aa9.64□□□□□ -0.87
CLSTN1-204ENST00000464286 C6orf132Q5T0Z8 1188 aa9.63□□□□□ -0.87
CLSTN1-204ENST00000464286 ROCK1Q13464 1354 aa9.63□□□□□ -0.87
CLSTN1-204ENST00000464286 CCDC136Q96JN2 1154 aa9.62□□□□□ -0.87
CLSTN1-204ENST00000464286 HIRIP3Q9BW71 556 aaPredicted RBP9.62□□□□□ -0.87
CLSTN1-204ENST00000464286 NUDCQ9Y266 331 aa9.62□□□□□ -0.87
CLSTN1-204ENST00000464286 RNF123Q5XPI4 1314 aa9.61□□□□□ -0.87
CLSTN1-204ENST00000464286 PPM1GO15355 546 aaPredicted RBP9.61□□□□□ -0.87
CLSTN1-204ENST00000464286 KCTD12Q96CX2 325 aaKnown RBP9.61□□□□□ -0.87
CLSTN1-204ENST00000464286 RPRD2Q5VT52 1461 aaKnown RBP9.6□□□□□ -0.87
CLSTN1-204ENST00000464286 FANCD2Q9BXW9 1451 aa9.6□□□□□ -0.87
CLSTN1-204ENST00000464286 TCERG1O14776 1098 aaKnown RBP9.6□□□□□ -0.87
CLSTN1-204ENST00000464286 PROX2Q3B8N5 592 aa9.6□□□□□ -0.87
CLSTN1-204ENST00000464286 RBM33Q96EV2 1170 aaKnown RBP9.6□□□□□ -0.87
CLSTN1-204ENST00000464286 HCSTQ9UBK5 93 aa9.6□□□□□ -0.87
CLSTN1-204ENST00000464286 MS4A1P11836 297 aa9.59□□□□□ -0.87
CLSTN1-204ENST00000464286 DDRGK1Q96HY6 314 aa9.59□□□□□ -0.87
CLSTN1-204ENST00000464286 IRX6P78412 446 aaPredicted RBP9.58□□□□□ -0.88
CLSTN1-204ENST00000464286 EN1Q05925 392 aaPredicted RBP9.58□□□□□ -0.88
CLSTN1-204ENST00000464286 NBR1Q14596 966 aa9.58□□□□□ -0.88
CLSTN1-204ENST00000464286 B4GALNT3Q6L9W6 998 aa9.58□□□□□ -0.88
CLSTN1-204ENST00000464286 FAM9BQ8IZU0 186 aa9.58□□□□□ -0.88
CLSTN1-204ENST00000464286 PTPRKQ15262 1439 aa9.57□□□□□ -0.88
CLSTN1-204ENST00000464286 TOPBP1Q92547 1522 aa9.57□□□□□ -0.88
CLSTN1-204ENST00000464286 PDE3BQ13370 1112 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms