RNA–Protein interactions for RNA: ENST00000464117.1

SHISA4-202, Transcript of shisa family member 4, humanhuman

TSL 2

Gene SHISA4, Length 914 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-202ENST00000464117 KCNA6P17658 529 aa30.29■■■□□ 2.44
SHISA4-202ENST00000464117 SLC26A8Q96RN1 970 aa30.29■■■□□ 2.44
SHISA4-202ENST00000464117 RIMS2Q9UQ26 1411 aa30.29■■■□□ 2.44
SHISA4-202ENST00000464117 PLEKHG1Q9ULL1 1385 aa30.27■■■□□ 2.44
SHISA4-202ENST00000464117 CHGAP10645 457 aaKnown RBP30.25■■■□□ 2.43
SHISA4-202ENST00000464117 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.25■■■□□ 2.43
SHISA4-202ENST00000464117 BCANQ96GW7 911 aa30.25■■■□□ 2.43
SHISA4-202ENST00000464117 PPP1R15AO75807 674 aaPredicted RBP30.24■■■□□ 2.43
SHISA4-202ENST00000464117 XIRP1Q702N8 1843 aaKnown RBP30.23■■■□□ 2.43
SHISA4-202ENST00000464117 NAIPQ13075 1403 aa30.21■■■□□ 2.43
SHISA4-202ENST00000464117 NWD1Q149M9 1564 aa30.2■■■□□ 2.43
SHISA4-202ENST00000464117 NKTRP30414 1462 aaKnown RBP30.2■■■□□ 2.43
SHISA4-202ENST00000464117 TMEM94Q12767 1356 aa30.2■■■□□ 2.43
SHISA4-202ENST00000464117 PROSER2Q86WR7 435 aaPredicted RBP30.17■■■□□ 2.42
SHISA4-202ENST00000464117 TBX22Q9Y458 520 aa30.15■■■□□ 2.42
SHISA4-202ENST00000464117 SPHKAPQ2M3C7 1700 aa30.15■■■□□ 2.42
SHISA4-202ENST00000464117 ILDR2Q71H61 639 aa30.14■■■□□ 2.42
SHISA4-202ENST00000464117 HFM1A2PYH4 1435 aa30.13■■■□□ 2.41
SHISA4-202ENST00000464117 SENP3Q9H4L4 574 aaPredicted RBP30.12■■■□□ 2.41
SHISA4-202ENST00000464117 CHD2O14647 1828 aaKnown RBP30.11■■■□□ 2.41
SHISA4-202ENST00000464117 DIP2AQ14689 1571 aa30.1■■■□□ 2.41
SHISA4-202ENST00000464117 NUTM2DQ5VT03 806 aaPredicted RBP30.09■■■□□ 2.41
SHISA4-202ENST00000464117 ADAMTS13Q76LX8 1427 aa30.09■■■□□ 2.41
SHISA4-202ENST00000464117 FAM135BQ49AJ0 1406 aa30.07■■■□□ 2.4
SHISA4-202ENST00000464117 PIK3R4Q99570 1358 aa30.06■■■□□ 2.4
SHISA4-202ENST00000464117 MED1Q15648 1581 aaPredicted RBP30.06■■■□□ 2.4
SHISA4-202ENST00000464117 RBM33Q96EV2 1170 aaKnown RBP30.05■■■□□ 2.4
SHISA4-202ENST00000464117 MSH6P52701 1360 aa30.04■■■□□ 2.4
SHISA4-202ENST00000464117 TRPM2O94759 1503 aa30.04■■■□□ 2.4
SHISA4-202ENST00000464117 TRIM52Q96A61 297 aa30.02■■■□□ 2.4
SHISA4-202ENST00000464117 NCOA3Q9Y6Q9 1424 aa30.02■■■□□ 2.4
SHISA4-202ENST00000464117 ZNF326Q5BKZ1 582 aaKnown RBP30■■■□□ 2.39
SHISA4-202ENST00000464117 CLTCL1P53675 1640 aa30■■■□□ 2.39
SHISA4-202ENST00000464117 SOCS7O14512 581 aa29.97■■■□□ 2.39
SHISA4-202ENST00000464117 SETBP1Q9Y6X0 1596 aa29.96■■■□□ 2.39
SHISA4-202ENST00000464117 SLC4A1APQ9BWU0 796 aaKnown RBP29.95■■■□□ 2.39
SHISA4-202ENST00000464117 ROBO1Q9Y6N7 1651 aa29.95■■■□□ 2.38
SHISA4-202ENST00000464117 KIF1BO60333 1816 aa29.93■■■□□ 2.38
SHISA4-202ENST00000464117 NRXN3Q9Y4C0 1643 aa29.93■■■□□ 2.38
SHISA4-202ENST00000464117 SLAIN2Q9P270 581 aa29.92■■■□□ 2.38
SHISA4-202ENST00000464117 AMOTL2Q9Y2J4 779 aa29.92■■■□□ 2.38
SHISA4-202ENST00000464117 NEXMIFQ5QGS0 1516 aa29.91■■■□□ 2.38
SHISA4-202ENST00000464117 PTPRUQ92729 1446 aa29.9■■■□□ 2.38
SHISA4-202ENST00000464117 C14orf37Q86TY3 774 aa29.89■■■□□ 2.38
SHISA4-202ENST00000464117 PHF23Q9BUL5 403 aaPredicted RBP29.88■■■□□ 2.37
SHISA4-202ENST00000464117 C19orf44Q9H6X5 657 aa29.87■■■□□ 2.37
SHISA4-202ENST00000464117 CADPS2Q86UW7 1296 aa29.85■■■□□ 2.37
SHISA4-202ENST00000464117 XRN1Q8IZH2 1706 aaKnown RBP29.84■■■□□ 2.37
SHISA4-202ENST00000464117 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.82■■■□□ 2.36
SHISA4-202ENST00000464117 METP08581 1390 aa29.82■■■□□ 2.36
SHISA4-202ENST00000464117 RPGRIP1LQ68CZ1 1315 aa29.82■■■□□ 2.36
SHISA4-202ENST00000464117 ATF3P18847 181 aa29.82■■■□□ 2.36
SHISA4-202ENST00000464117 VGFO15240 615 aaPredicted RBP29.81■■■□□ 2.36
SHISA4-202ENST00000464117 ACIN1Q9UKV3 1341 aaKnown RBP29.78■■■□□ 2.36
SHISA4-202ENST00000464117 DCCP43146 1447 aa29.78■■■□□ 2.36
SHISA4-202ENST00000464117 PHLPP1O60346 1717 aa29.76■■■□□ 2.35
SHISA4-202ENST00000464117 MPHOSPH9Q99550 1183 aa29.75■■■□□ 2.35
SHISA4-202ENST00000464117 FOXD1Q16676 465 aa29.74■■■□□ 2.35
SHISA4-202ENST00000464117 CCDC144AA2RUR9 1427 aa29.72■■■□□ 2.35
SHISA4-202ENST00000464117 JCADQ9P266 1359 aa29.71■■■□□ 2.35
SHISA4-202ENST00000464117 PPLO60437 1756 aa29.7■■■□□ 2.35
SHISA4-202ENST00000464117 SETD5Q9C0A6 1442 aa29.69■■■□□ 2.34
SHISA4-202ENST00000464117 COL16A1Q07092 1604 aaPredicted RBP29.68■■■□□ 2.34
SHISA4-202ENST00000464117 SETD1AO15047 1707 aaKnown RBP29.68■■■□□ 2.34
SHISA4-202ENST00000464117 AHDC1Q5TGY3 1603 aaPredicted RBP29.67■■■□□ 2.34
SHISA4-202ENST00000464117 ADGRL3Q9HAR2 1447 aa29.67■■■□□ 2.34
SHISA4-202ENST00000464117 PTCH1Q13635 1447 aa29.66■■■□□ 2.34
SHISA4-202ENST00000464117 BRINP3Q76B58 766 aa29.65■■■□□ 2.34
SHISA4-202ENST00000464117 SPATA31E1Q6ZUB1 1445 aa29.64■■■□□ 2.34
SHISA4-202ENST00000464117 PRAG1Q86YV5 1406 aa29.64■■■□□ 2.34
SHISA4-202ENST00000464117 RGS17Q9UGC6 210 aaPredicted RBP29.64■■■□□ 2.34
SHISA4-202ENST00000464117 MST1RQ04912 1400 aa29.63■■■□□ 2.33
SHISA4-202ENST00000464117 ANKRD30BQ9BXX2 1392 aa29.6■■■□□ 2.33
SHISA4-202ENST00000464117 NALCNQ8IZF0 1738 aa29.59■■■□□ 2.33
SHISA4-202ENST00000464117 RGL3Q3MIN7 710 aa29.59■■■□□ 2.33
SHISA4-202ENST00000464117 ROBO2Q9HCK4 1378 aa29.59■■■□□ 2.33
SHISA4-202ENST00000464117 ASXL1Q8IXJ9 1541 aa29.59■■■□□ 2.33
SHISA4-202ENST00000464117 SPATA31A6Q5VVP1 1343 aa29.57■■■□□ 2.32
SHISA4-202ENST00000464117 ADGRF5Q8IZF2 1346 aa29.56■■■□□ 2.32
SHISA4-202ENST00000464117 RAB3GAP2Q9H2M9 1393 aa29.55■■■□□ 2.32
SHISA4-202ENST00000464117 IFT172Q9UG01 1749 aa29.54■■■□□ 2.32
SHISA4-202ENST00000464117 SHPRHQ149N8 1683 aa29.53■■■□□ 2.32
SHISA4-202ENST00000464117 NHSL1Q5SYE7 1610 aa29.51■■■□□ 2.31
SHISA4-202ENST00000464117 C1orf167Q5SNV9 1468 aa29.49■■■□□ 2.31
SHISA4-202ENST00000464117 PIK3C2GO75747 1445 aa29.48■■■□□ 2.31
SHISA4-202ENST00000464117 POTEAQ6S8J7 498 aa29.48■■■□□ 2.31
SHISA4-202ENST00000464117 LRP6O75581 1613 aa29.47■■■□□ 2.31
SHISA4-202ENST00000464117 TECPR2O15040 1411 aa29.45■■■□□ 2.31
SHISA4-202ENST00000464117 LRRC59Q96AG4 307 aaKnown RBP29.45■■■□□ 2.31
SHISA4-202ENST00000464117 LRPPRCP42704 1394 aaKnown RBP29.44■■■□□ 2.3
SHISA4-202ENST00000464117 MEX3CQ5U5Q3 659 aaKnown RBP29.43■■■□□ 2.3
SHISA4-202ENST00000464117 ABCC11Q96J66 1382 aa29.42■■■□□ 2.3
SHISA4-202ENST00000464117 HRCP23327 699 aa29.41■■■□□ 2.3
SHISA4-202ENST00000464117 STK26Q9P289 416 aa29.4■■■□□ 2.3
SHISA4-202ENST00000464117 MYOM2P54296 1465 aa29.4■■■□□ 2.3
SHISA4-202ENST00000464117 CDC42BPGQ6DT37 1551 aa29.39■■■□□ 2.3
SHISA4-202ENST00000464117 LAMC1P11047 1609 aa29.39■■■□□ 2.3
SHISA4-202ENST00000464117 NRXN1Q9ULB1 1477 aa29.39■■■□□ 2.3
SHISA4-202ENST00000464117 KNDC1Q76NI1 1749 aa29.39■■■□□ 2.3
SHISA4-202ENST00000464117 TMEM132EQ6IEE7 984 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms