RNA–Protein interactions for RNA: ENST00000463936.1

RTN4R-204, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-204ENST00000463936 TMEM131LA2VDJ0 1609 aa22.23■■□□□ 1.15
RTN4R-204ENST00000463936 E9PCH4 1651 aa22.22■■□□□ 1.15
RTN4R-204ENST00000463936 GCC2Q8IWJ2 1684 aa22.21■■□□□ 1.15
RTN4R-204ENST00000463936 PROSER2Q86WR7 435 aaPredicted RBP22.19■■□□□ 1.14
RTN4R-204ENST00000463936 ROCK1Q13464 1354 aa22.19■■□□□ 1.14
RTN4R-204ENST00000463936 NWD1Q149M9 1564 aa22.19■■□□□ 1.14
RTN4R-204ENST00000463936 RIMS2Q9UQ26 1411 aa22.17■■□□□ 1.14
RTN4R-204ENST00000463936 RGS17Q9UGC6 210 aaPredicted RBP22.17■■□□□ 1.14
RTN4R-204ENST00000463936 FAM135BQ49AJ0 1406 aa22.16■■□□□ 1.14
RTN4R-204ENST00000463936 ITGAEP38570 1179 aa22.16■■□□□ 1.14
RTN4R-204ENST00000463936 NUTM2DQ5VT03 806 aaPredicted RBP22.16■■□□□ 1.14
RTN4R-204ENST00000463936 PLEKHG1Q9ULL1 1385 aa22.15■■□□□ 1.14
RTN4R-204ENST00000463936 IQGAP3Q86VI3 1631 aa22.15■■□□□ 1.14
RTN4R-204ENST00000463936 CHD2O14647 1828 aaKnown RBP22.15■■□□□ 1.14
RTN4R-204ENST00000463936 ROBO1Q9Y6N7 1651 aa22.12■■□□□ 1.13
RTN4R-204ENST00000463936 BCANQ96GW7 911 aa22.12■■□□□ 1.13
RTN4R-204ENST00000463936 ADAMTS13Q76LX8 1427 aa22.12■■□□□ 1.13
RTN4R-204ENST00000463936 NKTRP30414 1462 aaKnown RBP22.11■■□□□ 1.13
RTN4R-204ENST00000463936 NUP155O75694 1391 aa22.11■■□□□ 1.13
RTN4R-204ENST00000463936 CHGAP10645 457 aaKnown RBP22.1■■□□□ 1.13
RTN4R-204ENST00000463936 TBX22Q9Y458 520 aa22.09■■□□□ 1.13
RTN4R-204ENST00000463936 PHF23Q9BUL5 403 aaPredicted RBP22.07■■□□□ 1.12
RTN4R-204ENST00000463936 PPP1R15AO75807 674 aaPredicted RBP22.06■■□□□ 1.12
RTN4R-204ENST00000463936 SLAIN2Q9P270 581 aa22.05■■□□□ 1.12
RTN4R-204ENST00000463936 PTPRUQ92729 1446 aa22.04■■□□□ 1.12
RTN4R-204ENST00000463936 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.02■■□□□ 1.12
RTN4R-204ENST00000463936 MSH6P52701 1360 aa22.01■■□□□ 1.11
RTN4R-204ENST00000463936 HDGFP51858 240 aaKnown RBP22.01■■□□□ 1.11
RTN4R-204ENST00000463936 NRXN3Q9Y4C0 1643 aa22■■□□□ 1.11
RTN4R-204ENST00000463936 POTEAQ6S8J7 498 aa21.99■■□□□ 1.11
RTN4R-204ENST00000463936 RRBP1Q9P2E9 1410 aaKnown RBP21.97■■□□□ 1.11
RTN4R-204ENST00000463936 SPHKAPQ2M3C7 1700 aa21.97■■□□□ 1.11
RTN4R-204ENST00000463936 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.97■■□□□ 1.11
RTN4R-204ENST00000463936 AMOTL2Q9Y2J4 779 aa21.96■■□□□ 1.11
RTN4R-204ENST00000463936 PHLPP1O60346 1717 aa21.96■■□□□ 1.11
RTN4R-204ENST00000463936 DIP2AQ14689 1571 aa21.95■■□□□ 1.11
RTN4R-204ENST00000463936 NAIPQ13075 1403 aa21.95■■□□□ 1.1
RTN4R-204ENST00000463936 PIK3R4Q99570 1358 aa21.94■■□□□ 1.1
RTN4R-204ENST00000463936 NCOA3Q9Y6Q9 1424 aa21.94■■□□□ 1.1
RTN4R-204ENST00000463936 CLTCL1P53675 1640 aa21.94■■□□□ 1.1
RTN4R-204ENST00000463936 COL16A1Q07092 1604 aaPredicted RBP21.94■■□□□ 1.1
RTN4R-204ENST00000463936 METP08581 1390 aa21.92■■□□□ 1.1
RTN4R-204ENST00000463936 SETBP1Q9Y6X0 1596 aa21.91■■□□□ 1.1
RTN4R-204ENST00000463936 TRPM2O94759 1503 aa21.91■■□□□ 1.1
RTN4R-204ENST00000463936 C19orf44Q9H6X5 657 aa21.91■■□□□ 1.1
RTN4R-204ENST00000463936 XRN1Q8IZH2 1706 aaKnown RBP21.9■■□□□ 1.1
RTN4R-204ENST00000463936 C14orf37Q86TY3 774 aa21.88■■□□□ 1.09
RTN4R-204ENST00000463936 NEXMIFQ5QGS0 1516 aa21.88■■□□□ 1.09
RTN4R-204ENST00000463936 LRP6O75581 1613 aa21.87■■□□□ 1.09
RTN4R-204ENST00000463936 JCADQ9P266 1359 aa21.87■■□□□ 1.09
RTN4R-204ENST00000463936 ZNF326Q5BKZ1 582 aaKnown RBP21.86■■□□□ 1.09
RTN4R-204ENST00000463936 BRINP3Q76B58 766 aa21.85■■□□□ 1.09
RTN4R-204ENST00000463936 CADPS2Q86UW7 1296 aa21.85■■□□□ 1.09
RTN4R-204ENST00000463936 AHDC1Q5TGY3 1603 aaPredicted RBP21.84■■□□□ 1.09
RTN4R-204ENST00000463936 ATF3P18847 181 aa21.84■■□□□ 1.09
RTN4R-204ENST00000463936 MST1RQ04912 1400 aa21.8■■□□□ 1.08
RTN4R-204ENST00000463936 HFM1A2PYH4 1435 aa21.8■■□□□ 1.08
RTN4R-204ENST00000463936 SETD1AO15047 1707 aaKnown RBP21.79■■□□□ 1.08
RTN4R-204ENST00000463936 KIF1BO60333 1816 aa21.78■■□□□ 1.08
RTN4R-204ENST00000463936 DDX17Q92841 729 aaKnown RBP21.78■■□□□ 1.08
RTN4R-204ENST00000463936 FOXD1Q16676 465 aa21.77■■□□□ 1.08
RTN4R-204ENST00000463936 TRIM52Q96A61 297 aa21.77■■□□□ 1.08
RTN4R-204ENST00000463936 DCCP43146 1447 aa21.77■■□□□ 1.08
RTN4R-204ENST00000463936 NALCNQ8IZF0 1738 aa21.77■■□□□ 1.08
RTN4R-204ENST00000463936 ASXL1Q8IXJ9 1541 aa21.76■■□□□ 1.07
RTN4R-204ENST00000463936 SHPRHQ149N8 1683 aa21.76■■□□□ 1.07
RTN4R-204ENST00000463936 SPATA31A6Q5VVP1 1343 aa21.75■■□□□ 1.07
RTN4R-204ENST00000463936 NHSL1Q5SYE7 1610 aa21.73■■□□□ 1.07
RTN4R-204ENST00000463936 ADGRL3Q9HAR2 1447 aa21.73■■□□□ 1.07
RTN4R-204ENST00000463936 ROBO2Q9HCK4 1378 aa21.73■■□□□ 1.07
RTN4R-204ENST00000463936 SLC4A1APQ9BWU0 796 aaKnown RBP21.72■■□□□ 1.07
RTN4R-204ENST00000463936 SETD5Q9C0A6 1442 aa21.71■■□□□ 1.07
RTN4R-204ENST00000463936 PPLO60437 1756 aa21.69■■□□□ 1.06
RTN4R-204ENST00000463936 NUTM2BA6NNL0 878 aaPredicted RBP21.69■■□□□ 1.06
RTN4R-204ENST00000463936 NUTM2EB1AL46 878 aaPredicted RBP21.69■■□□□ 1.06
RTN4R-204ENST00000463936 NUTM2AQ8IVF1 878 aaPredicted RBP21.69■■□□□ 1.06
RTN4R-204ENST00000463936 VGFO15240 615 aaPredicted RBP21.68■■□□□ 1.06
RTN4R-204ENST00000463936 C1orf167Q5SNV9 1468 aa21.66■■□□□ 1.06
RTN4R-204ENST00000463936 RPGRIP1LQ68CZ1 1315 aa21.65■■□□□ 1.06
RTN4R-204ENST00000463936 ADGRF5Q8IZF2 1346 aa21.65■■□□□ 1.06
RTN4R-204ENST00000463936 MEX3CQ5U5Q3 659 aaKnown RBP21.65■■□□□ 1.06
RTN4R-204ENST00000463936 ORAI2Q96SN7 254 aa21.65■■□□□ 1.06
RTN4R-204ENST00000463936 PTCH1Q13635 1447 aa21.64■■□□□ 1.06
RTN4R-204ENST00000463936 PRAG1Q86YV5 1406 aa21.63■■□□□ 1.05
RTN4R-204ENST00000463936 PNPLA6Q8IY17 1366 aa21.63■■□□□ 1.05
RTN4R-204ENST00000463936 SPATA31E1Q6ZUB1 1445 aa21.62■■□□□ 1.05
RTN4R-204ENST00000463936 ZNF772Q68DY9 489 aaPredicted RBP21.61■■□□□ 1.05
RTN4R-204ENST00000463936 LRRC59Q96AG4 307 aaKnown RBP21.61■■□□□ 1.05
RTN4R-204ENST00000463936 MPHOSPH9Q99550 1183 aa21.61■■□□□ 1.05
RTN4R-204ENST00000463936 LAMC1P11047 1609 aa21.61■■□□□ 1.05
RTN4R-204ENST00000463936 AFF2P51816 1311 aa21.59■■□□□ 1.05
RTN4R-204ENST00000463936 RGL3Q3MIN7 710 aa21.59■■□□□ 1.05
RTN4R-204ENST00000463936 SOS2Q07890 1332 aaPredicted RBP21.57■■□□□ 1.04
RTN4R-204ENST00000463936 IFT172Q9UG01 1749 aa21.57■■□□□ 1.04
RTN4R-204ENST00000463936 UPF1Q92900 1129 aaKnown RBP eCLIP21.56■■□□□ 1.04
RTN4R-204ENST00000463936 TMEM132EQ6IEE7 984 aa21.55■■□□□ 1.04
RTN4R-204ENST00000463936 WAPLQ7Z5K2 1190 aa21.55■■□□□ 1.04
RTN4R-204ENST00000463936 PLEKHH1Q9ULM0 1364 aa21.54■■□□□ 1.04
RTN4R-204ENST00000463936 RXRBP28702 533 aa21.54■■□□□ 1.04
RTN4R-204ENST00000463936 C8orf37Q96NL8 207 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms