RNA–Protein interactions for RNA: ENST00000463764.2

TRANK1-202, Transcript of tetratricopeptide repeat and ankyrin repeat containing 1, humanhuman

TSL 2

Gene TRANK1, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1-202ENST00000463764 RIMS2Q9UQ26 1411 aa16.84■□□□□ 0.29
TRANK1-202ENST00000463764 PPP1R15AO75807 674 aaPredicted RBP16.83■□□□□ 0.28
TRANK1-202ENST00000463764 DIP2AQ14689 1571 aa16.81■□□□□ 0.28
TRANK1-202ENST00000463764 PLEKHG1Q9ULL1 1385 aa16.8■□□□□ 0.28
TRANK1-202ENST00000463764 RPGRIP1LQ68CZ1 1315 aa16.8■□□□□ 0.28
TRANK1-202ENST00000463764 ZNF326Q5BKZ1 582 aaKnown RBP16.79■□□□□ 0.28
TRANK1-202ENST00000463764 CPS1P31327 1500 aa16.79■□□□□ 0.28
TRANK1-202ENST00000463764 NEXMIFQ5QGS0 1516 aa16.77■□□□□ 0.28
TRANK1-202ENST00000463764 LTKP29376 864 aa16.77■□□□□ 0.28
TRANK1-202ENST00000463764 IQSEC2Q5JU85 1478 aa16.77■□□□□ 0.28
TRANK1-202ENST00000463764 PPLO60437 1756 aa16.77■□□□□ 0.27
TRANK1-202ENST00000463764 FOXD1Q16676 465 aa16.76■□□□□ 0.27
TRANK1-202ENST00000463764 ANKRD30BQ9BXX2 1392 aa16.76■□□□□ 0.27
TRANK1-202ENST00000463764 SETBP1Q9Y6X0 1596 aa16.75■□□□□ 0.27
TRANK1-202ENST00000463764 SPATA31E1Q6ZUB1 1445 aa16.74■□□□□ 0.27
TRANK1-202ENST00000463764 VGFO15240 615 aaPredicted RBP16.74■□□□□ 0.27
TRANK1-202ENST00000463764 BCANQ96GW7 911 aa16.74■□□□□ 0.27
TRANK1-202ENST00000463764 IFT172Q9UG01 1749 aa16.73■□□□□ 0.27
TRANK1-202ENST00000463764 LTBP4Q8N2S1 1624 aa16.73■□□□□ 0.27
TRANK1-202ENST00000463764 PIK3R4Q99570 1358 aa16.72■□□□□ 0.27
TRANK1-202ENST00000463764 NWD1Q149M9 1564 aa16.7■□□□□ 0.26
TRANK1-202ENST00000463764 NKTRP30414 1462 aaKnown RBP16.7■□□□□ 0.26
TRANK1-202ENST00000463764 STAC3Q96MF2 364 aa16.7■□□□□ 0.26
TRANK1-202ENST00000463764 ZNF335Q9H4Z2 1342 aaPredicted RBP16.7■□□□□ 0.26
TRANK1-202ENST00000463764 TBX22Q9Y458 520 aa16.69■□□□□ 0.26
TRANK1-202ENST00000463764 MYOM2P54296 1465 aa16.68■□□□□ 0.26
TRANK1-202ENST00000463764 LAMC1P11047 1609 aa16.68■□□□□ 0.26
TRANK1-202ENST00000463764 CERKQ8TCT0 537 aa16.68■□□□□ 0.26
TRANK1-202ENST00000463764 CHD2O14647 1828 aaKnown RBP16.68■□□□□ 0.26
TRANK1-202ENST00000463764 NRXN3Q9Y4C0 1643 aa16.67■□□□□ 0.26
TRANK1-202ENST00000463764 ADAMTS13Q76LX8 1427 aa16.66■□□□□ 0.26
TRANK1-202ENST00000463764 SLC26A8Q96RN1 970 aa16.65■□□□□ 0.26
TRANK1-202ENST00000463764 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.26
TRANK1-202ENST00000463764 KCNA6P17658 529 aa16.64■□□□□ 0.25
TRANK1-202ENST00000463764 RGL3Q3MIN7 710 aa16.64■□□□□ 0.25
TRANK1-202ENST00000463764 STRCP1A6NGW2 1772 aa16.64■□□□□ 0.25
TRANK1-202ENST00000463764 NUTM2DQ5VT03 806 aaPredicted RBP16.63■□□□□ 0.25
TRANK1-202ENST00000463764 SETD1AO15047 1707 aaKnown RBP16.62■□□□□ 0.25
TRANK1-202ENST00000463764 PIK3C2GO75747 1445 aa16.62■□□□□ 0.25
TRANK1-202ENST00000463764 NRXN1Q9ULB1 1477 aa16.61■□□□□ 0.25
TRANK1-202ENST00000463764 ALKQ9UM73 1620 aa16.61■□□□□ 0.25
TRANK1-202ENST00000463764 XRN1Q8IZH2 1706 aaKnown RBP16.61■□□□□ 0.25
TRANK1-202ENST00000463764 PCGF6Q9BYE7 350 aa16.6■□□□□ 0.25
TRANK1-202ENST00000463764 NCOA3Q9Y6Q9 1424 aa16.6■□□□□ 0.25
TRANK1-202ENST00000463764 LRRC7Q96NW7 1537 aa16.6■□□□□ 0.25
TRANK1-202ENST00000463764 PRAG1Q86YV5 1406 aa16.59■□□□□ 0.25
TRANK1-202ENST00000463764 FBXO41Q8TF61 875 aa16.57■□□□□ 0.24
TRANK1-202ENST00000463764 CLSPNQ9HAW4 1339 aa16.56■□□□□ 0.24
TRANK1-202ENST00000463764 KNDC1Q76NI1 1749 aa16.56■□□□□ 0.24
TRANK1-202ENST00000463764 PTCH1Q13635 1447 aa16.55■□□□□ 0.24
TRANK1-202ENST00000463764 ADGRF5Q8IZF2 1346 aa16.55■□□□□ 0.24
TRANK1-202ENST00000463764 KIAA1210Q9ULL0 1709 aa16.55■□□□□ 0.24
TRANK1-202ENST00000463764 XIRP1Q702N8 1843 aaKnown RBP16.54■□□□□ 0.24
TRANK1-202ENST00000463764 PROSER2Q86WR7 435 aaPredicted RBP16.54■□□□□ 0.24
TRANK1-202ENST00000463764 DCAF11Q8TEB1 546 aa16.54■□□□□ 0.24
TRANK1-202ENST00000463764 METP08581 1390 aa16.53■□□□□ 0.24
TRANK1-202ENST00000463764 TMEM94Q12767 1356 aa16.53■□□□□ 0.24
TRANK1-202ENST00000463764 TOM1O60784 492 aa16.53■□□□□ 0.24
TRANK1-202ENST00000463764 AMOTL2Q9Y2J4 779 aa16.53■□□□□ 0.24
TRANK1-202ENST00000463764 MSH6P52701 1360 aa16.52■□□□□ 0.24
TRANK1-202ENST00000463764 SENP3Q9H4L4 574 aaPredicted RBP16.52■□□□□ 0.24
TRANK1-202ENST00000463764 C14orf93Q9H972 538 aaKnown RBP16.51■□□□□ 0.23
TRANK1-202ENST00000463764 TECPR2O15040 1411 aa16.51■□□□□ 0.23
TRANK1-202ENST00000463764 PTPRUQ92729 1446 aa16.51■□□□□ 0.23
TRANK1-202ENST00000463764 DCCP43146 1447 aa16.5■□□□□ 0.23
TRANK1-202ENST00000463764 LRPPRCP42704 1394 aaKnown RBP16.5■□□□□ 0.23
TRANK1-202ENST00000463764 TONSLQ96HA7 1378 aa16.5■□□□□ 0.23
TRANK1-202ENST00000463764 C14orf37Q86TY3 774 aa16.49■□□□□ 0.23
TRANK1-202ENST00000463764 UBAP1LF5GYI3 381 aa16.48■□□□□ 0.23
TRANK1-202ENST00000463764 KDM2AQ9Y2K7 1162 aa16.48■□□□□ 0.23
TRANK1-202ENST00000463764 ABCC11Q96J66 1382 aa16.48■□□□□ 0.23
TRANK1-202ENST00000463764 YTHDC2Q9H6S0 1430 aaKnown RBP16.47■□□□□ 0.23
TRANK1-202ENST00000463764 ASXL1Q8IXJ9 1541 aa16.47■□□□□ 0.23
TRANK1-202ENST00000463764 ADGRL3Q9HAR2 1447 aa16.46■□□□□ 0.23
TRANK1-202ENST00000463764 DLC1Q96QB1 1528 aa16.46■□□□□ 0.23
TRANK1-202ENST00000463764 NEUROD1Q13562 356 aa16.46■□□□□ 0.23
TRANK1-202ENST00000463764 FAM135BQ49AJ0 1406 aa16.45■□□□□ 0.22
TRANK1-202ENST00000463764 SIN3AQ96ST3 1273 aa16.45■□□□□ 0.22
TRANK1-202ENST00000463764 C19orf44Q9H6X5 657 aa16.45■□□□□ 0.22
TRANK1-202ENST00000463764 ADGRB1O14514 1584 aa16.45■□□□□ 0.22
TRANK1-202ENST00000463764 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.45■□□□□ 0.22
TRANK1-202ENST00000463764 CADPS2Q86UW7 1296 aa16.44■□□□□ 0.22
TRANK1-202ENST00000463764 SIRT1Q96EB6 747 aa16.44■□□□□ 0.22
TRANK1-202ENST00000463764 NALCNQ8IZF0 1738 aa16.43■□□□□ 0.22
TRANK1-202ENST00000463764 ATF3P18847 181 aa16.43■□□□□ 0.22
TRANK1-202ENST00000463764 CFAP70Q5T0N1 1121 aa16.43■□□□□ 0.22
TRANK1-202ENST00000463764 L3MBTL2Q969R5 705 aa16.43■□□□□ 0.22
TRANK1-202ENST00000463764 TIMELESSQ9UNS1 1208 aa16.43■□□□□ 0.22
TRANK1-202ENST00000463764 CDC42BPGQ6DT37 1551 aa16.42■□□□□ 0.22
TRANK1-202ENST00000463764 ROBO2Q9HCK4 1378 aa16.41■□□□□ 0.22
TRANK1-202ENST00000463764 TRPM1Q7Z4N2 1603 aa16.41■□□□□ 0.22
TRANK1-202ENST00000463764 TMEM132EQ6IEE7 984 aa16.39■□□□□ 0.21
TRANK1-202ENST00000463764 CCER1Q8TC90 406 aaPredicted RBP16.39■□□□□ 0.21
TRANK1-202ENST00000463764 STK26Q9P289 416 aa16.39■□□□□ 0.21
TRANK1-202ENST00000463764 ILDR1Q86SU0 546 aaPredicted RBP16.38■□□□□ 0.21
TRANK1-202ENST00000463764 ARHGEF28Q8N1W1 1705 aaKnown RBP16.38■□□□□ 0.21
TRANK1-202ENST00000463764 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
TRANK1-202ENST00000463764 ADGRB2O60241 1585 aa16.36■□□□□ 0.21
TRANK1-202ENST00000463764 ROBO1Q9Y6N7 1651 aa16.36■□□□□ 0.21
TRANK1-202ENST00000463764 EIF3AQ14152 1382 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms