RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 SLC4A1APQ9BWU0 796 aaKnown RBP20.04■□□□□ 0.8
COMMD3-205ENST00000463688 PLEKHG1Q9ULL1 1385 aa20.04■□□□□ 0.8
COMMD3-205ENST00000463688 TBX22Q9Y458 520 aa20.03■□□□□ 0.8
COMMD3-205ENST00000463688 RIMS2Q9UQ26 1411 aa20.03■□□□□ 0.8
COMMD3-205ENST00000463688 ZNF326Q5BKZ1 582 aaKnown RBP20■□□□□ 0.79
COMMD3-205ENST00000463688 SLC26A8Q96RN1 970 aa19.99■□□□□ 0.79
COMMD3-205ENST00000463688 PIK3R4Q99570 1358 aa19.99■□□□□ 0.79
COMMD3-205ENST00000463688 SCAF1Q9H7N4 1312 aaKnown RBP19.98■□□□□ 0.79
COMMD3-205ENST00000463688 ZFYVE9O95405 1425 aa19.97■□□□□ 0.79
COMMD3-205ENST00000463688 E9PCH4 1651 aa19.96■□□□□ 0.79
COMMD3-205ENST00000463688 PROSER2Q86WR7 435 aaPredicted RBP19.96■□□□□ 0.79
COMMD3-205ENST00000463688 RPGRIP1LQ68CZ1 1315 aa19.96■□□□□ 0.79
COMMD3-205ENST00000463688 LRRC7Q96NW7 1537 aa19.95■□□□□ 0.78
COMMD3-205ENST00000463688 VGFO15240 615 aaPredicted RBP19.94■□□□□ 0.78
COMMD3-205ENST00000463688 PIP4K2BP78356 416 aa19.94■□□□□ 0.78
COMMD3-205ENST00000463688 FOXD1Q16676 465 aa19.94■□□□□ 0.78
COMMD3-205ENST00000463688 TMEM131LA2VDJ0 1609 aa19.94■□□□□ 0.78
COMMD3-205ENST00000463688 NKTRP30414 1462 aaKnown RBP19.93■□□□□ 0.78
COMMD3-205ENST00000463688 NCOA3Q9Y6Q9 1424 aa19.93■□□□□ 0.78
COMMD3-205ENST00000463688 TRPM2O94759 1503 aa19.9■□□□□ 0.78
COMMD3-205ENST00000463688 MSH6P52701 1360 aa19.9■□□□□ 0.78
COMMD3-205ENST00000463688 HRCP23327 699 aa19.89■□□□□ 0.77
COMMD3-205ENST00000463688 MPHOSPH9Q99550 1183 aa19.89■□□□□ 0.77
COMMD3-205ENST00000463688 DIP2AQ14689 1571 aa19.89■□□□□ 0.77
COMMD3-205ENST00000463688 TMEM94Q12767 1356 aa19.89■□□□□ 0.77
COMMD3-205ENST00000463688 SETD5Q9C0A6 1442 aa19.89■□□□□ 0.77
COMMD3-205ENST00000463688 C14orf37Q86TY3 774 aa19.86■□□□□ 0.77
COMMD3-205ENST00000463688 SPHKAPQ2M3C7 1700 aa19.85■□□□□ 0.77
COMMD3-205ENST00000463688 CCDC144AA2RUR9 1427 aa19.85■□□□□ 0.77
COMMD3-205ENST00000463688 CADPS2Q86UW7 1296 aa19.84■□□□□ 0.77
COMMD3-205ENST00000463688 NUTM2DQ5VT03 806 aaPredicted RBP19.83■□□□□ 0.76
COMMD3-205ENST00000463688 C19orf44Q9H6X5 657 aa19.83■□□□□ 0.76
COMMD3-205ENST00000463688 FAM135BQ49AJ0 1406 aa19.81■□□□□ 0.76
COMMD3-205ENST00000463688 ATF3P18847 181 aa19.81■□□□□ 0.76
COMMD3-205ENST00000463688 HSPA1LP34931 641 aa19.81■□□□□ 0.76
COMMD3-205ENST00000463688 AMOTL2Q9Y2J4 779 aa19.81■□□□□ 0.76
COMMD3-205ENST00000463688 ADAMTS13Q76LX8 1427 aa19.81■□□□□ 0.76
COMMD3-205ENST00000463688 NWD1Q149M9 1564 aa19.8■□□□□ 0.76
COMMD3-205ENST00000463688 DISP3Q9P2K9 1392 aa19.8■□□□□ 0.76
COMMD3-205ENST00000463688 ANKRD30BQ9BXX2 1392 aa19.79■□□□□ 0.76
COMMD3-205ENST00000463688 SLAIN2Q9P270 581 aa19.78■□□□□ 0.76
COMMD3-205ENST00000463688 SETBP1Q9Y6X0 1596 aa19.77■□□□□ 0.75
COMMD3-205ENST00000463688 STAC3Q96MF2 364 aa19.76■□□□□ 0.75
COMMD3-205ENST00000463688 RAB3GAP2Q9H2M9 1393 aa19.75■□□□□ 0.75
COMMD3-205ENST00000463688 STRCP1A6NGW2 1772 aa19.74■□□□□ 0.75
COMMD3-205ENST00000463688 KIF1BO60333 1816 aa19.73■□□□□ 0.75
COMMD3-205ENST00000463688 CLTCL1P53675 1640 aa19.73■□□□□ 0.75
COMMD3-205ENST00000463688 MYO5BQ9ULV0 1848 aa19.72■□□□□ 0.75
COMMD3-205ENST00000463688 DCCP43146 1447 aa19.72■□□□□ 0.75
COMMD3-205ENST00000463688 NEXMIFQ5QGS0 1516 aa19.71■□□□□ 0.75
COMMD3-205ENST00000463688 CHD2O14647 1828 aaKnown RBP19.7■□□□□ 0.74
COMMD3-205ENST00000463688 RGL3Q3MIN7 710 aa19.69■□□□□ 0.74
COMMD3-205ENST00000463688 RBM33Q96EV2 1170 aaKnown RBP19.68■□□□□ 0.74
COMMD3-205ENST00000463688 METP08581 1390 aa19.67■□□□□ 0.74
COMMD3-205ENST00000463688 PTCH1Q13635 1447 aa19.65■□□□□ 0.74
COMMD3-205ENST00000463688 SPATA31E1Q6ZUB1 1445 aa19.65■□□□□ 0.74
COMMD3-205ENST00000463688 ALKQ9UM73 1620 aa19.64■□□□□ 0.73
COMMD3-205ENST00000463688 PRAG1Q86YV5 1406 aa19.63■□□□□ 0.73
COMMD3-205ENST00000463688 PTPRUQ92729 1446 aa19.63■□□□□ 0.73
COMMD3-205ENST00000463688 ADGRL3Q9HAR2 1447 aa19.6■□□□□ 0.73
COMMD3-205ENST00000463688 SIRT1Q96EB6 747 aa19.59■□□□□ 0.73
COMMD3-205ENST00000463688 JCADQ9P266 1359 aa19.59■□□□□ 0.73
COMMD3-205ENST00000463688 NRXN3Q9Y4C0 1643 aa19.59■□□□□ 0.73
COMMD3-205ENST00000463688 XIRP1Q702N8 1843 aaKnown RBP19.58■□□□□ 0.73
COMMD3-205ENST00000463688 ADGRF5Q8IZF2 1346 aa19.58■□□□□ 0.72
COMMD3-205ENST00000463688 DHX57Q6P158 1386 aaKnown RBP19.57■□□□□ 0.72
COMMD3-205ENST00000463688 C14orf93Q9H972 538 aaKnown RBP19.57■□□□□ 0.72
COMMD3-205ENST00000463688 ABCC11Q96J66 1382 aa19.56■□□□□ 0.72
COMMD3-205ENST00000463688 XRN1Q8IZH2 1706 aaKnown RBP19.56■□□□□ 0.72
COMMD3-205ENST00000463688 LRPPRCP42704 1394 aaKnown RBP19.56■□□□□ 0.72
COMMD3-205ENST00000463688 SPATA31A6Q5VVP1 1343 aa19.55■□□□□ 0.72
COMMD3-205ENST00000463688 PIK3C2GO75747 1445 aa19.54■□□□□ 0.72
COMMD3-205ENST00000463688 BRINP3Q76B58 766 aa19.54■□□□□ 0.72
COMMD3-205ENST00000463688 LRRC59Q96AG4 307 aaKnown RBP19.54■□□□□ 0.72
COMMD3-205ENST00000463688 MYOM2P54296 1465 aa19.54■□□□□ 0.72
COMMD3-205ENST00000463688 ROBO1Q9Y6N7 1651 aa19.53■□□□□ 0.72
COMMD3-205ENST00000463688 PPLO60437 1756 aa19.53■□□□□ 0.72
COMMD3-205ENST00000463688 ROBO2Q9HCK4 1378 aa19.52■□□□□ 0.72
COMMD3-205ENST00000463688 TECPR2O15040 1411 aa19.52■□□□□ 0.71
COMMD3-205ENST00000463688 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.52■□□□□ 0.71
COMMD3-205ENST00000463688 MED1Q15648 1581 aaPredicted RBP19.51■□□□□ 0.71
COMMD3-205ENST00000463688 SOCS7O14512 581 aa19.51■□□□□ 0.71
COMMD3-205ENST00000463688 STK26Q9P289 416 aa19.51■□□□□ 0.71
COMMD3-205ENST00000463688 DCAF11Q8TEB1 546 aa19.5■□□□□ 0.71
COMMD3-205ENST00000463688 MST1RQ04912 1400 aa19.49■□□□□ 0.71
COMMD3-205ENST00000463688 NRXN1Q9ULB1 1477 aa19.47■□□□□ 0.71
COMMD3-205ENST00000463688 YTHDC2Q9H6S0 1430 aaKnown RBP19.47■□□□□ 0.71
COMMD3-205ENST00000463688 MEX3CQ5U5Q3 659 aaKnown RBP19.46■□□□□ 0.71
COMMD3-205ENST00000463688 TMEM132EQ6IEE7 984 aa19.46■□□□□ 0.71
COMMD3-205ENST00000463688 POGKQ9P215 609 aa19.46■□□□□ 0.71
COMMD3-205ENST00000463688 AHDC1Q5TGY3 1603 aaPredicted RBP19.46■□□□□ 0.71
COMMD3-205ENST00000463688 CFAP70Q5T0N1 1121 aa19.45■□□□□ 0.7
COMMD3-205ENST00000463688 C1orf167Q5SNV9 1468 aa19.45■□□□□ 0.7
COMMD3-205ENST00000463688 KDM2AQ9Y2K7 1162 aa19.44■□□□□ 0.7
COMMD3-205ENST00000463688 NPHP3Q7Z494 1330 aa19.44■□□□□ 0.7
COMMD3-205ENST00000463688 LAMC1P11047 1609 aa19.44■□□□□ 0.7
COMMD3-205ENST00000463688 ASXL1Q8IXJ9 1541 aa19.43■□□□□ 0.7
COMMD3-205ENST00000463688 ILDR2Q71H61 639 aa19.43■□□□□ 0.7
COMMD3-205ENST00000463688 PHLPP1O60346 1717 aa19.43■□□□□ 0.7
COMMD3-205ENST00000463688 ZNF772Q68DY9 489 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms