RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 ROBO1Q9Y6N7 1651 aa35.9■■■■□ 3.34
SSNA1-203ENST00000463511 NKTRP30414 1462 aaKnown RBP35.88■■■■□ 3.33
SSNA1-203ENST00000463511 TMEM131LA2VDJ0 1609 aa35.88■■■■□ 3.33
SSNA1-203ENST00000463511 CHD2O14647 1828 aaKnown RBP35.86■■■■□ 3.33
SSNA1-203ENST00000463511 E9PCH4 1651 aa35.86■■■■□ 3.33
SSNA1-203ENST00000463511 ZFYVE9O95405 1425 aa35.85■■■■□ 3.33
SSNA1-203ENST00000463511 FAM135BQ49AJ0 1406 aa35.85■■■■□ 3.33
SSNA1-203ENST00000463511 PROSER2Q86WR7 435 aaPredicted RBP35.85■■■■□ 3.33
SSNA1-203ENST00000463511 RBM33Q96EV2 1170 aaKnown RBP35.85■■■■□ 3.33
SSNA1-203ENST00000463511 BCANQ96GW7 911 aa35.84■■■■□ 3.33
SSNA1-203ENST00000463511 RIMS2Q9UQ26 1411 aa35.79■■■■□ 3.32
SSNA1-203ENST00000463511 IQGAP3Q86VI3 1631 aa35.79■■■■□ 3.32
SSNA1-203ENST00000463511 PLEKHG1Q9ULL1 1385 aa35.77■■■■□ 3.32
SSNA1-203ENST00000463511 PPP1R15AO75807 674 aaPredicted RBP35.74■■■■□ 3.31
SSNA1-203ENST00000463511 MSH6P52701 1360 aa35.73■■■■□ 3.31
SSNA1-203ENST00000463511 ROCK1Q13464 1354 aa35.71■■■■□ 3.31
SSNA1-203ENST00000463511 PHLPP1O60346 1717 aa35.71■■■■□ 3.31
SSNA1-203ENST00000463511 RGS17Q9UGC6 210 aaPredicted RBP35.7■■■■□ 3.31
SSNA1-203ENST00000463511 CHGAP10645 457 aaKnown RBP35.68■■■■□ 3.3
SSNA1-203ENST00000463511 HDGFP51858 240 aaKnown RBP35.67■■■■□ 3.3
SSNA1-203ENST00000463511 DIP2AQ14689 1571 aa35.64■■■■□ 3.3
SSNA1-203ENST00000463511 ADAMTS13Q76LX8 1427 aa35.6■■■■□ 3.29
SSNA1-203ENST00000463511 NUTM2DQ5VT03 806 aaPredicted RBP35.6■■■■□ 3.29
SSNA1-203ENST00000463511 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.6■■■■□ 3.29
SSNA1-203ENST00000463511 SLAIN2Q9P270 581 aa35.59■■■■□ 3.29
SSNA1-203ENST00000463511 TBX22Q9Y458 520 aa35.59■■■■□ 3.29
SSNA1-203ENST00000463511 SPHKAPQ2M3C7 1700 aa35.58■■■■□ 3.29
SSNA1-203ENST00000463511 ITGAEP38570 1179 aa35.58■■■■□ 3.29
SSNA1-203ENST00000463511 NUP155O75694 1391 aa35.58■■■■□ 3.29
SSNA1-203ENST00000463511 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.57■■■■□ 3.29
SSNA1-203ENST00000463511 COL16A1Q07092 1604 aaPredicted RBP35.55■■■■□ 3.28
SSNA1-203ENST00000463511 TRPM2O94759 1503 aa35.52■■■■□ 3.28
SSNA1-203ENST00000463511 NCOA3Q9Y6Q9 1424 aa35.52■■■■□ 3.28
SSNA1-203ENST00000463511 C14orf37Q86TY3 774 aa35.5■■■■□ 3.27
SSNA1-203ENST00000463511 POTEAQ6S8J7 498 aa35.49■■■■□ 3.27
SSNA1-203ENST00000463511 PPARGC1BQ86YN6 1023 aaKnown RBP35.49■■■■□ 3.27
SSNA1-203ENST00000463511 PIK3R4Q99570 1358 aa35.49■■■■□ 3.27
SSNA1-203ENST00000463511 NRXN3Q9Y4C0 1643 aa35.48■■■■□ 3.27
SSNA1-203ENST00000463511 JCADQ9P266 1359 aa35.47■■■■□ 3.27
SSNA1-203ENST00000463511 XRN1Q8IZH2 1706 aaKnown RBP35.43■■■■□ 3.26
SSNA1-203ENST00000463511 PTPRUQ92729 1446 aa35.42■■■■□ 3.26
SSNA1-203ENST00000463511 SETD1AO15047 1707 aaKnown RBP35.42■■■■□ 3.26
SSNA1-203ENST00000463511 AHDC1Q5TGY3 1603 aaPredicted RBP35.42■■■■□ 3.26
SSNA1-203ENST00000463511 SETBP1Q9Y6X0 1596 aa35.41■■■■□ 3.26
SSNA1-203ENST00000463511 CADPS2Q86UW7 1296 aa35.39■■■■□ 3.26
SSNA1-203ENST00000463511 C19orf44Q9H6X5 657 aa35.39■■■■□ 3.26
SSNA1-203ENST00000463511 SHPRHQ149N8 1683 aa35.38■■■■□ 3.25
SSNA1-203ENST00000463511 AMOTL2Q9Y2J4 779 aa35.38■■■■□ 3.25
SSNA1-203ENST00000463511 CLTCL1P53675 1640 aa35.37■■■■□ 3.25
SSNA1-203ENST00000463511 ATF3P18847 181 aa35.37■■■■□ 3.25
SSNA1-203ENST00000463511 LRP6O75581 1613 aa35.35■■■■□ 3.25
SSNA1-203ENST00000463511 KIF1BO60333 1816 aa35.34■■■■□ 3.25
SSNA1-203ENST00000463511 ZNF326Q5BKZ1 582 aaKnown RBP35.31■■■■□ 3.24
SSNA1-203ENST00000463511 NEXMIFQ5QGS0 1516 aa35.29■■■■□ 3.24
SSNA1-203ENST00000463511 DCCP43146 1447 aa35.28■■■■□ 3.24
SSNA1-203ENST00000463511 SPATA31A6Q5VVP1 1343 aa35.27■■■■□ 3.24
SSNA1-203ENST00000463511 NALCNQ8IZF0 1738 aa35.25■■■■□ 3.23
SSNA1-203ENST00000463511 METP08581 1390 aa35.25■■■■□ 3.23
SSNA1-203ENST00000463511 NHSL1Q5SYE7 1610 aa35.24■■■■□ 3.23
SSNA1-203ENST00000463511 ASXL1Q8IXJ9 1541 aa35.24■■■■□ 3.23
SSNA1-203ENST00000463511 BRINP3Q76B58 766 aa35.24■■■■□ 3.23
SSNA1-203ENST00000463511 RRBP1Q9P2E9 1410 aaKnown RBP35.23■■■■□ 3.23
SSNA1-203ENST00000463511 MEX3CQ5U5Q3 659 aaKnown RBP35.21■■■■□ 3.23
SSNA1-203ENST00000463511 NAIPQ13075 1403 aa35.21■■■■□ 3.23
SSNA1-203ENST00000463511 MST1RQ04912 1400 aa35.2■■■■□ 3.23
SSNA1-203ENST00000463511 ADGRL3Q9HAR2 1447 aa35.15■■■■□ 3.22
SSNA1-203ENST00000463511 ZNF772Q68DY9 489 aaPredicted RBP35.1■■■■□ 3.21
SSNA1-203ENST00000463511 SETD5Q9C0A6 1442 aa35.09■■■■□ 3.21
SSNA1-203ENST00000463511 NUTM2BA6NNL0 878 aaPredicted RBP35.09■■■■□ 3.21
SSNA1-203ENST00000463511 NUTM2EB1AL46 878 aaPredicted RBP35.09■■■■□ 3.21
SSNA1-203ENST00000463511 NUTM2AQ8IVF1 878 aaPredicted RBP35.09■■■■□ 3.21
SSNA1-203ENST00000463511 PPLO60437 1756 aa35.08■■■■□ 3.21
SSNA1-203ENST00000463511 HFM1A2PYH4 1435 aa35.04■■■■□ 3.2
SSNA1-203ENST00000463511 TRIM52Q96A61 297 aa35.03■■■■□ 3.2
SSNA1-203ENST00000463511 PTCH1Q13635 1447 aa35.01■■■■□ 3.2
SSNA1-203ENST00000463511 DDX17Q92841 729 aaKnown RBP35.01■■■■□ 3.2
SSNA1-203ENST00000463511 LAMC1P11047 1609 aa34.98■■■■□ 3.19
SSNA1-203ENST00000463511 VGFO15240 615 aaPredicted RBP34.97■■■■□ 3.19
SSNA1-203ENST00000463511 LRRC59Q96AG4 307 aaKnown RBP34.97■■■■□ 3.19
SSNA1-203ENST00000463511 C1orf167Q5SNV9 1468 aa34.97■■■■□ 3.19
SSNA1-203ENST00000463511 ROBO2Q9HCK4 1378 aa34.96■■■■□ 3.19
SSNA1-203ENST00000463511 AFF2P51816 1311 aa34.95■■■■□ 3.19
SSNA1-203ENST00000463511 PNPLA6Q8IY17 1366 aa34.95■■■■□ 3.19
SSNA1-203ENST00000463511 SLC4A1APQ9BWU0 796 aaKnown RBP34.94■■■■□ 3.18
SSNA1-203ENST00000463511 RXRBP28702 533 aa34.93■■■■□ 3.18
SSNA1-203ENST00000463511 PRAG1Q86YV5 1406 aa34.91■■■■□ 3.18
SSNA1-203ENST00000463511 RPGRIP1LQ68CZ1 1315 aa34.9■■■■□ 3.18
SSNA1-203ENST00000463511 CDK12Q9NYV4 1490 aaPredicted RBP34.9■■■■□ 3.18
SSNA1-203ENST00000463511 UPF1Q92900 1129 aaKnown RBP eCLIP34.88■■■■□ 3.17
SSNA1-203ENST00000463511 C8orf37Q96NL8 207 aa34.87■■■■□ 3.17
SSNA1-203ENST00000463511 IFT172Q9UG01 1749 aa34.85■■■■□ 3.17
SSNA1-203ENST00000463511 ORAI2Q96SN7 254 aa34.83■■■■□ 3.17
SSNA1-203ENST00000463511 FOXD1Q16676 465 aa34.82■■■■□ 3.16
SSNA1-203ENST00000463511 CDC42BPGQ6DT37 1551 aa34.8■■■■□ 3.16
SSNA1-203ENST00000463511 SOS2Q07890 1332 aaPredicted RBP34.79■■■■□ 3.16
SSNA1-203ENST00000463511 RGS12O14924 1447 aa34.78■■■■□ 3.16
SSNA1-203ENST00000463511 ADAMTS2O95450 1211 aa34.77■■■■□ 3.16
SSNA1-203ENST00000463511 COL22A1Q8NFW1 1626 aaPredicted RBP34.77■■■■□ 3.16
SSNA1-203ENST00000463511 CCDC144AA2RUR9 1427 aa34.76■■■■□ 3.16
SSNA1-203ENST00000463511 QTRT2Q9H974 415 aaKnown RBP34.75■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms