RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 ROBO1Q9Y6N7 1651 aa32.27■■■□□ 2.76
CPSF7-209ENST00000463244 FAM50AQ14320 339 aaKnown RBP32.25■■■□□ 2.75
CPSF7-209ENST00000463244 MYO5BQ9ULV0 1848 aa32.25■■■□□ 2.75
CPSF7-209ENST00000463244 RBM33Q96EV2 1170 aaKnown RBP32.24■■■□□ 2.75
CPSF7-209ENST00000463244 ZFYVE9O95405 1425 aa32.23■■■□□ 2.75
CPSF7-209ENST00000463244 GCC2Q8IWJ2 1684 aa32.21■■■□□ 2.75
CPSF7-209ENST00000463244 BCANQ96GW7 911 aa32.19■■■□□ 2.74
CPSF7-209ENST00000463244 CHD2O14647 1828 aaKnown RBP32.19■■■□□ 2.74
CPSF7-209ENST00000463244 PLEKHG1Q9ULL1 1385 aa32.19■■■□□ 2.74
CPSF7-209ENST00000463244 TMEM131LA2VDJ0 1609 aa32.18■■■□□ 2.74
CPSF7-209ENST00000463244 MSH6P52701 1360 aa32.17■■■□□ 2.74
CPSF7-209ENST00000463244 RIMS2Q9UQ26 1411 aa32.17■■■□□ 2.74
CPSF7-209ENST00000463244 UNC13BO14795 1591 aa32.15■■■□□ 2.74
CPSF7-209ENST00000463244 HDGFP51858 240 aaKnown RBP32.12■■■□□ 2.73
CPSF7-209ENST00000463244 PPP1R15AO75807 674 aaPredicted RBP32.11■■■□□ 2.73
CPSF7-209ENST00000463244 E9PCH4 1651 aa32.09■■■□□ 2.73
CPSF7-209ENST00000463244 SLAIN2Q9P270 581 aa32.09■■■□□ 2.73
CPSF7-209ENST00000463244 PHLPP1O60346 1717 aa32.08■■■□□ 2.73
CPSF7-209ENST00000463244 POTEAQ6S8J7 498 aa32.07■■■□□ 2.72
CPSF7-209ENST00000463244 TBX22Q9Y458 520 aa32.06■■■□□ 2.72
CPSF7-209ENST00000463244 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.04■■■□□ 2.72
CPSF7-209ENST00000463244 IQGAP3Q86VI3 1631 aa32.04■■■□□ 2.72
CPSF7-209ENST00000463244 NCOA3Q9Y6Q9 1424 aa32.03■■■□□ 2.72
CPSF7-209ENST00000463244 ROCK1Q13464 1354 aa32.03■■■□□ 2.72
CPSF7-209ENST00000463244 ADAMTS13Q76LX8 1427 aa32.02■■■□□ 2.72
CPSF7-209ENST00000463244 CHGAP10645 457 aaKnown RBP32.02■■■□□ 2.72
CPSF7-209ENST00000463244 DIP2AQ14689 1571 aa32.01■■■□□ 2.71
CPSF7-209ENST00000463244 JCADQ9P266 1359 aa32■■■□□ 2.71
CPSF7-209ENST00000463244 COL16A1Q07092 1604 aaPredicted RBP31.98■■■□□ 2.71
CPSF7-209ENST00000463244 PIK3R4Q99570 1358 aa31.96■■■□□ 2.71
CPSF7-209ENST00000463244 NUTM2DQ5VT03 806 aaPredicted RBP31.96■■■□□ 2.71
CPSF7-209ENST00000463244 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.94■■■□□ 2.7
CPSF7-209ENST00000463244 C14orf37Q86TY3 774 aa31.92■■■□□ 2.7
CPSF7-209ENST00000463244 NUP155O75694 1391 aa31.91■■■□□ 2.7
CPSF7-209ENST00000463244 TRPM2O94759 1503 aa31.9■■■□□ 2.7
CPSF7-209ENST00000463244 CADPS2Q86UW7 1296 aa31.89■■■□□ 2.7
CPSF7-209ENST00000463244 C19orf44Q9H6X5 657 aa31.89■■■□□ 2.7
CPSF7-209ENST00000463244 AHDC1Q5TGY3 1603 aaPredicted RBP31.88■■■□□ 2.69
CPSF7-209ENST00000463244 PTPRUQ92729 1446 aa31.85■■■□□ 2.69
CPSF7-209ENST00000463244 ATF3P18847 181 aa31.85■■■□□ 2.69
CPSF7-209ENST00000463244 SETD1AO15047 1707 aaKnown RBP31.85■■■□□ 2.69
CPSF7-209ENST00000463244 SPATA31A6Q5VVP1 1343 aa31.84■■■□□ 2.69
CPSF7-209ENST00000463244 AMOTL2Q9Y2J4 779 aa31.84■■■□□ 2.69
CPSF7-209ENST00000463244 LRP6O75581 1613 aa31.84■■■□□ 2.69
CPSF7-209ENST00000463244 SHPRHQ149N8 1683 aa31.82■■■□□ 2.68
CPSF7-209ENST00000463244 NRXN3Q9Y4C0 1643 aa31.82■■■□□ 2.68
CPSF7-209ENST00000463244 SPHKAPQ2M3C7 1700 aa31.8■■■□□ 2.68
CPSF7-209ENST00000463244 ITGAEP38570 1179 aa31.8■■■□□ 2.68
CPSF7-209ENST00000463244 XRN1Q8IZH2 1706 aaKnown RBP31.79■■■□□ 2.68
CPSF7-209ENST00000463244 SETBP1Q9Y6X0 1596 aa31.79■■■□□ 2.68
CPSF7-209ENST00000463244 DCCP43146 1447 aa31.77■■■□□ 2.68
CPSF7-209ENST00000463244 BRINP3Q76B58 766 aa31.75■■■□□ 2.67
CPSF7-209ENST00000463244 MEX3CQ5U5Q3 659 aaKnown RBP31.73■■■□□ 2.67
CPSF7-209ENST00000463244 ZNF772Q68DY9 489 aaPredicted RBP31.71■■■□□ 2.67
CPSF7-209ENST00000463244 ZNF326Q5BKZ1 582 aaKnown RBP31.69■■■□□ 2.66
CPSF7-209ENST00000463244 ASXL1Q8IXJ9 1541 aa31.69■■■□□ 2.66
CPSF7-209ENST00000463244 METP08581 1390 aa31.68■■■□□ 2.66
CPSF7-209ENST00000463244 MST1RQ04912 1400 aa31.67■■■□□ 2.66
CPSF7-209ENST00000463244 NHSL1Q5SYE7 1610 aa31.66■■■□□ 2.66
CPSF7-209ENST00000463244 CLTCL1P53675 1640 aa31.65■■■□□ 2.66
CPSF7-209ENST00000463244 PPARGC1BQ86YN6 1023 aaKnown RBP31.64■■■□□ 2.66
CPSF7-209ENST00000463244 SETD5Q9C0A6 1442 aa31.64■■■□□ 2.66
CPSF7-209ENST00000463244 NEXMIFQ5QGS0 1516 aa31.64■■■□□ 2.66
CPSF7-209ENST00000463244 ADGRL3Q9HAR2 1447 aa31.61■■■□□ 2.65
CPSF7-209ENST00000463244 NUTM2BA6NNL0 878 aaPredicted RBP31.59■■■□□ 2.65
CPSF7-209ENST00000463244 NUTM2EB1AL46 878 aaPredicted RBP31.59■■■□□ 2.65
CPSF7-209ENST00000463244 NUTM2AQ8IVF1 878 aaPredicted RBP31.59■■■□□ 2.65
CPSF7-209ENST00000463244 TRIM52Q96A61 297 aa31.59■■■□□ 2.65
CPSF7-209ENST00000463244 KIF1BO60333 1816 aa31.59■■■□□ 2.65
CPSF7-209ENST00000463244 NALCNQ8IZF0 1738 aa31.58■■■□□ 2.65
CPSF7-209ENST00000463244 RXRBP28702 533 aa31.55■■■□□ 2.64
CPSF7-209ENST00000463244 UPF1Q92900 1129 aaKnown RBP eCLIP31.55■■■□□ 2.64
CPSF7-209ENST00000463244 LRRC59Q96AG4 307 aaKnown RBP31.55■■■□□ 2.64
CPSF7-209ENST00000463244 CDK12Q9NYV4 1490 aaPredicted RBP31.52■■■□□ 2.64
CPSF7-209ENST00000463244 NAIPQ13075 1403 aa31.52■■■□□ 2.64
CPSF7-209ENST00000463244 RRBP1Q9P2E9 1410 aaKnown RBP31.52■■■□□ 2.64
CPSF7-209ENST00000463244 AFF2P51816 1311 aa31.51■■■□□ 2.64
CPSF7-209ENST00000463244 DDX17Q92841 729 aaKnown RBP31.5■■■□□ 2.63
CPSF7-209ENST00000463244 PNPLA6Q8IY17 1366 aa31.48■■■□□ 2.63
CPSF7-209ENST00000463244 PTCH1Q13635 1447 aa31.48■■■□□ 2.63
CPSF7-209ENST00000463244 C1orf167Q5SNV9 1468 aa31.46■■■□□ 2.63
CPSF7-209ENST00000463244 LAMC1P11047 1609 aa31.45■■■□□ 2.62
CPSF7-209ENST00000463244 VGFO15240 615 aaPredicted RBP31.43■■■□□ 2.62
CPSF7-209ENST00000463244 C8orf37Q96NL8 207 aa31.42■■■□□ 2.62
CPSF7-209ENST00000463244 ROBO2Q9HCK4 1378 aa31.42■■■□□ 2.62
CPSF7-209ENST00000463244 PRAG1Q86YV5 1406 aa31.41■■■□□ 2.62
CPSF7-209ENST00000463244 QTRT2Q9H974 415 aaKnown RBP31.37■■■□□ 2.61
CPSF7-209ENST00000463244 RPGRIP1LQ68CZ1 1315 aa31.37■■■□□ 2.61
CPSF7-209ENST00000463244 HFM1A2PYH4 1435 aa31.37■■■□□ 2.61
CPSF7-209ENST00000463244 PPLO60437 1756 aa31.37■■■□□ 2.61
CPSF7-209ENST00000463244 RGS12O14924 1447 aa31.36■■■□□ 2.61
CPSF7-209ENST00000463244 SOS2Q07890 1332 aaPredicted RBP31.35■■■□□ 2.61
CPSF7-209ENST00000463244 RBM6P78332 1123 aaKnown RBP31.35■■■□□ 2.61
CPSF7-209ENST00000463244 ORAI2Q96SN7 254 aa31.34■■■□□ 2.61
CPSF7-209ENST00000463244 SLC4A1APQ9BWU0 796 aaKnown RBP31.32■■■□□ 2.6
CPSF7-209ENST00000463244 ADAMTS2O95450 1211 aa31.31■■■□□ 2.6
CPSF7-209ENST00000463244 NGLY1Q96IV0 654 aa31.3■■■□□ 2.6
CPSF7-209ENST00000463244 SRCAPQ6ZRS2 3230 aa31.3■■■□□ 2.6
CPSF7-209ENST00000463244 COL22A1Q8NFW1 1626 aaPredicted RBP31.25■■■□□ 2.59
CPSF7-209ENST00000463244 CDC42BPGQ6DT37 1551 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms