RNA–Protein interactions for RNA: ENST00000463077.5

COMMD2-201, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-201ENST00000463077 PPARGC1BQ86YN6 1023 aaKnown RBP31.72■■■□□ 2.67
COMMD2-201ENST00000463077 SLAIN2Q9P270 581 aa31.7■■■□□ 2.67
COMMD2-201ENST00000463077 ADGRL2O95490 1459 aa31.69■■■□□ 2.66
COMMD2-201ENST00000463077 MSH6P52701 1360 aa31.68■■■□□ 2.66
COMMD2-201ENST00000463077 ZFYVE9O95405 1425 aa31.67■■■□□ 2.66
COMMD2-201ENST00000463077 RPRD2Q5VT52 1461 aaKnown RBP31.67■■■□□ 2.66
COMMD2-201ENST00000463077 PLEKHG1Q9ULL1 1385 aa31.66■■■□□ 2.66
COMMD2-201ENST00000463077 BCANQ96GW7 911 aa31.63■■■□□ 2.65
COMMD2-201ENST00000463077 CHD2O14647 1828 aaKnown RBP31.62■■■□□ 2.65
COMMD2-201ENST00000463077 JCADQ9P266 1359 aa31.61■■■□□ 2.65
COMMD2-201ENST00000463077 HDGFP51858 240 aaKnown RBP31.6■■■□□ 2.65
COMMD2-201ENST00000463077 TBX22Q9Y458 520 aa31.6■■■□□ 2.65
COMMD2-201ENST00000463077 ANKRD50Q9ULJ7 1429 aa31.59■■■□□ 2.65
COMMD2-201ENST00000463077 NCOA3Q9Y6Q9 1424 aa31.59■■■□□ 2.65
COMMD2-201ENST00000463077 RIMS2Q9UQ26 1411 aa31.58■■■□□ 2.65
COMMD2-201ENST00000463077 PHLPP1O60346 1717 aa31.58■■■□□ 2.65
COMMD2-201ENST00000463077 TMEM131LA2VDJ0 1609 aa31.56■■■□□ 2.64
COMMD2-201ENST00000463077 MYO5BQ9ULV0 1848 aa31.55■■■□□ 2.64
COMMD2-201ENST00000463077 PPP1R15AO75807 674 aaPredicted RBP31.52■■■□□ 2.64
COMMD2-201ENST00000463077 COL16A1Q07092 1604 aaPredicted RBP31.51■■■□□ 2.63
COMMD2-201ENST00000463077 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.51■■■□□ 2.63
COMMD2-201ENST00000463077 GCC2Q8IWJ2 1684 aa31.51■■■□□ 2.63
COMMD2-201ENST00000463077 ADAMTS13Q76LX8 1427 aa31.49■■■□□ 2.63
COMMD2-201ENST00000463077 FAM50AQ14320 339 aaKnown RBP31.48■■■□□ 2.63
COMMD2-201ENST00000463077 SPATA31A6Q5VVP1 1343 aa31.47■■■□□ 2.63
COMMD2-201ENST00000463077 PIK3R4Q99570 1358 aa31.46■■■□□ 2.63
COMMD2-201ENST00000463077 C19orf44Q9H6X5 657 aa31.46■■■□□ 2.63
COMMD2-201ENST00000463077 CADPS2Q86UW7 1296 aa31.44■■■□□ 2.62
COMMD2-201ENST00000463077 RRBP1Q9P2E9 1410 aaKnown RBP31.43■■■□□ 2.62
COMMD2-201ENST00000463077 LRP6O75581 1613 aa31.42■■■□□ 2.62
COMMD2-201ENST00000463077 UNC13BO14795 1591 aa31.42■■■□□ 2.62
COMMD2-201ENST00000463077 SETD1AO15047 1707 aaKnown RBP31.41■■■□□ 2.62
COMMD2-201ENST00000463077 DIP2AQ14689 1571 aa31.41■■■□□ 2.62
COMMD2-201ENST00000463077 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.41■■■□□ 2.62
COMMD2-201ENST00000463077 AHDC1Q5TGY3 1603 aaPredicted RBP31.4■■■□□ 2.62
COMMD2-201ENST00000463077 CHGAP10645 457 aaKnown RBP31.39■■■□□ 2.62
COMMD2-201ENST00000463077 C14orf37Q86TY3 774 aa31.39■■■□□ 2.62
COMMD2-201ENST00000463077 NUTM2DQ5VT03 806 aaPredicted RBP31.38■■■□□ 2.61
COMMD2-201ENST00000463077 E9PCH4 1651 aa31.38■■■□□ 2.61
COMMD2-201ENST00000463077 ATF3P18847 181 aa31.37■■■□□ 2.61
COMMD2-201ENST00000463077 ZNF772Q68DY9 489 aaPredicted RBP31.37■■■□□ 2.61
COMMD2-201ENST00000463077 AMOTL2Q9Y2J4 779 aa31.34■■■□□ 2.61
COMMD2-201ENST00000463077 PTPRUQ92729 1446 aa31.33■■■□□ 2.61
COMMD2-201ENST00000463077 SHPRHQ149N8 1683 aa31.33■■■□□ 2.61
COMMD2-201ENST00000463077 ROCK1Q13464 1354 aa31.32■■■□□ 2.6
COMMD2-201ENST00000463077 BRINP3Q76B58 766 aa31.32■■■□□ 2.6
COMMD2-201ENST00000463077 UPF1Q92900 1129 aaKnown RBP eCLIP31.32■■■□□ 2.6
COMMD2-201ENST00000463077 MEX3CQ5U5Q3 659 aaKnown RBP31.31■■■□□ 2.6
COMMD2-201ENST00000463077 TRPM2O94759 1503 aa31.3■■■□□ 2.6
COMMD2-201ENST00000463077 IQGAP3Q86VI3 1631 aa31.3■■■□□ 2.6
COMMD2-201ENST00000463077 DCCP43146 1447 aa31.27■■■□□ 2.6
COMMD2-201ENST00000463077 NUP155O75694 1391 aa31.23■■■□□ 2.59
COMMD2-201ENST00000463077 TRIM52Q96A61 297 aa31.23■■■□□ 2.59
COMMD2-201ENST00000463077 RXRBP28702 533 aa31.22■■■□□ 2.59
COMMD2-201ENST00000463077 SETD5Q9C0A6 1442 aa31.21■■■□□ 2.59
COMMD2-201ENST00000463077 NRXN3Q9Y4C0 1643 aa31.2■■■□□ 2.58
COMMD2-201ENST00000463077 XRN1Q8IZH2 1706 aaKnown RBP31.19■■■□□ 2.58
COMMD2-201ENST00000463077 CDK12Q9NYV4 1490 aaPredicted RBP31.19■■■□□ 2.58
COMMD2-201ENST00000463077 SETBP1Q9Y6X0 1596 aa31.18■■■□□ 2.58
COMMD2-201ENST00000463077 MST1RQ04912 1400 aa31.18■■■□□ 2.58
COMMD2-201ENST00000463077 ASXL1Q8IXJ9 1541 aa31.18■■■□□ 2.58
COMMD2-201ENST00000463077 NUTM2BA6NNL0 878 aaPredicted RBP31.16■■■□□ 2.58
COMMD2-201ENST00000463077 NUTM2EB1AL46 878 aaPredicted RBP31.16■■■□□ 2.58
COMMD2-201ENST00000463077 ITGAEP38570 1179 aa31.16■■■□□ 2.58
COMMD2-201ENST00000463077 NUTM2AQ8IVF1 878 aaPredicted RBP31.16■■■□□ 2.58
COMMD2-201ENST00000463077 LRRC59Q96AG4 307 aaKnown RBP31.14■■■□□ 2.58
COMMD2-201ENST00000463077 METP08581 1390 aa31.14■■■□□ 2.58
COMMD2-201ENST00000463077 AFF2P51816 1311 aa31.13■■■□□ 2.57
COMMD2-201ENST00000463077 NHSL1Q5SYE7 1610 aa31.12■■■□□ 2.57
COMMD2-201ENST00000463077 ADGRL3Q9HAR2 1447 aa31.07■■■□□ 2.56
COMMD2-201ENST00000463077 SPHKAPQ2M3C7 1700 aa31.05■■■□□ 2.56
COMMD2-201ENST00000463077 ZNF326Q5BKZ1 582 aaKnown RBP31.05■■■□□ 2.56
COMMD2-201ENST00000463077 PNPLA6Q8IY17 1366 aa31.05■■■□□ 2.56
COMMD2-201ENST00000463077 DDX17Q92841 729 aaKnown RBP31.03■■■□□ 2.56
COMMD2-201ENST00000463077 QTRT2Q9H974 415 aaKnown RBP31.02■■■□□ 2.56
COMMD2-201ENST00000463077 RBM6P78332 1123 aaKnown RBP31.01■■■□□ 2.55
COMMD2-201ENST00000463077 NEXMIFQ5QGS0 1516 aa30.99■■■□□ 2.55
COMMD2-201ENST00000463077 C8orf37Q96NL8 207 aa30.99■■■□□ 2.55
COMMD2-201ENST00000463077 RGS12O14924 1447 aa30.98■■■□□ 2.55
COMMD2-201ENST00000463077 NALCNQ8IZF0 1738 aa30.96■■■□□ 2.55
COMMD2-201ENST00000463077 C1orf167Q5SNV9 1468 aa30.95■■■□□ 2.55
COMMD2-201ENST00000463077 LAMC1P11047 1609 aa30.95■■■□□ 2.54
COMMD2-201ENST00000463077 NAIPQ13075 1403 aa30.94■■■□□ 2.54
COMMD2-201ENST00000463077 CLTCL1P53675 1640 aa30.94■■■□□ 2.54
COMMD2-201ENST00000463077 SOS2Q07890 1332 aaPredicted RBP30.92■■■□□ 2.54
COMMD2-201ENST00000463077 HFM1A2PYH4 1435 aa30.91■■■□□ 2.54
COMMD2-201ENST00000463077 NGLY1Q96IV0 654 aa30.9■■■□□ 2.54
COMMD2-201ENST00000463077 PTCH1Q13635 1447 aa30.9■■■□□ 2.54
COMMD2-201ENST00000463077 ORAI2Q96SN7 254 aa30.88■■■□□ 2.53
COMMD2-201ENST00000463077 PRAG1Q86YV5 1406 aa30.88■■■□□ 2.53
COMMD2-201ENST00000463077 ADAMTS2O95450 1211 aa30.87■■■□□ 2.53
COMMD2-201ENST00000463077 ROBO2Q9HCK4 1378 aa30.87■■■□□ 2.53
COMMD2-201ENST00000463077 VGFO15240 615 aaPredicted RBP30.86■■■□□ 2.53
COMMD2-201ENST00000463077 KIF1BO60333 1816 aa30.84■■■□□ 2.53
COMMD2-201ENST00000463077 FNBP4Q8N3X1 1017 aaPredicted RBP30.83■■■□□ 2.53
COMMD2-201ENST00000463077 USP21Q9UK80 565 aa30.81■■■□□ 2.52
COMMD2-201ENST00000463077 SRCAPQ6ZRS2 3230 aa30.81■■■□□ 2.52
COMMD2-201ENST00000463077 RPGRIP1LQ68CZ1 1315 aa30.79■■■□□ 2.52
COMMD2-201ENST00000463077 TRPC5Q9UL62 973 aaPredicted RBP30.79■■■□□ 2.52
COMMD2-201ENST00000463077 ATAD2Q6PL18 1390 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms