RNA–Protein interactions for RNA: ENST00000463070.1

APP-212, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-212ENST00000463070 TET3O43151 1660 aa13.27□□□□□ -0.29
APP-212ENST00000463070 CADPS2Q86UW7 1296 aa13.26□□□□□ -0.29
APP-212ENST00000463070 UPF1Q92900 1129 aaKnown RBP eCLIP13.26□□□□□ -0.29
APP-212ENST00000463070 CFAP65Q6ZU64 1925 aaKnown RBP13.25□□□□□ -0.29
APP-212ENST00000463070 NOS1P29475 1434 aa13.25□□□□□ -0.29
APP-212ENST00000463070 PLEKHG1Q9ULL1 1385 aa13.25□□□□□ -0.29
APP-212ENST00000463070 APLP2Q06481 763 aa13.25□□□□□ -0.29
APP-212ENST00000463070 NWD1Q149M9 1564 aa13.24□□□□□ -0.29
APP-212ENST00000463070 ATF3P18847 181 aa13.24□□□□□ -0.29
APP-212ENST00000463070 RXRBP28702 533 aa13.24□□□□□ -0.29
APP-212ENST00000463070 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.24□□□□□ -0.29
APP-212ENST00000463070 TBX22Q9Y458 520 aa13.24□□□□□ -0.29
APP-212ENST00000463070 ADGRB3O60242 1522 aa13.23□□□□□ -0.29
APP-212ENST00000463070 DAPK1P53355 1430 aa13.23□□□□□ -0.29
APP-212ENST00000463070 TRIM52Q96A61 297 aa13.23□□□□□ -0.29
APP-212ENST00000463070 C19orf44Q9H6X5 657 aa13.23□□□□□ -0.29
APP-212ENST00000463070 PHLPP1O60346 1717 aa13.22□□□□□ -0.29
APP-212ENST00000463070 CHIC2Q9UKJ5 165 aa13.21□□□□□ -0.29
APP-212ENST00000463070 RPRD2Q5VT52 1461 aaKnown RBP13.21□□□□□ -0.3
APP-212ENST00000463070 RIMS2Q9UQ26 1411 aa13.2□□□□□ -0.3
APP-212ENST00000463070 PIK3R4Q99570 1358 aa13.2□□□□□ -0.3
APP-212ENST00000463070 ZFYVE9O95405 1425 aa13.19□□□□□ -0.3
APP-212ENST00000463070 LRP6O75581 1613 aa13.17□□□□□ -0.3
APP-212ENST00000463070 PTPN23Q9H3S7 1636 aa13.17□□□□□ -0.3
APP-212ENST00000463070 CDK12Q9NYV4 1490 aaPredicted RBP13.17□□□□□ -0.3
APP-212ENST00000463070 CHGAP10645 457 aaKnown RBP13.17□□□□□ -0.3
APP-212ENST00000463070 COL16A1Q07092 1604 aaPredicted RBP13.17□□□□□ -0.3
APP-212ENST00000463070 SETD1AO15047 1707 aaKnown RBP13.16□□□□□ -0.3
APP-212ENST00000463070 NUTM2BA6NNL0 878 aaPredicted RBP13.16□□□□□ -0.3
APP-212ENST00000463070 NUTM2EB1AL46 878 aaPredicted RBP13.16□□□□□ -0.3
APP-212ENST00000463070 NUTM2AQ8IVF1 878 aaPredicted RBP13.16□□□□□ -0.3
APP-212ENST00000463070 CROCC2H7BZ55 1655 aa13.15□□□□□ -0.3
APP-212ENST00000463070 AHDC1Q5TGY3 1603 aaPredicted RBP13.15□□□□□ -0.3
APP-212ENST00000463070 FOXD1Q16676 465 aa13.15□□□□□ -0.3
APP-212ENST00000463070 BRINP3Q76B58 766 aa13.15□□□□□ -0.3
APP-212ENST00000463070 ANKRD50Q9ULJ7 1429 aa13.14□□□□□ -0.31
APP-212ENST00000463070 AFF2P51816 1311 aa13.13□□□□□ -0.31
APP-212ENST00000463070 LRRC59Q96AG4 307 aaKnown RBP13.13□□□□□ -0.31
APP-212ENST00000463070 AMOTL2Q9Y2J4 779 aa13.13□□□□□ -0.31
APP-212ENST00000463070 ADGRL2O95490 1459 aa13.12□□□□□ -0.31
APP-212ENST00000463070 RBM6P78332 1123 aaKnown RBP13.12□□□□□ -0.31
APP-212ENST00000463070 DCCP43146 1447 aa13.12□□□□□ -0.31
APP-212ENST00000463070 ADAMTS13Q76LX8 1427 aa13.12□□□□□ -0.31
APP-212ENST00000463070 DIP2AQ14689 1571 aa13.11□□□□□ -0.31
APP-212ENST00000463070 LOC105371045A0A1W2PR82 267 aa13.11□□□□□ -0.31
APP-212ENST00000463070 SETD5Q9C0A6 1442 aa13.11□□□□□ -0.31
APP-212ENST00000463070 CHD2O14647 1828 aaKnown RBP13.11□□□□□ -0.31
APP-212ENST00000463070 SHPRHQ149N8 1683 aa13.1□□□□□ -0.31
APP-212ENST00000463070 FAM50AQ14320 339 aaKnown RBP13.1□□□□□ -0.31
APP-212ENST00000463070 NUTM2DQ5VT03 806 aaPredicted RBP13.1□□□□□ -0.31
APP-212ENST00000463070 NGLY1Q96IV0 654 aa13.1□□□□□ -0.31
APP-212ENST00000463070 C8orf37Q96NL8 207 aa13.1□□□□□ -0.31
APP-212ENST00000463070 QTRT2Q9H974 415 aaKnown RBP13.1□□□□□ -0.31
APP-212ENST00000463070 TMEM131LA2VDJ0 1609 aa13.08□□□□□ -0.32
APP-212ENST00000463070 TRPM2O94759 1503 aa13.08□□□□□ -0.32
APP-212ENST00000463070 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.07□□□□□ -0.32
APP-212ENST00000463070 ASXL1Q8IXJ9 1541 aa13.06□□□□□ -0.32
APP-212ENST00000463070 ATAD2Q6PL18 1390 aa13.06□□□□□ -0.32
APP-212ENST00000463070 RGS12O14924 1447 aa13.05□□□□□ -0.32
APP-212ENST00000463070 MST1RQ04912 1400 aa13.05□□□□□ -0.32
APP-212ENST00000463070 ZRANB1Q9UGI0 708 aa13.04□□□□□ -0.32
APP-212ENST00000463070 GCC2Q8IWJ2 1684 aa13.04□□□□□ -0.32
APP-212ENST00000463070 PTPRUQ92729 1446 aa13.04□□□□□ -0.32
APP-212ENST00000463070 PNPLA6Q8IY17 1366 aa13.03□□□□□ -0.32
APP-212ENST00000463070 ADAMTS2O95450 1211 aa13.02□□□□□ -0.33
APP-212ENST00000463070 ZNF326Q5BKZ1 582 aaKnown RBP13.02□□□□□ -0.33
APP-212ENST00000463070 TRPC5Q9UL62 973 aaPredicted RBP13.02□□□□□ -0.33
APP-212ENST00000463070 CCDC125Q86Z20 511 aa13.01□□□□□ -0.33
APP-212ENST00000463070 USP21Q9UK80 565 aa13.01□□□□□ -0.33
APP-212ENST00000463070 NUP155O75694 1391 aa13.01□□□□□ -0.33
APP-212ENST00000463070 ADGRL3Q9HAR2 1447 aa13□□□□□ -0.33
APP-212ENST00000463070 ROCK1Q13464 1354 aa13□□□□□ -0.33
APP-212ENST00000463070 DDX17Q92841 729 aaKnown RBP12.99□□□□□ -0.33
APP-212ENST00000463070 METP08581 1390 aa12.98□□□□□ -0.33
APP-212ENST00000463070 MYO5BQ9ULV0 1848 aa12.98□□□□□ -0.33
APP-212ENST00000463070 FNBP4Q8N3X1 1017 aaPredicted RBP12.98□□□□□ -0.33
APP-212ENST00000463070 UNC13BO14795 1591 aa12.98□□□□□ -0.33
APP-212ENST00000463070 SETBP1Q9Y6X0 1596 aa12.98□□□□□ -0.33
APP-212ENST00000463070 SRCAPQ6ZRS2 3230 aa12.98□□□□□ -0.33
APP-212ENST00000463070 PTCH1Q13635 1447 aa12.96□□□□□ -0.33
APP-212ENST00000463070 NHSL1Q5SYE7 1610 aa12.96□□□□□ -0.33
APP-212ENST00000463070 SOS2Q07890 1332 aaPredicted RBP12.96□□□□□ -0.33
APP-212ENST00000463070 C1orf167Q5SNV9 1468 aa12.96□□□□□ -0.34
APP-212ENST00000463070 XRN1Q8IZH2 1706 aaKnown RBP12.95□□□□□ -0.34
APP-212ENST00000463070 E9PCH4 1651 aa12.94□□□□□ -0.34
APP-212ENST00000463070 IQGAP3Q86VI3 1631 aa12.93□□□□□ -0.34
APP-212ENST00000463070 VGFO15240 615 aaPredicted RBP12.92□□□□□ -0.34
APP-212ENST00000463070 ATRNO75882 1429 aa12.92□□□□□ -0.34
APP-212ENST00000463070 ORAI2Q96SN7 254 aa12.92□□□□□ -0.34
APP-212ENST00000463070 NRXN3Q9Y4C0 1643 aa12.91□□□□□ -0.34
APP-212ENST00000463070 NPHP3Q7Z494 1330 aa12.9□□□□□ -0.34
APP-212ENST00000463070 GJD4Q96KN9 370 aaPredicted RBP12.89□□□□□ -0.35
APP-212ENST00000463070 HFM1A2PYH4 1435 aa12.88□□□□□ -0.35
APP-212ENST00000463070 LRPPRCP42704 1394 aaKnown RBP12.88□□□□□ -0.35
APP-212ENST00000463070 ROBO2Q9HCK4 1378 aa12.87□□□□□ -0.35
APP-212ENST00000463070 ITGAEP38570 1179 aa12.87□□□□□ -0.35
APP-212ENST00000463070 SF3B2Q13435 895 aaKnown RBP12.87□□□□□ -0.35
APP-212ENST00000463070 ESCO1Q5FWF5 840 aa12.87□□□□□ -0.35
APP-212ENST00000463070 LAMC1P11047 1609 aa12.87□□□□□ -0.35
APP-212ENST00000463070 RPGRIP1LQ68CZ1 1315 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms