RNA–Protein interactions for RNA: ENST00000462625.1

LIMK2-206, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 1,042 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-206ENST00000462625 TRPM2O94759 1503 aa34.5■■■■□ 3.11
LIMK2-206ENST00000462625 PPP1R15AO75807 674 aaPredicted RBP34.5■■■■□ 3.11
LIMK2-206ENST00000462625 BCANQ96GW7 911 aa34.49■■■■□ 3.11
LIMK2-206ENST00000462625 KIF1BO60333 1816 aa34.48■■■■□ 3.11
LIMK2-206ENST00000462625 ZFYVE9O95405 1425 aa34.48■■■■□ 3.11
LIMK2-206ENST00000462625 CLTCL1P53675 1640 aa34.44■■■■□ 3.1
LIMK2-206ENST00000462625 MPHOSPH9Q99550 1183 aa34.43■■■■□ 3.1
LIMK2-206ENST00000462625 PLEKHG1Q9ULL1 1385 aa34.42■■■■□ 3.1
LIMK2-206ENST00000462625 ZNF326Q5BKZ1 582 aaKnown RBP34.41■■■■□ 3.1
LIMK2-206ENST00000462625 STRCP1A6NGW2 1772 aa34.41■■■■□ 3.1
LIMK2-206ENST00000462625 RAB3GAP2Q9H2M9 1393 aa34.4■■■■□ 3.1
LIMK2-206ENST00000462625 SLC26A8Q96RN1 970 aa34.39■■■■□ 3.1
LIMK2-206ENST00000462625 NUTM2DQ5VT03 806 aaPredicted RBP34.34■■■■□ 3.09
LIMK2-206ENST00000462625 FOXD1Q16676 465 aa34.33■■■■□ 3.09
LIMK2-206ENST00000462625 SENP3Q9H4L4 574 aaPredicted RBP34.32■■■■□ 3.08
LIMK2-206ENST00000462625 UBAP1LF5GYI3 381 aa34.31■■■■□ 3.08
LIMK2-206ENST00000462625 KCNA6P17658 529 aa34.29■■■■□ 3.08
LIMK2-206ENST00000462625 LRRC7Q96NW7 1537 aa34.29■■■■□ 3.08
LIMK2-206ENST00000462625 HRCP23327 699 aa34.28■■■■□ 3.08
LIMK2-206ENST00000462625 TBX22Q9Y458 520 aa34.27■■■■□ 3.08
LIMK2-206ENST00000462625 CCDC144AA2RUR9 1427 aa34.27■■■■□ 3.08
LIMK2-206ENST00000462625 DIP2AQ14689 1571 aa34.27■■■■□ 3.08
LIMK2-206ENST00000462625 TOM1O60784 492 aa34.24■■■■□ 3.07
LIMK2-206ENST00000462625 CHD2O14647 1828 aaKnown RBP34.24■■■■□ 3.07
LIMK2-206ENST00000462625 NEXMIFQ5QGS0 1516 aa34.23■■■■□ 3.07
LIMK2-206ENST00000462625 RPGRIP1LQ68CZ1 1315 aa34.21■■■■□ 3.07
LIMK2-206ENST00000462625 NWD1Q149M9 1564 aa34.2■■■■□ 3.07
LIMK2-206ENST00000462625 ADAMTS13Q76LX8 1427 aa34.2■■■■□ 3.06
LIMK2-206ENST00000462625 VGFO15240 615 aaPredicted RBP34.18■■■■□ 3.06
LIMK2-206ENST00000462625 NKTRP30414 1462 aaKnown RBP34.18■■■■□ 3.06
LIMK2-206ENST00000462625 XIRP1Q702N8 1843 aaKnown RBP34.17■■■■□ 3.06
LIMK2-206ENST00000462625 PROSER2Q86WR7 435 aaPredicted RBP34.17■■■■□ 3.06
LIMK2-206ENST00000462625 PIK3R4Q99570 1358 aa34.17■■■■□ 3.06
LIMK2-206ENST00000462625 SETBP1Q9Y6X0 1596 aa34.17■■■■□ 3.06
LIMK2-206ENST00000462625 PPLO60437 1756 aa34.14■■■■□ 3.06
LIMK2-206ENST00000462625 NRXN3Q9Y4C0 1643 aa34.12■■■■□ 3.05
LIMK2-206ENST00000462625 SCAF1Q9H7N4 1312 aaKnown RBP34.11■■■■□ 3.05
LIMK2-206ENST00000462625 TMEM94Q12767 1356 aa34.11■■■■□ 3.05
LIMK2-206ENST00000462625 PIP4K2BP78356 416 aa34.08■■■■□ 3.05
LIMK2-206ENST00000462625 RGL3Q3MIN7 710 aa34.08■■■■□ 3.05
LIMK2-206ENST00000462625 SPATA31E1Q6ZUB1 1445 aa34.05■■■■□ 3.04
LIMK2-206ENST00000462625 AMOTL2Q9Y2J4 779 aa34.04■■■■□ 3.04
LIMK2-206ENST00000462625 IFT172Q9UG01 1749 aa34.01■■■■□ 3.04
LIMK2-206ENST00000462625 ANKRD30BQ9BXX2 1392 aa34.01■■■■□ 3.04
LIMK2-206ENST00000462625 RBM33Q96EV2 1170 aaKnown RBP34.01■■■■□ 3.03
LIMK2-206ENST00000462625 MSH6P52701 1360 aa33.99■■■■□ 3.03
LIMK2-206ENST00000462625 ALKQ9UM73 1620 aa33.99■■■■□ 3.03
LIMK2-206ENST00000462625 NCOA3Q9Y6Q9 1424 aa33.98■■■■□ 3.03
LIMK2-206ENST00000462625 PTPRUQ92729 1446 aa33.97■■■■□ 3.03
LIMK2-206ENST00000462625 METP08581 1390 aa33.97■■■■□ 3.03
LIMK2-206ENST00000462625 C14orf37Q86TY3 774 aa33.96■■■■□ 3.03
LIMK2-206ENST00000462625 XRN1Q8IZH2 1706 aaKnown RBP33.96■■■■□ 3.03
LIMK2-206ENST00000462625 SETD1AO15047 1707 aaKnown RBP33.93■■■■□ 3.02
LIMK2-206ENST00000462625 ADGRF5Q8IZF2 1346 aa33.91■■■■□ 3.02
LIMK2-206ENST00000462625 C19orf44Q9H6X5 657 aa33.86■■■■□ 3.01
LIMK2-206ENST00000462625 HSPA1LP34931 641 aa33.85■■■■□ 3.01
LIMK2-206ENST00000462625 TRIM26Q12899 539 aaPredicted RBP33.85■■■■□ 3.01
LIMK2-206ENST00000462625 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.84■■■■□ 3.01
LIMK2-206ENST00000462625 MYOM2P54296 1465 aa33.82■■■■□ 3
LIMK2-206ENST00000462625 PIK3C2GO75747 1445 aa33.81■■■■□ 3
LIMK2-206ENST00000462625 ATF3P18847 181 aa33.81■■■■□ 3
LIMK2-206ENST00000462625 CADPS2Q86UW7 1296 aa33.81■■■■□ 3
LIMK2-206ENST00000462625 FAM135BQ49AJ0 1406 aa33.8■■■■□ 3
LIMK2-206ENST00000462625 SLAIN2Q9P270 581 aa33.8■■■■□ 3
LIMK2-206ENST00000462625 PTCH1Q13635 1447 aa33.77■■■■□ 3
LIMK2-206ENST00000462625 ROBO1Q9Y6N7 1651 aa33.77■■■■□ 3
LIMK2-206ENST00000462625 STAC3Q96MF2 364 aa33.76■■■□□ 2.99
LIMK2-206ENST00000462625 LAMC1P11047 1609 aa33.75■■■□□ 2.99
LIMK2-206ENST00000462625 DCCP43146 1447 aa33.74■■■□□ 2.99
LIMK2-206ENST00000462625 NRXN1Q9ULB1 1477 aa33.74■■■□□ 2.99
LIMK2-206ENST00000462625 PRAG1Q86YV5 1406 aa33.73■■■□□ 2.99
LIMK2-206ENST00000462625 DCAF11Q8TEB1 546 aa33.73■■■□□ 2.99
LIMK2-206ENST00000462625 C14orf93Q9H972 538 aaKnown RBP33.71■■■□□ 2.99
LIMK2-206ENST00000462625 ADGRL3Q9HAR2 1447 aa33.7■■■□□ 2.99
LIMK2-206ENST00000462625 KDM2AQ9Y2K7 1162 aa33.7■■■□□ 2.99
LIMK2-206ENST00000462625 ROBO2Q9HCK4 1378 aa33.7■■■□□ 2.98
LIMK2-206ENST00000462625 NALCNQ8IZF0 1738 aa33.7■■■□□ 2.98
LIMK2-206ENST00000462625 STK26Q9P289 416 aa33.68■■■□□ 2.98
LIMK2-206ENST00000462625 TMEM132EQ6IEE7 984 aa33.67■■■□□ 2.98
LIMK2-206ENST00000462625 LRPPRCP42704 1394 aaKnown RBP33.67■■■□□ 2.98
LIMK2-206ENST00000462625 KNDC1Q76NI1 1749 aa33.66■■■□□ 2.98
LIMK2-206ENST00000462625 CFAP70Q5T0N1 1121 aa33.65■■■□□ 2.98
LIMK2-206ENST00000462625 DHX57Q6P158 1386 aaKnown RBP33.64■■■□□ 2.98
LIMK2-206ENST00000462625 ABCC11Q96J66 1382 aa33.64■■■□□ 2.98
LIMK2-206ENST00000462625 ASXL1Q8IXJ9 1541 aa33.63■■■□□ 2.97
LIMK2-206ENST00000462625 TECPR2O15040 1411 aa33.62■■■□□ 2.97
LIMK2-206ENST00000462625 YTHDC2Q9H6S0 1430 aaKnown RBP33.62■■■□□ 2.97
LIMK2-206ENST00000462625 PHLPP1O60346 1717 aa33.59■■■□□ 2.97
LIMK2-206ENST00000462625 MST1RQ04912 1400 aa33.56■■■□□ 2.96
LIMK2-206ENST00000462625 DISP3Q9P2K9 1392 aa33.56■■■□□ 2.96
LIMK2-206ENST00000462625 SIRT1Q96EB6 747 aa33.55■■■□□ 2.96
LIMK2-206ENST00000462625 WAPLQ7Z5K2 1190 aa33.53■■■□□ 2.96
LIMK2-206ENST00000462625 BRINP3Q76B58 766 aa33.51■■■□□ 2.95
LIMK2-206ENST00000462625 CDC42BPGQ6DT37 1551 aa33.48■■■□□ 2.95
LIMK2-206ENST00000462625 AHDC1Q5TGY3 1603 aaPredicted RBP33.48■■■□□ 2.95
LIMK2-206ENST00000462625 ADGRB1O14514 1584 aa33.47■■■□□ 2.95
LIMK2-206ENST00000462625 NEUROD1Q13562 356 aa33.46■■■□□ 2.95
LIMK2-206ENST00000462625 SIN3AQ96ST3 1273 aa33.46■■■□□ 2.95
LIMK2-206ENST00000462625 DLC1Q96QB1 1528 aa33.46■■■□□ 2.95
LIMK2-206ENST00000462625 MED1Q15648 1581 aaPredicted RBP33.46■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms