RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 NWD1Q149M9 1564 aa18.28■□□□□ 0.52
PCCB-203ENST00000462542 PHLPP1O60346 1717 aa18.28■□□□□ 0.52
PCCB-203ENST00000462542 SPATA31A6Q5VVP1 1343 aa18.27■□□□□ 0.52
PCCB-203ENST00000462542 APLP2Q06481 763 aa18.27■□□□□ 0.52
PCCB-203ENST00000462542 CHIC2Q9UKJ5 165 aa18.27■□□□□ 0.52
PCCB-203ENST00000462542 CROCC2H7BZ55 1655 aa18.27■□□□□ 0.52
PCCB-203ENST00000462542 ADGRB3O60242 1522 aa18.26■□□□□ 0.51
PCCB-203ENST00000462542 PTPN23Q9H3S7 1636 aa18.26■□□□□ 0.51
PCCB-203ENST00000462542 PLEKHG1Q9ULL1 1385 aa18.25■□□□□ 0.51
PCCB-203ENST00000462542 PPP1R15AO75807 674 aaPredicted RBP18.24■□□□□ 0.51
PCCB-203ENST00000462542 MEX3CQ5U5Q3 659 aaKnown RBP18.24■□□□□ 0.51
PCCB-203ENST00000462542 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.24■□□□□ 0.51
PCCB-203ENST00000462542 FGD6Q6ZV73 1430 aa18.23■□□□□ 0.51
PCCB-203ENST00000462542 LOC105371045A0A1W2PR82 267 aa18.23■□□□□ 0.51
PCCB-203ENST00000462542 CADPS2Q86UW7 1296 aa18.23■□□□□ 0.51
PCCB-203ENST00000462542 UPF1Q92900 1129 aaKnown RBP eCLIP18.23■□□□□ 0.51
PCCB-203ENST00000462542 C19orf44Q9H6X5 657 aa18.23■□□□□ 0.51
PCCB-203ENST00000462542 CHD2O14647 1828 aaKnown RBP18.23■□□□□ 0.51
PCCB-203ENST00000462542 RPRD2Q5VT52 1461 aaKnown RBP18.22■□□□□ 0.51
PCCB-203ENST00000462542 C14orf37Q86TY3 774 aa18.22■□□□□ 0.51
PCCB-203ENST00000462542 ATF3P18847 181 aa18.21■□□□□ 0.51
PCCB-203ENST00000462542 ZFYVE9O95405 1425 aa18.21■□□□□ 0.51
PCCB-203ENST00000462542 RIMS2Q9UQ26 1411 aa18.2■□□□□ 0.5
PCCB-203ENST00000462542 RXRBP28702 533 aa18.19■□□□□ 0.5
PCCB-203ENST00000462542 COL16A1Q07092 1604 aaPredicted RBP18.19■□□□□ 0.5
PCCB-203ENST00000462542 SETD1AO15047 1707 aaKnown RBP18.18■□□□□ 0.5
PCCB-203ENST00000462542 TRIM52Q96A61 297 aa18.17■□□□□ 0.5
PCCB-203ENST00000462542 PIK3R4Q99570 1358 aa18.17■□□□□ 0.5
PCCB-203ENST00000462542 LRP6O75581 1613 aa18.15■□□□□ 0.5
PCCB-203ENST00000462542 ADGRL2O95490 1459 aa18.14■□□□□ 0.5
PCCB-203ENST00000462542 ANKRD50Q9ULJ7 1429 aa18.14■□□□□ 0.49
PCCB-203ENST00000462542 TMEM131LA2VDJ0 1609 aa18.13■□□□□ 0.49
PCCB-203ENST00000462542 AHDC1Q5TGY3 1603 aaPredicted RBP18.13■□□□□ 0.49
PCCB-203ENST00000462542 CHGAP10645 457 aaKnown RBP18.13■□□□□ 0.49
PCCB-203ENST00000462542 SHPRHQ149N8 1683 aa18.12■□□□□ 0.49
PCCB-203ENST00000462542 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.12■□□□□ 0.49
PCCB-203ENST00000462542 MYO5BQ9ULV0 1848 aa18.12■□□□□ 0.49
PCCB-203ENST00000462542 BRINP3Q76B58 766 aa18.11■□□□□ 0.49
PCCB-203ENST00000462542 AMOTL2Q9Y2J4 779 aa18.11■□□□□ 0.49
PCCB-203ENST00000462542 CDK12Q9NYV4 1490 aaPredicted RBP18.11■□□□□ 0.49
PCCB-203ENST00000462542 ADAMTS13Q76LX8 1427 aa18.1■□□□□ 0.49
PCCB-203ENST00000462542 GCC2Q8IWJ2 1684 aa18.09■□□□□ 0.49
PCCB-203ENST00000462542 DIP2AQ14689 1571 aa18.09■□□□□ 0.49
PCCB-203ENST00000462542 NUTM2BA6NNL0 878 aaPredicted RBP18.09■□□□□ 0.49
PCCB-203ENST00000462542 NUTM2EB1AL46 878 aaPredicted RBP18.09■□□□□ 0.49
PCCB-203ENST00000462542 NUTM2AQ8IVF1 878 aaPredicted RBP18.09■□□□□ 0.49
PCCB-203ENST00000462542 FAM50AQ14320 339 aaKnown RBP18.08■□□□□ 0.48
PCCB-203ENST00000462542 NUTM2DQ5VT03 806 aaPredicted RBP18.08■□□□□ 0.48
PCCB-203ENST00000462542 LRRC59Q96AG4 307 aaKnown RBP18.08■□□□□ 0.48
PCCB-203ENST00000462542 AFF2P51816 1311 aa18.07■□□□□ 0.48
PCCB-203ENST00000462542 DCCP43146 1447 aa18.06■□□□□ 0.48
PCCB-203ENST00000462542 QTRT2Q9H974 415 aaKnown RBP18.05■□□□□ 0.48
PCCB-203ENST00000462542 SETD5Q9C0A6 1442 aa18.05■□□□□ 0.48
PCCB-203ENST00000462542 TRPM2O94759 1503 aa18.04■□□□□ 0.48
PCCB-203ENST00000462542 RBM6P78332 1123 aaKnown RBP18.04■□□□□ 0.48
PCCB-203ENST00000462542 PTPRUQ92729 1446 aa18.01■□□□□ 0.47
PCCB-203ENST00000462542 NGLY1Q96IV0 654 aa17.99■□□□□ 0.47
PCCB-203ENST00000462542 C8orf37Q96NL8 207 aa17.99■□□□□ 0.47
PCCB-203ENST00000462542 ASXL1Q8IXJ9 1541 aa17.98■□□□□ 0.47
PCCB-203ENST00000462542 FOXD1Q16676 465 aa17.98■□□□□ 0.47
PCCB-203ENST00000462542 UNC13BO14795 1591 aa17.98■□□□□ 0.47
PCCB-203ENST00000462542 E9PCH4 1651 aa17.98■□□□□ 0.47
PCCB-203ENST00000462542 MST1RQ04912 1400 aa17.98■□□□□ 0.47
PCCB-203ENST00000462542 SRCAPQ6ZRS2 3230 aa17.95■□□□□ 0.46
PCCB-203ENST00000462542 NUP155O75694 1391 aa17.95■□□□□ 0.46
PCCB-203ENST00000462542 ROCK1Q13464 1354 aa17.95■□□□□ 0.46
PCCB-203ENST00000462542 NHSL1Q5SYE7 1610 aa17.94■□□□□ 0.46
PCCB-203ENST00000462542 PNPLA6Q8IY17 1366 aa17.93■□□□□ 0.46
PCCB-203ENST00000462542 RGS12O14924 1447 aa17.93■□□□□ 0.46
PCCB-203ENST00000462542 ZNF326Q5BKZ1 582 aaKnown RBP17.93■□□□□ 0.46
PCCB-203ENST00000462542 IQGAP3Q86VI3 1631 aa17.93■□□□□ 0.46
PCCB-203ENST00000462542 XRN1Q8IZH2 1706 aaKnown RBP17.92■□□□□ 0.46
PCCB-203ENST00000462542 METP08581 1390 aa17.91■□□□□ 0.46
PCCB-203ENST00000462542 SETBP1Q9Y6X0 1596 aa17.91■□□□□ 0.46
PCCB-203ENST00000462542 DDX17Q92841 729 aaKnown RBP17.91■□□□□ 0.46
PCCB-203ENST00000462542 ATAD2Q6PL18 1390 aa17.91■□□□□ 0.46
PCCB-203ENST00000462542 ADGRL3Q9HAR2 1447 aa17.9■□□□□ 0.46
PCCB-203ENST00000462542 ADAMTS2O95450 1211 aa17.9■□□□□ 0.46
PCCB-203ENST00000462542 USP21Q9UK80 565 aa17.89■□□□□ 0.45
PCCB-203ENST00000462542 TRPC5Q9UL62 973 aaPredicted RBP17.89■□□□□ 0.45
PCCB-203ENST00000462542 NRXN3Q9Y4C0 1643 aa17.89■□□□□ 0.45
PCCB-203ENST00000462542 CCDC125Q86Z20 511 aa17.88■□□□□ 0.45
PCCB-203ENST00000462542 FNBP4Q8N3X1 1017 aaPredicted RBP17.88■□□□□ 0.45
PCCB-203ENST00000462542 ZRANB1Q9UGI0 708 aa17.88■□□□□ 0.45
PCCB-203ENST00000462542 SOS2Q07890 1332 aaPredicted RBP17.86■□□□□ 0.45
PCCB-203ENST00000462542 C1orf167Q5SNV9 1468 aa17.86■□□□□ 0.45
PCCB-203ENST00000462542 PTCH1Q13635 1447 aa17.83■□□□□ 0.45
PCCB-203ENST00000462542 VGFO15240 615 aaPredicted RBP17.82■□□□□ 0.44
PCCB-203ENST00000462542 ORAI2Q96SN7 254 aa17.82■□□□□ 0.44
PCCB-203ENST00000462542 LAMC1P11047 1609 aa17.82■□□□□ 0.44
PCCB-203ENST00000462542 SPHKAPQ2M3C7 1700 aa17.81■□□□□ 0.44
PCCB-203ENST00000462542 NALCNQ8IZF0 1738 aa17.8■□□□□ 0.44
PCCB-203ENST00000462542 ITGAEP38570 1179 aa17.79■□□□□ 0.44
PCCB-203ENST00000462542 ATRNO75882 1429 aa17.79■□□□□ 0.44
PCCB-203ENST00000462542 NEXMIFQ5QGS0 1516 aa17.77■□□□□ 0.44
PCCB-203ENST00000462542 EP400Q96L91 3159 aa17.77■□□□□ 0.43
PCCB-203ENST00000462542 NPHP3Q7Z494 1330 aa17.76■□□□□ 0.43
PCCB-203ENST00000462542 RPGRIP1LQ68CZ1 1315 aa17.75■□□□□ 0.43
PCCB-203ENST00000462542 GJD4Q96KN9 370 aaPredicted RBP17.75■□□□□ 0.43
PCCB-203ENST00000462542 ROBO2Q9HCK4 1378 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms