RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 MYOM2P54296 1465 aa19.36■□□□□ 0.69
PBRM1-219ENST00000462207 SETD1BQ9UPS6 1966 aaKnown RBP19.36■□□□□ 0.69
PBRM1-219ENST00000462207 NBPF8Q3BBV2 869 aa19.36■□□□□ 0.69
PBRM1-219ENST00000462207 ZFYVE9O95405 1425 aa19.35■□□□□ 0.69
PBRM1-219ENST00000462207 RIMS2Q9UQ26 1411 aa19.35■□□□□ 0.69
PBRM1-219ENST00000462207 PRAG1Q86YV5 1406 aa19.35■□□□□ 0.69
PBRM1-219ENST00000462207 ADGRF5Q8IZF2 1346 aa19.34■□□□□ 0.69
PBRM1-219ENST00000462207 TMEM2Q9UHN6 1383 aa19.34■□□□□ 0.69
PBRM1-219ENST00000462207 RPGRIP1LQ68CZ1 1315 aa19.34■□□□□ 0.69
PBRM1-219ENST00000462207 ARHGAP23Q9P227 1491 aa19.32■□□□□ 0.68
PBRM1-219ENST00000462207 SENP3Q9H4L4 574 aaPredicted RBP19.32■□□□□ 0.68
PBRM1-219ENST00000462207 NRXN1Q9ULB1 1477 aa19.32■□□□□ 0.68
PBRM1-219ENST00000462207 SLIT1O75093 1534 aa19.32■□□□□ 0.68
PBRM1-219ENST00000462207 THEMISQ8N1K5 641 aaPredicted RBP19.3■□□□□ 0.68
PBRM1-219ENST00000462207 TRPM1Q7Z4N2 1603 aa19.29■□□□□ 0.68
PBRM1-219ENST00000462207 PIK3C2GO75747 1445 aa19.28■□□□□ 0.68
PBRM1-219ENST00000462207 LMTK3Q96Q04 1460 aa19.28■□□□□ 0.68
PBRM1-219ENST00000462207 LTKP29376 864 aa19.28■□□□□ 0.68
PBRM1-219ENST00000462207 VGFO15240 615 aaPredicted RBP19.27■□□□□ 0.67
PBRM1-219ENST00000462207 RALGAPBQ86X10 1494 aa19.26■□□□□ 0.67
PBRM1-219ENST00000462207 STAC3Q96MF2 364 aa19.25■□□□□ 0.67
PBRM1-219ENST00000462207 NRXN3Q9Y4C0 1643 aa19.24■□□□□ 0.67
PBRM1-219ENST00000462207 SCAF11Q99590 1463 aaKnown RBP19.24■□□□□ 0.67
PBRM1-219ENST00000462207 TXNDC2Q86VQ3 553 aa19.24■□□□□ 0.67
PBRM1-219ENST00000462207 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.24■□□□□ 0.67
PBRM1-219ENST00000462207 IQGAP1P46940 1657 aa19.24■□□□□ 0.67
PBRM1-219ENST00000462207 HSPA2P54652 639 aa19.23■□□□□ 0.67
PBRM1-219ENST00000462207 CFAP70Q5T0N1 1121 aa19.23■□□□□ 0.67
PBRM1-219ENST00000462207 NBPF1Q3BBV0 1214 aa19.22■□□□□ 0.67
PBRM1-219ENST00000462207 EID1Q9Y6B2 187 aa19.22■□□□□ 0.67
PBRM1-219ENST00000462207 SETBP1Q9Y6X0 1596 aa19.21■□□□□ 0.67
PBRM1-219ENST00000462207 KIAA1210Q9ULL0 1709 aa19.21■□□□□ 0.66
PBRM1-219ENST00000462207 ROCK2O75116 1388 aaKnown RBP19.21■□□□□ 0.66
PBRM1-219ENST00000462207 PLEKHG1Q9ULL1 1385 aa19.21■□□□□ 0.66
PBRM1-219ENST00000462207 HDGFP51858 240 aaKnown RBP19.2■□□□□ 0.66
PBRM1-219ENST00000462207 POLR1AO95602 1720 aaPredicted RBP19.2■□□□□ 0.66
PBRM1-219ENST00000462207 ALKQ9UM73 1620 aa19.2■□□□□ 0.66
PBRM1-219ENST00000462207 ASXL1Q8IXJ9 1541 aa19.19■□□□□ 0.66
PBRM1-219ENST00000462207 LAMC1P11047 1609 aa19.19■□□□□ 0.66
PBRM1-219ENST00000462207 SETD1AO15047 1707 aaKnown RBP19.19■□□□□ 0.66
PBRM1-219ENST00000462207 ANKLE2Q86XL3 938 aa19.18■□□□□ 0.66
PBRM1-219ENST00000462207 NCKAP5LQ9HCH0 1330 aa19.18■□□□□ 0.66
PBRM1-219ENST00000462207 C14orf93Q9H972 538 aaKnown RBP19.17■□□□□ 0.66
PBRM1-219ENST00000462207 ADGRB1O14514 1584 aa19.17■□□□□ 0.66
PBRM1-219ENST00000462207 ADAMTS13Q76LX8 1427 aa19.17■□□□□ 0.66
PBRM1-219ENST00000462207 BCANQ96GW7 911 aa19.17■□□□□ 0.66
PBRM1-219ENST00000462207 GPRASP1Q5JY77 1395 aa19.16■□□□□ 0.66
PBRM1-219ENST00000462207 TMEM132EQ6IEE7 984 aa19.15■□□□□ 0.66
PBRM1-219ENST00000462207 CARD11Q9BXL7 1154 aa19.15■□□□□ 0.66
PBRM1-219ENST00000462207 NPHP4O75161 1426 aaPredicted RBP19.14■□□□□ 0.65
PBRM1-219ENST00000462207 SLC26A8Q96RN1 970 aa19.13■□□□□ 0.65
PBRM1-219ENST00000462207 MED14O60244 1454 aa19.13■□□□□ 0.65
PBRM1-219ENST00000462207 METP08581 1390 aa19.12■□□□□ 0.65
PBRM1-219ENST00000462207 STRCQ7RTU9 1775 aa19.11■□□□□ 0.65
PBRM1-219ENST00000462207 USP47Q96K76 1375 aa19.1■□□□□ 0.65
PBRM1-219ENST00000462207 DIP2AQ14689 1571 aa19.1■□□□□ 0.65
PBRM1-219ENST00000462207 HIRIP3Q9BW71 556 aaPredicted RBP19.09■□□□□ 0.65
PBRM1-219ENST00000462207 YTHDC2Q9H6S0 1430 aaKnown RBP19.07■□□□□ 0.64
PBRM1-219ENST00000462207 HSPA5P11021 654 aaKnown RBP19.07■□□□□ 0.64
PBRM1-219ENST00000462207 STK26Q9P289 416 aa19.06■□□□□ 0.64
PBRM1-219ENST00000462207 TRAK1Q9UPV9 953 aa19.06■□□□□ 0.64
PBRM1-219ENST00000462207 TBX22Q9Y458 520 aa19.06■□□□□ 0.64
PBRM1-219ENST00000462207 PTPRUQ92729 1446 aa19.05■□□□□ 0.64
PBRM1-219ENST00000462207 EIF4G2P78344 907 aaKnown RBP eCLIP19.05■□□□□ 0.64
PBRM1-219ENST00000462207 ARHGEF28Q8N1W1 1705 aaKnown RBP19.04■□□□□ 0.64
PBRM1-219ENST00000462207 LRPPRCP42704 1394 aaKnown RBP19.03■□□□□ 0.64
PBRM1-219ENST00000462207 AEBP2Q6ZN18 517 aaPredicted RBP19.02■□□□□ 0.64
PBRM1-219ENST00000462207 KNDC1Q76NI1 1749 aa19.01■□□□□ 0.63
PBRM1-219ENST00000462207 XRN1Q8IZH2 1706 aaKnown RBP19.01■□□□□ 0.63
PBRM1-219ENST00000462207 ST20-MTHFSA0A0A6YYL1 179 aa19.01■□□□□ 0.63
PBRM1-219ENST00000462207 CPS1P31327 1500 aa18.99■□□□□ 0.63
PBRM1-219ENST00000462207 EIF3AQ14152 1382 aaKnown RBP18.99■□□□□ 0.63
PBRM1-219ENST00000462207 ABCC11Q96J66 1382 aa18.98■□□□□ 0.63
PBRM1-219ENST00000462207 DLC1Q96QB1 1528 aa18.98■□□□□ 0.63
PBRM1-219ENST00000462207 TECPR2O15040 1411 aa18.98■□□□□ 0.63
PBRM1-219ENST00000462207 PIK3R4Q99570 1358 aa18.98■□□□□ 0.63
PBRM1-219ENST00000462207 AMOTL2Q9Y2J4 779 aa18.98■□□□□ 0.63
PBRM1-219ENST00000462207 CHD2O14647 1828 aaKnown RBP18.97■□□□□ 0.63
PBRM1-219ENST00000462207 QRICH2Q9H0J4 1663 aa18.97■□□□□ 0.63
PBRM1-219ENST00000462207 ROBO2Q9HCK4 1378 aa18.97■□□□□ 0.63
PBRM1-219ENST00000462207 PLEKHH1Q9ULM0 1364 aa18.97■□□□□ 0.63
PBRM1-219ENST00000462207 NWD1Q149M9 1564 aa18.96■□□□□ 0.63
PBRM1-219ENST00000462207 SAFB2Q14151 953 aaKnown RBP eCLIP18.96■□□□□ 0.63
PBRM1-219ENST00000462207 PRAM1Q96QH2 718 aa18.96■□□□□ 0.63
PBRM1-219ENST00000462207 CENPJQ9HC77 1338 aaPredicted RBP18.95■□□□□ 0.62
PBRM1-219ENST00000462207 KCNA6P17658 529 aa18.95■□□□□ 0.62
PBRM1-219ENST00000462207 WAPLQ7Z5K2 1190 aa18.94■□□□□ 0.62
PBRM1-219ENST00000462207 TESK2Q96S53 571 aa18.94■□□□□ 0.62
PBRM1-219ENST00000462207 ZNF316A6NFI3 1004 aaPredicted RBP18.94■□□□□ 0.62
PBRM1-219ENST00000462207 PTCH1Q13635 1447 aa18.93■□□□□ 0.62
PBRM1-219ENST00000462207 STRCP1A6NGW2 1772 aa18.93■□□□□ 0.62
PBRM1-219ENST00000462207 FAM135BQ49AJ0 1406 aa18.92■□□□□ 0.62
PBRM1-219ENST00000462207 POGKQ9P215 609 aa18.92■□□□□ 0.62
PBRM1-219ENST00000462207 C11orf95C9JLR9 678 aaPredicted RBP18.91■□□□□ 0.62
PBRM1-219ENST00000462207 DISP3Q9P2K9 1392 aa18.9■□□□□ 0.62
PBRM1-219ENST00000462207 MINK1Q8N4C8 1332 aaPredicted RBP18.89■□□□□ 0.61
PBRM1-219ENST00000462207 ZNF335Q9H4Z2 1342 aaPredicted RBP18.88■□□□□ 0.61
PBRM1-219ENST00000462207 RBM33Q96EV2 1170 aaKnown RBP18.88■□□□□ 0.61
PBRM1-219ENST00000462207 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.88■□□□□ 0.61
PBRM1-219ENST00000462207 SBNO2Q9Y2G9 1366 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms