RNA–Protein interactions for RNA: ENST00000462151.5

SCAMP3-203, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 819 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-203ENST00000462151 ZFYVE9O95405 1425 aa18.18■□□□□ 0.5
SCAMP3-203ENST00000462151 XIRP1Q702N8 1843 aaKnown RBP18.18■□□□□ 0.5
SCAMP3-203ENST00000462151 E9PCH4 1651 aa18.18■□□□□ 0.5
SCAMP3-203ENST00000462151 MED1Q15648 1581 aaPredicted RBP18.17■□□□□ 0.5
SCAMP3-203ENST00000462151 RIMS2Q9UQ26 1411 aa18.17■□□□□ 0.5
SCAMP3-203ENST00000462151 TMEM131LA2VDJ0 1609 aa18.17■□□□□ 0.5
SCAMP3-203ENST00000462151 PPP1R15AO75807 674 aaPredicted RBP18.17■□□□□ 0.5
SCAMP3-203ENST00000462151 TMEM94Q12767 1356 aa18.17■□□□□ 0.5
SCAMP3-203ENST00000462151 PLEKHG1Q9ULL1 1385 aa18.17■□□□□ 0.5
SCAMP3-203ENST00000462151 MYO5BQ9ULV0 1848 aa18.16■□□□□ 0.5
SCAMP3-203ENST00000462151 NKTRP30414 1462 aaKnown RBP18.15■□□□□ 0.5
SCAMP3-203ENST00000462151 CHGAP10645 457 aaKnown RBP18.15■□□□□ 0.5
SCAMP3-203ENST00000462151 PROSER2Q86WR7 435 aaPredicted RBP18.15■□□□□ 0.5
SCAMP3-203ENST00000462151 NWD1Q149M9 1564 aa18.14■□□□□ 0.49
SCAMP3-203ENST00000462151 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.14■□□□□ 0.49
SCAMP3-203ENST00000462151 SENP3Q9H4L4 574 aaPredicted RBP18.13■□□□□ 0.49
SCAMP3-203ENST00000462151 FAM135BQ49AJ0 1406 aa18.1■□□□□ 0.49
SCAMP3-203ENST00000462151 RRBP1Q9P2E9 1410 aaKnown RBP18.1■□□□□ 0.49
SCAMP3-203ENST00000462151 TBX22Q9Y458 520 aa18.1■□□□□ 0.49
SCAMP3-203ENST00000462151 MSH6P52701 1360 aa18.08■□□□□ 0.49
SCAMP3-203ENST00000462151 RBM33Q96EV2 1170 aaKnown RBP18.08■□□□□ 0.48
SCAMP3-203ENST00000462151 CHD2O14647 1828 aaKnown RBP18.07■□□□□ 0.48
SCAMP3-203ENST00000462151 PHF23Q9BUL5 403 aaPredicted RBP18.07■□□□□ 0.48
SCAMP3-203ENST00000462151 DIP2AQ14689 1571 aa18.07■□□□□ 0.48
SCAMP3-203ENST00000462151 NUTM2DQ5VT03 806 aaPredicted RBP18.05■□□□□ 0.48
SCAMP3-203ENST00000462151 ADAMTS13Q76LX8 1427 aa18.05■□□□□ 0.48
SCAMP3-203ENST00000462151 PIK3R4Q99570 1358 aa18.04■□□□□ 0.48
SCAMP3-203ENST00000462151 SPHKAPQ2M3C7 1700 aa18.04■□□□□ 0.48
SCAMP3-203ENST00000462151 NAIPQ13075 1403 aa18.03■□□□□ 0.48
SCAMP3-203ENST00000462151 NCOA3Q9Y6Q9 1424 aa18.03■□□□□ 0.48
SCAMP3-203ENST00000462151 ROBO1Q9Y6N7 1651 aa18.03■□□□□ 0.48
SCAMP3-203ENST00000462151 TRPM2O94759 1503 aa18.01■□□□□ 0.47
SCAMP3-203ENST00000462151 SLAIN2Q9P270 581 aa18■□□□□ 0.47
SCAMP3-203ENST00000462151 ZNF326Q5BKZ1 582 aaKnown RBP17.99■□□□□ 0.47
SCAMP3-203ENST00000462151 C14orf37Q86TY3 774 aa17.99■□□□□ 0.47
SCAMP3-203ENST00000462151 HFM1A2PYH4 1435 aa17.97■□□□□ 0.47
SCAMP3-203ENST00000462151 SETBP1Q9Y6X0 1596 aa17.96■□□□□ 0.47
SCAMP3-203ENST00000462151 CADPS2Q86UW7 1296 aa17.95■□□□□ 0.46
SCAMP3-203ENST00000462151 TRIM52Q96A61 297 aa17.95■□□□□ 0.46
SCAMP3-203ENST00000462151 C19orf44Q9H6X5 657 aa17.95■□□□□ 0.46
SCAMP3-203ENST00000462151 AMOTL2Q9Y2J4 779 aa17.95■□□□□ 0.46
SCAMP3-203ENST00000462151 CLTCL1P53675 1640 aa17.94■□□□□ 0.46
SCAMP3-203ENST00000462151 PTPRUQ92729 1446 aa17.94■□□□□ 0.46
SCAMP3-203ENST00000462151 NRXN3Q9Y4C0 1643 aa17.94■□□□□ 0.46
SCAMP3-203ENST00000462151 ATF3P18847 181 aa17.93■□□□□ 0.46
SCAMP3-203ENST00000462151 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.92■□□□□ 0.46
SCAMP3-203ENST00000462151 NEXMIFQ5QGS0 1516 aa17.92■□□□□ 0.46
SCAMP3-203ENST00000462151 PHLPP1O60346 1717 aa17.92■□□□□ 0.46
SCAMP3-203ENST00000462151 KIF1BO60333 1816 aa17.91■□□□□ 0.46
SCAMP3-203ENST00000462151 XRN1Q8IZH2 1706 aaKnown RBP17.9■□□□□ 0.46
SCAMP3-203ENST00000462151 SLC4A1APQ9BWU0 796 aaKnown RBP17.9■□□□□ 0.46
SCAMP3-203ENST00000462151 JCADQ9P266 1359 aa17.9■□□□□ 0.46
SCAMP3-203ENST00000462151 RGS17Q9UGC6 210 aaPredicted RBP17.89■□□□□ 0.45
SCAMP3-203ENST00000462151 DCCP43146 1447 aa17.89■□□□□ 0.45
SCAMP3-203ENST00000462151 METP08581 1390 aa17.88■□□□□ 0.45
SCAMP3-203ENST00000462151 COL16A1Q07092 1604 aaPredicted RBP17.87■□□□□ 0.45
SCAMP3-203ENST00000462151 VGFO15240 615 aaPredicted RBP17.86■□□□□ 0.45
SCAMP3-203ENST00000462151 AHDC1Q5TGY3 1603 aaPredicted RBP17.85■□□□□ 0.45
SCAMP3-203ENST00000462151 RPGRIP1LQ68CZ1 1315 aa17.84■□□□□ 0.45
SCAMP3-203ENST00000462151 BRINP3Q76B58 766 aa17.82■□□□□ 0.44
SCAMP3-203ENST00000462151 ADGRL3Q9HAR2 1447 aa17.81■□□□□ 0.44
SCAMP3-203ENST00000462151 SPATA31A6Q5VVP1 1343 aa17.81■□□□□ 0.44
SCAMP3-203ENST00000462151 POTEAQ6S8J7 498 aa17.8■□□□□ 0.44
SCAMP3-203ENST00000462151 MST1RQ04912 1400 aa17.8■□□□□ 0.44
SCAMP3-203ENST00000462151 ASXL1Q8IXJ9 1541 aa17.79■□□□□ 0.44
SCAMP3-203ENST00000462151 PTCH1Q13635 1447 aa17.79■□□□□ 0.44
SCAMP3-203ENST00000462151 SHPRHQ149N8 1683 aa17.78■□□□□ 0.44
SCAMP3-203ENST00000462151 FOXD1Q16676 465 aa17.78■□□□□ 0.44
SCAMP3-203ENST00000462151 CCDC144AA2RUR9 1427 aa17.78■□□□□ 0.44
SCAMP3-203ENST00000462151 PPLO60437 1756 aa17.78■□□□□ 0.44
SCAMP3-203ENST00000462151 SETD1AO15047 1707 aaKnown RBP17.78■□□□□ 0.44
SCAMP3-203ENST00000462151 NALCNQ8IZF0 1738 aa17.77■□□□□ 0.44
SCAMP3-203ENST00000462151 PRAG1Q86YV5 1406 aa17.76■□□□□ 0.43
SCAMP3-203ENST00000462151 ACIN1Q9UKV3 1341 aaKnown RBP17.75■□□□□ 0.43
SCAMP3-203ENST00000462151 MEX3CQ5U5Q3 659 aaKnown RBP17.75■□□□□ 0.43
SCAMP3-203ENST00000462151 MPHOSPH9Q99550 1183 aa17.75■□□□□ 0.43
SCAMP3-203ENST00000462151 LRP6O75581 1613 aa17.75■□□□□ 0.43
SCAMP3-203ENST00000462151 ROBO2Q9HCK4 1378 aa17.75■□□□□ 0.43
SCAMP3-203ENST00000462151 SETD5Q9C0A6 1442 aa17.74■□□□□ 0.43
SCAMP3-203ENST00000462151 NHSL1Q5SYE7 1610 aa17.74■□□□□ 0.43
SCAMP3-203ENST00000462151 SPATA31E1Q6ZUB1 1445 aa17.72■□□□□ 0.43
SCAMP3-203ENST00000462151 C1orf167Q5SNV9 1468 aa17.71■□□□□ 0.43
SCAMP3-203ENST00000462151 ANKRD30BQ9BXX2 1392 aa17.71■□□□□ 0.43
SCAMP3-203ENST00000462151 RGL3Q3MIN7 710 aa17.71■□□□□ 0.43
SCAMP3-203ENST00000462151 LRRC59Q96AG4 307 aaKnown RBP17.71■□□□□ 0.43
SCAMP3-203ENST00000462151 ZNF772Q68DY9 489 aaPredicted RBP17.7■□□□□ 0.42
SCAMP3-203ENST00000462151 ADGRF5Q8IZF2 1346 aa17.7■□□□□ 0.42
SCAMP3-203ENST00000462151 NUTM2BA6NNL0 878 aaPredicted RBP17.69■□□□□ 0.42
SCAMP3-203ENST00000462151 NUTM2EB1AL46 878 aaPredicted RBP17.69■□□□□ 0.42
SCAMP3-203ENST00000462151 NUTM2AQ8IVF1 878 aaPredicted RBP17.69■□□□□ 0.42
SCAMP3-203ENST00000462151 IFT172Q9UG01 1749 aa17.67■□□□□ 0.42
SCAMP3-203ENST00000462151 DDX17Q92841 729 aaKnown RBP17.67■□□□□ 0.42
SCAMP3-203ENST00000462151 ORAI2Q96SN7 254 aa17.65■□□□□ 0.42
SCAMP3-203ENST00000462151 LAMC1P11047 1609 aa17.65■□□□□ 0.42
SCAMP3-203ENST00000462151 PNPLA6Q8IY17 1366 aa17.65■□□□□ 0.42
SCAMP3-203ENST00000462151 TECPR2O15040 1411 aa17.64■□□□□ 0.42
SCAMP3-203ENST00000462151 CDC42BPGQ6DT37 1551 aa17.64■□□□□ 0.41
SCAMP3-203ENST00000462151 LRPPRCP42704 1394 aaKnown RBP17.64■□□□□ 0.41
SCAMP3-203ENST00000462151 PIK3C2GO75747 1445 aa17.64■□□□□ 0.41
SCAMP3-203ENST00000462151 STK26Q9P289 416 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms