RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 NUTM2DQ5VT03 806 aaPredicted RBP15.11■□□□□ 0.01
SYN3-206ENST00000461446 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
SYN3-206ENST00000461446 TMEM131LA2VDJ0 1609 aa15.1■□□□□ 0.01
SYN3-206ENST00000461446 BCANQ96GW7 911 aa15.1■□□□□ 0.01
SYN3-206ENST00000461446 ZFYVE9O95405 1425 aa15.09■□□□□ 0.01
SYN3-206ENST00000461446 RIMS2Q9UQ26 1411 aa15.09■□□□□ 0.01
SYN3-206ENST00000461446 LRRC7Q96NW7 1537 aa15.07■□□□□ 0
SYN3-206ENST00000461446 PPP1R15AO75807 674 aaPredicted RBP15.07■□□□□ 0
SYN3-206ENST00000461446 PIP4K2BP78356 416 aa15.06■□□□□ 0
SYN3-206ENST00000461446 HDGFP51858 240 aaKnown RBP15.05■□□□□ -0
SYN3-206ENST00000461446 SLC4A1APQ9BWU0 796 aaKnown RBP15.05■□□□□ -0
SYN3-206ENST00000461446 SCAF1Q9H7N4 1312 aaKnown RBP15.05■□□□□ -0
SYN3-206ENST00000461446 SPHKAPQ2M3C7 1700 aa15.05■□□□□ -0
SYN3-206ENST00000461446 PLEKHG1Q9ULL1 1385 aa15.04■□□□□ -0
SYN3-206ENST00000461446 TOM1O60784 492 aa15.04■□□□□ -0
SYN3-206ENST00000461446 KCNA6P17658 529 aa15.03■□□□□ -0
SYN3-206ENST00000461446 FOXD1Q16676 465 aa15.03■□□□□ -0
SYN3-206ENST00000461446 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.03■□□□□ -0
SYN3-206ENST00000461446 RBM33Q96EV2 1170 aaKnown RBP15.03■□□□□ -0
SYN3-206ENST00000461446 MPHOSPH9Q99550 1183 aa15.03■□□□□ -0
SYN3-206ENST00000461446 PCGF6Q9BYE7 350 aa15.02■□□□□ -0
SYN3-206ENST00000461446 ZNF326Q5BKZ1 582 aaKnown RBP15.01□□□□□ -0.01
SYN3-206ENST00000461446 ALKQ9UM73 1620 aa15.01□□□□□ -0.01
SYN3-206ENST00000461446 CLTCL1P53675 1640 aa15□□□□□ -0.01
SYN3-206ENST00000461446 TRPM2O94759 1503 aa15□□□□□ -0.01
SYN3-206ENST00000461446 TMEM94Q12767 1356 aa14.99□□□□□ -0.01
SYN3-206ENST00000461446 PROSER2Q86WR7 435 aaPredicted RBP14.99□□□□□ -0.01
SYN3-206ENST00000461446 TBX22Q9Y458 520 aa14.99□□□□□ -0.01
SYN3-206ENST00000461446 ADAMTS13Q76LX8 1427 aa14.99□□□□□ -0.01
SYN3-206ENST00000461446 XIRP1Q702N8 1843 aaKnown RBP14.99□□□□□ -0.01
SYN3-206ENST00000461446 HSPA1LP34931 641 aa14.98□□□□□ -0.01
SYN3-206ENST00000461446 NWD1Q149M9 1564 aa14.95□□□□□ -0.02
SYN3-206ENST00000461446 CHD2O14647 1828 aaKnown RBP14.94□□□□□ -0.02
SYN3-206ENST00000461446 KIF1BO60333 1816 aa14.93□□□□□ -0.02
SYN3-206ENST00000461446 NKTRP30414 1462 aaKnown RBP14.93□□□□□ -0.02
SYN3-206ENST00000461446 NEXMIFQ5QGS0 1516 aa14.92□□□□□ -0.02
SYN3-206ENST00000461446 NRXN3Q9Y4C0 1643 aa14.92□□□□□ -0.02
SYN3-206ENST00000461446 PTPRUQ92729 1446 aa14.92□□□□□ -0.02
SYN3-206ENST00000461446 AMOTL2Q9Y2J4 779 aa14.91□□□□□ -0.02
SYN3-206ENST00000461446 DIP2AQ14689 1571 aa14.9□□□□□ -0.02
SYN3-206ENST00000461446 METP08581 1390 aa14.9□□□□□ -0.02
SYN3-206ENST00000461446 SETBP1Q9Y6X0 1596 aa14.9□□□□□ -0.02
SYN3-206ENST00000461446 PIK3R4Q99570 1358 aa14.89□□□□□ -0.03
SYN3-206ENST00000461446 DISP3Q9P2K9 1392 aa14.89□□□□□ -0.03
SYN3-206ENST00000461446 MSH6P52701 1360 aa14.88□□□□□ -0.03
SYN3-206ENST00000461446 RGL3Q3MIN7 710 aa14.88□□□□□ -0.03
SYN3-206ENST00000461446 C14orf37Q86TY3 774 aa14.88□□□□□ -0.03
SYN3-206ENST00000461446 CCDC144AA2RUR9 1427 aa14.88□□□□□ -0.03
SYN3-206ENST00000461446 ANKRD30BQ9BXX2 1392 aa14.87□□□□□ -0.03
SYN3-206ENST00000461446 VGFO15240 615 aaPredicted RBP14.87□□□□□ -0.03
SYN3-206ENST00000461446 RPGRIP1LQ68CZ1 1315 aa14.87□□□□□ -0.03
SYN3-206ENST00000461446 DHX57Q6P158 1386 aaKnown RBP14.86□□□□□ -0.03
SYN3-206ENST00000461446 SLAIN2Q9P270 581 aa14.85□□□□□ -0.03
SYN3-206ENST00000461446 SPATA31E1Q6ZUB1 1445 aa14.84□□□□□ -0.03
SYN3-206ENST00000461446 ADGRF5Q8IZF2 1346 aa14.84□□□□□ -0.03
SYN3-206ENST00000461446 FAM135BQ49AJ0 1406 aa14.83□□□□□ -0.03
SYN3-206ENST00000461446 C19orf44Q9H6X5 657 aa14.83□□□□□ -0.04
SYN3-206ENST00000461446 PPLO60437 1756 aa14.83□□□□□ -0.04
SYN3-206ENST00000461446 XRN1Q8IZH2 1706 aaKnown RBP14.82□□□□□ -0.04
SYN3-206ENST00000461446 NCOA3Q9Y6Q9 1424 aa14.82□□□□□ -0.04
SYN3-206ENST00000461446 ILDR2Q71H61 639 aa14.81□□□□□ -0.04
SYN3-206ENST00000461446 ROBO1Q9Y6N7 1651 aa14.81□□□□□ -0.04
SYN3-206ENST00000461446 ATF3P18847 181 aa14.8□□□□□ -0.04
SYN3-206ENST00000461446 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.8□□□□□ -0.04
SYN3-206ENST00000461446 SETD1AO15047 1707 aaKnown RBP14.79□□□□□ -0.04
SYN3-206ENST00000461446 CADPS2Q86UW7 1296 aa14.79□□□□□ -0.04
SYN3-206ENST00000461446 MED1Q15648 1581 aaPredicted RBP14.77□□□□□ -0.04
SYN3-206ENST00000461446 ROBO2Q9HCK4 1378 aa14.77□□□□□ -0.04
SYN3-206ENST00000461446 IFT172Q9UG01 1749 aa14.75□□□□□ -0.05
SYN3-206ENST00000461446 TMEM132EQ6IEE7 984 aa14.75□□□□□ -0.05
SYN3-206ENST00000461446 SIN3AQ96ST3 1273 aa14.75□□□□□ -0.05
SYN3-206ENST00000461446 STK26Q9P289 416 aa14.75□□□□□ -0.05
SYN3-206ENST00000461446 ADGRL3Q9HAR2 1447 aa14.74□□□□□ -0.05
SYN3-206ENST00000461446 BRINP3Q76B58 766 aa14.73□□□□□ -0.05
SYN3-206ENST00000461446 PIK3C2GO75747 1445 aa14.73□□□□□ -0.05
SYN3-206ENST00000461446 PTCH1Q13635 1447 aa14.73□□□□□ -0.05
SYN3-206ENST00000461446 DCCP43146 1447 aa14.72□□□□□ -0.05
SYN3-206ENST00000461446 MST1RQ04912 1400 aa14.72□□□□□ -0.05
SYN3-206ENST00000461446 NALCNQ8IZF0 1738 aa14.72□□□□□ -0.05
SYN3-206ENST00000461446 NEUROD1Q13562 356 aa14.71□□□□□ -0.05
SYN3-206ENST00000461446 CFAP70Q5T0N1 1121 aa14.71□□□□□ -0.05
SYN3-206ENST00000461446 WAPLQ7Z5K2 1190 aa14.71□□□□□ -0.05
SYN3-206ENST00000461446 C14orf93Q9H972 538 aaKnown RBP14.71□□□□□ -0.05
SYN3-206ENST00000461446 PHLPP1O60346 1717 aa14.71□□□□□ -0.05
SYN3-206ENST00000461446 ASXL1Q8IXJ9 1541 aa14.71□□□□□ -0.06
SYN3-206ENST00000461446 PRAG1Q86YV5 1406 aa14.7□□□□□ -0.06
SYN3-206ENST00000461446 CCER1Q8TC90 406 aaPredicted RBP14.7□□□□□ -0.06
SYN3-206ENST00000461446 PHF23Q9BUL5 403 aaPredicted RBP14.7□□□□□ -0.06
SYN3-206ENST00000461446 KDM2AQ9Y2K7 1162 aa14.7□□□□□ -0.06
SYN3-206ENST00000461446 CLSPNQ9HAW4 1339 aa14.69□□□□□ -0.06
SYN3-206ENST00000461446 DDX17Q92841 729 aaKnown RBP14.69□□□□□ -0.06
SYN3-206ENST00000461446 LRPPRCP42704 1394 aaKnown RBP14.69□□□□□ -0.06
SYN3-206ENST00000461446 NRXN1Q9ULB1 1477 aa14.69□□□□□ -0.06
SYN3-206ENST00000461446 COL16A1Q07092 1604 aaPredicted RBP14.68□□□□□ -0.06
SYN3-206ENST00000461446 DCAF11Q8TEB1 546 aa14.68□□□□□ -0.06
SYN3-206ENST00000461446 PLEKHH1Q9ULM0 1364 aa14.68□□□□□ -0.06
SYN3-206ENST00000461446 MYOM2P54296 1465 aa14.68□□□□□ -0.06
SYN3-206ENST00000461446 STAC3Q96MF2 364 aa14.67□□□□□ -0.06
SYN3-206ENST00000461446 ABCC11Q96J66 1382 aa14.67□□□□□ -0.06
SYN3-206ENST00000461446 YTHDC2Q9H6S0 1430 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms