RNA–Protein interactions for RNA: ENST00000461379.5

GAPVD1-210, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-210ENST00000461379 NPHP4O75161 1426 aaPredicted RBP23.5■■□□□ 1.35
GAPVD1-210ENST00000461379 NUTM2DQ5VT03 806 aaPredicted RBP23.49■■□□□ 1.35
GAPVD1-210ENST00000461379 MED14O60244 1454 aa23.49■■□□□ 1.35
GAPVD1-210ENST00000461379 PPP1R15AO75807 674 aaPredicted RBP23.48■■□□□ 1.35
GAPVD1-210ENST00000461379 NEURL4Q96JN8 1562 aa23.48■■□□□ 1.35
GAPVD1-210ENST00000461379 DHX57Q6P158 1386 aaKnown RBP23.47■■□□□ 1.35
GAPVD1-210ENST00000461379 RGL3Q3MIN7 710 aa23.46■■□□□ 1.35
GAPVD1-210ENST00000461379 SPATA31E1Q6ZUB1 1445 aa23.44■■□□□ 1.34
GAPVD1-210ENST00000461379 SENP3Q9H4L4 574 aaPredicted RBP23.44■■□□□ 1.34
GAPVD1-210ENST00000461379 RPGRIP1LQ68CZ1 1315 aa23.43■■□□□ 1.34
GAPVD1-210ENST00000461379 BCANQ96GW7 911 aa23.43■■□□□ 1.34
GAPVD1-210ENST00000461379 PLEKHG1Q9ULL1 1385 aa23.41■■□□□ 1.34
GAPVD1-210ENST00000461379 POLR1AO95602 1720 aaPredicted RBP23.39■■□□□ 1.34
GAPVD1-210ENST00000461379 SLC26A8Q96RN1 970 aa23.39■■□□□ 1.33
GAPVD1-210ENST00000461379 VGFO15240 615 aaPredicted RBP23.38■■□□□ 1.33
GAPVD1-210ENST00000461379 MYO5BQ9ULV0 1848 aa23.38■■□□□ 1.33
GAPVD1-210ENST00000461379 NEXMIFQ5QGS0 1516 aa23.37■■□□□ 1.33
GAPVD1-210ENST00000461379 ZNF335Q9H4Z2 1342 aaPredicted RBP23.36■■□□□ 1.33
GAPVD1-210ENST00000461379 KIF1BO60333 1816 aa23.36■■□□□ 1.33
GAPVD1-210ENST00000461379 IQGAP1P46940 1657 aa23.35■■□□□ 1.33
GAPVD1-210ENST00000461379 SIN3AQ96ST3 1273 aa23.35■■□□□ 1.33
GAPVD1-210ENST00000461379 TBX22Q9Y458 520 aa23.32■■□□□ 1.32
GAPVD1-210ENST00000461379 ADAMTS13Q76LX8 1427 aa23.31■■□□□ 1.32
GAPVD1-210ENST00000461379 ADGRF5Q8IZF2 1346 aa23.31■■□□□ 1.32
GAPVD1-210ENST00000461379 NEUROD1Q13562 356 aa23.3■■□□□ 1.32
GAPVD1-210ENST00000461379 DCAF11Q8TEB1 546 aa23.27■■□□□ 1.32
GAPVD1-210ENST00000461379 KDM2AQ9Y2K7 1162 aa23.26■■□□□ 1.31
GAPVD1-210ENST00000461379 SETBP1Q9Y6X0 1596 aa23.25■■□□□ 1.31
GAPVD1-210ENST00000461379 LTBP4Q8N2S1 1624 aa23.25■■□□□ 1.31
GAPVD1-210ENST00000461379 KCNA6P17658 529 aa23.24■■□□□ 1.31
GAPVD1-210ENST00000461379 CERKQ8TCT0 537 aa23.23■■□□□ 1.31
GAPVD1-210ENST00000461379 FBXO41Q8TF61 875 aa23.22■■□□□ 1.31
GAPVD1-210ENST00000461379 STAC3Q96MF2 364 aa23.22■■□□□ 1.31
GAPVD1-210ENST00000461379 METP08581 1390 aa23.21■■□□□ 1.31
GAPVD1-210ENST00000461379 MYOM2P54296 1465 aa23.21■■□□□ 1.31
GAPVD1-210ENST00000461379 PPLO60437 1756 aa23.21■■□□□ 1.31
GAPVD1-210ENST00000461379 NRXN3Q9Y4C0 1643 aa23.2■■□□□ 1.3
GAPVD1-210ENST00000461379 DIP2AQ14689 1571 aa23.2■■□□□ 1.3
GAPVD1-210ENST00000461379 PIK3R4Q99570 1358 aa23.2■■□□□ 1.3
GAPVD1-210ENST00000461379 L3MBTL2Q969R5 705 aa23.2■■□□□ 1.3
GAPVD1-210ENST00000461379 NRXN1Q9ULB1 1477 aa23.19■■□□□ 1.3
GAPVD1-210ENST00000461379 PIK3C2GO75747 1445 aa23.19■■□□□ 1.3
GAPVD1-210ENST00000461379 CPS1P31327 1500 aa23.18■■□□□ 1.3
GAPVD1-210ENST00000461379 CCER1Q8TC90 406 aaPredicted RBP23.17■■□□□ 1.3
GAPVD1-210ENST00000461379 C14orf93Q9H972 538 aaKnown RBP23.17■■□□□ 1.3
GAPVD1-210ENST00000461379 AMOTL2Q9Y2J4 779 aa23.17■■□□□ 1.3
GAPVD1-210ENST00000461379 PTPRUQ92729 1446 aa23.16■■□□□ 1.3
GAPVD1-210ENST00000461379 ALKQ9UM73 1620 aa23.16■■□□□ 1.3
GAPVD1-210ENST00000461379 IFT172Q9UG01 1749 aa23.16■■□□□ 1.3
GAPVD1-210ENST00000461379 CLSPNQ9HAW4 1339 aa23.15■■□□□ 1.3
GAPVD1-210ENST00000461379 CFAP70Q5T0N1 1121 aa23.15■■□□□ 1.3
GAPVD1-210ENST00000461379 PROSER2Q86WR7 435 aaPredicted RBP23.14■■□□□ 1.29
GAPVD1-210ENST00000461379 TMEM132EQ6IEE7 984 aa23.12■■□□□ 1.29
GAPVD1-210ENST00000461379 LRRC7Q96NW7 1537 aa23.12■■□□□ 1.29
GAPVD1-210ENST00000461379 NWD1Q149M9 1564 aa23.11■■□□□ 1.29
GAPVD1-210ENST00000461379 TONSLQ96HA7 1378 aa23.11■■□□□ 1.29
GAPVD1-210ENST00000461379 STRCP1A6NGW2 1772 aa23.1■■□□□ 1.29
GAPVD1-210ENST00000461379 RBM33Q96EV2 1170 aaKnown RBP23.1■■□□□ 1.29
GAPVD1-210ENST00000461379 NKTRP30414 1462 aaKnown RBP23.1■■□□□ 1.29
GAPVD1-210ENST00000461379 TMEM94Q12767 1356 aa23.09■■□□□ 1.29
GAPVD1-210ENST00000461379 STK26Q9P289 416 aa23.07■■□□□ 1.28
GAPVD1-210ENST00000461379 PRAG1Q86YV5 1406 aa23.07■■□□□ 1.28
GAPVD1-210ENST00000461379 IQSEC2Q5JU85 1478 aa23.05■■□□□ 1.28
GAPVD1-210ENST00000461379 SETD1AO15047 1707 aaKnown RBP23.05■■□□□ 1.28
GAPVD1-210ENST00000461379 LRPPRCP42704 1394 aaKnown RBP23.04■■□□□ 1.28
GAPVD1-210ENST00000461379 ASXL1Q8IXJ9 1541 aa23.04■■□□□ 1.28
GAPVD1-210ENST00000461379 CHD2O14647 1828 aaKnown RBP23.04■■□□□ 1.28
GAPVD1-210ENST00000461379 ABCC11Q96J66 1382 aa23.02■■□□□ 1.28
GAPVD1-210ENST00000461379 ROBO2Q9HCK4 1378 aa23.02■■□□□ 1.28
GAPVD1-210ENST00000461379 YTHDC2Q9H6S0 1430 aaKnown RBP23.02■■□□□ 1.28
GAPVD1-210ENST00000461379 XRN1Q8IZH2 1706 aaKnown RBP23.01■■□□□ 1.27
GAPVD1-210ENST00000461379 NBPF1Q3BBV0 1214 aa23■■□□□ 1.27
GAPVD1-210ENST00000461379 NBPF8Q3BBV2 869 aa23■■□□□ 1.27
GAPVD1-210ENST00000461379 C14orf37Q86TY3 774 aa23■■□□□ 1.27
GAPVD1-210ENST00000461379 PTCH1Q13635 1447 aa22.99■■□□□ 1.27
GAPVD1-210ENST00000461379 NCOA3Q9Y6Q9 1424 aa22.99■■□□□ 1.27
GAPVD1-210ENST00000461379 UBAP1LF5GYI3 381 aa22.99■■□□□ 1.27
GAPVD1-210ENST00000461379 TECPR2O15040 1411 aa22.99■■□□□ 1.27
GAPVD1-210ENST00000461379 ADGRB1O14514 1584 aa22.98■■□□□ 1.27
GAPVD1-210ENST00000461379 LAMC1P11047 1609 aa22.98■■□□□ 1.27
GAPVD1-210ENST00000461379 TIMELESSQ9UNS1 1208 aa22.98■■□□□ 1.27
GAPVD1-210ENST00000461379 WAPLQ7Z5K2 1190 aa22.96■■□□□ 1.27
GAPVD1-210ENST00000461379 SIRT1Q96EB6 747 aa22.96■■□□□ 1.27
GAPVD1-210ENST00000461379 TRAK1Q9UPV9 953 aa22.96■■□□□ 1.27
GAPVD1-210ENST00000461379 MSH6P52701 1360 aa22.96■■□□□ 1.27
GAPVD1-210ENST00000461379 TOM1O60784 492 aa22.95■■□□□ 1.26
GAPVD1-210ENST00000461379 C19orf44Q9H6X5 657 aa22.95■■□□□ 1.26
GAPVD1-210ENST00000461379 PLEKHH1Q9ULM0 1364 aa22.92■■□□□ 1.26
GAPVD1-210ENST00000461379 PRAM1Q96QH2 718 aa22.92■■□□□ 1.26
GAPVD1-210ENST00000461379 FAM135BQ49AJ0 1406 aa22.91■■□□□ 1.26
GAPVD1-210ENST00000461379 POGKQ9P215 609 aa22.9■■□□□ 1.26
GAPVD1-210ENST00000461379 ADGRL3Q9HAR2 1447 aa22.9■■□□□ 1.26
GAPVD1-210ENST00000461379 ROCK2O75116 1388 aaKnown RBP22.89■■□□□ 1.26
GAPVD1-210ENST00000461379 ATF3P18847 181 aa22.89■■□□□ 1.25
GAPVD1-210ENST00000461379 XIRP1Q702N8 1843 aaKnown RBP22.88■■□□□ 1.25
GAPVD1-210ENST00000461379 PIP4K2BP78356 416 aa22.88■■□□□ 1.25
GAPVD1-210ENST00000461379 SAFB2Q14151 953 aaKnown RBP eCLIP22.88■■□□□ 1.25
GAPVD1-210ENST00000461379 CADPS2Q86UW7 1296 aa22.88■■□□□ 1.25
GAPVD1-210ENST00000461379 DLC1Q96QB1 1528 aa22.87■■□□□ 1.25
GAPVD1-210ENST00000461379 KIAA1210Q9ULL0 1709 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms