RNA–Protein interactions for RNA: ENST00000461111.1

AGRN-203, Transcript of agrin, humanhuman

TSL 1 (best)

Gene AGRN, Length 3,385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-203ENST00000461111 NCLP19338 710 aaKnown RBP15.75■□□□□ 0.11
AGRN-203ENST00000461111 R3HCC1Q9Y3T6 440 aaKnown RBP15.75■□□□□ 0.11
AGRN-203ENST00000461111 TARBP1Q13395 1621 aaKnown RBP15.75■□□□□ 0.11
AGRN-203ENST00000461111 PCDHB15Q9Y5E8 787 aa15.75■□□□□ 0.11
AGRN-203ENST00000461111 C9orf84Q5VXU9 1444 aa15.75■□□□□ 0.11
AGRN-203ENST00000461111 CENPJQ9HC77 1338 aaPredicted RBP15.75■□□□□ 0.11
AGRN-203ENST00000461111 NUTM2DQ5VT03 806 aaPredicted RBP15.75■□□□□ 0.11
AGRN-203ENST00000461111 ANP32BQ92688 251 aaKnown RBP15.75■□□□□ 0.11
AGRN-203ENST00000461111 TPM2P07951 284 aa15.74■□□□□ 0.11
AGRN-203ENST00000461111 CGNL1Q0VF96 1302 aa15.74■□□□□ 0.11
AGRN-203ENST00000461111 KDM5CP41229 1560 aa15.73■□□□□ 0.11
AGRN-203ENST00000461111 TROQ12816 1431 aaPredicted RBP15.73■□□□□ 0.11
AGRN-203ENST00000461111 GCC2Q8IWJ2 1684 aa15.73■□□□□ 0.11
AGRN-203ENST00000461111 LRRIQ1Q96JM4 1722 aa15.73■□□□□ 0.11
AGRN-203ENST00000461111 IQGAP2Q13576 1575 aa15.73■□□□□ 0.11
AGRN-203ENST00000461111 MSNP26038 577 aaKnown RBP15.73■□□□□ 0.11
AGRN-203ENST00000461111 TESK2Q96S53 571 aa15.73■□□□□ 0.11
AGRN-203ENST00000461111 PRDM10Q9NQV6 1147 aa15.73■□□□□ 0.11
AGRN-203ENST00000461111 FTSJ3Q8IY81 847 aaKnown RBP15.72■□□□□ 0.11
AGRN-203ENST00000461111 WDR62O43379 1518 aa15.72■□□□□ 0.11
AGRN-203ENST00000461111 ZNF608Q9ULD9 1512 aaPredicted RBP15.72■□□□□ 0.11
AGRN-203ENST00000461111 HSP90AB1P08238 724 aaKnown RBP15.72■□□□□ 0.11
AGRN-203ENST00000461111 DDX11L8A8MPP1 907 aa15.72■□□□□ 0.11
AGRN-203ENST00000461111 NUP153P49790 1475 aaKnown RBP15.71■□□□□ 0.11
AGRN-203ENST00000461111 BLMP54132 1417 aaPredicted RBP15.71■□□□□ 0.11
AGRN-203ENST00000461111 MORC1Q86VD1 984 aa15.7■□□□□ 0.1
AGRN-203ENST00000461111 MRC2Q9UBG0 1479 aa15.7■□□□□ 0.1
AGRN-203ENST00000461111 ARHGEF11O15085 1522 aa15.7■□□□□ 0.1
AGRN-203ENST00000461111 GPATCH8Q9UKJ3 1502 aaKnown RBP15.7■□□□□ 0.1
AGRN-203ENST00000461111 U2SURPO15042 1029 aaKnown RBP15.7■□□□□ 0.1
AGRN-203ENST00000461111 SAMD9Q5K651 1589 aa15.7■□□□□ 0.1
AGRN-203ENST00000461111 E9PSI1 815 aa15.7■□□□□ 0.1
AGRN-203ENST00000461111 RALGAPBQ86X10 1494 aa15.69■□□□□ 0.1
AGRN-203ENST00000461111 PMFBP1Q8TBY8 1022 aa15.69■□□□□ 0.1
AGRN-203ENST00000461111 RLBP1P12271 317 aa15.69■□□□□ 0.1
AGRN-203ENST00000461111 TNPO1Q92973 898 aaKnown RBP15.69■□□□□ 0.1
AGRN-203ENST00000461111 ERCC6Q03468 1493 aa15.68■□□□□ 0.1
AGRN-203ENST00000461111 MBD5Q9P267 1494 aa15.68■□□□□ 0.1
AGRN-203ENST00000461111 EIF3AQ14152 1382 aaKnown RBP15.68■□□□□ 0.1
AGRN-203ENST00000461111 CDCA8Q53HL2 280 aa15.68■□□□□ 0.1
AGRN-203ENST00000461111 ZHX1Q9UKY1 873 aaPredicted RBP15.68■□□□□ 0.1
AGRN-203ENST00000461111 TRAK1Q9UPV9 953 aa15.68■□□□□ 0.1
AGRN-203ENST00000461111 CFAP70Q5T0N1 1121 aa15.68■□□□□ 0.1
AGRN-203ENST00000461111 RWDD1Q9H446 243 aaPredicted RBP15.68■□□□□ 0.1
AGRN-203ENST00000461111 ZMYM4Q5VZL5 1548 aa15.68■□□□□ 0.1
AGRN-203ENST00000461111 NASPP49321 788 aaPredicted RBP15.67■□□□□ 0.1
AGRN-203ENST00000461111 ERBINQ96RT1 1412 aa15.67■□□□□ 0.1
AGRN-203ENST00000461111 U2AF1L5P0DN76 240 aaPredicted RBP15.67■□□□□ 0.1
AGRN-203ENST00000461111 U2AF1Q01081 240 aaKnown RBP eCLIP15.67■□□□□ 0.1
AGRN-203ENST00000461111 PDE3AQ14432 1141 aa15.67■□□□□ 0.1
AGRN-203ENST00000461111 POLR1AO95602 1720 aaPredicted RBP15.66■□□□□ 0.1
AGRN-203ENST00000461111 ZNF521Q96K83 1311 aa15.66■□□□□ 0.1
AGRN-203ENST00000461111 XPCQ01831 940 aaPredicted RBP15.66■□□□□ 0.1
AGRN-203ENST00000461111 GBP4Q96PP9 640 aa15.66■□□□□ 0.1
AGRN-203ENST00000461111 KIAA0586Q9BVV6 1533 aa15.65■□□□□ 0.1
AGRN-203ENST00000461111 CARMIL2Q6F5E8 1435 aa15.64■□□□□ 0.09
AGRN-203ENST00000461111 ITPRIPQ8IWB1 547 aa15.64■□□□□ 0.09
AGRN-203ENST00000461111 DDX49Q9Y6V7 483 aaKnown RBP15.64■□□□□ 0.09
AGRN-203ENST00000461111 RIPK4P57078 832 aa15.64■□□□□ 0.09
AGRN-203ENST00000461111 ZSCAN30Q86W11 494 aa15.64■□□□□ 0.09
AGRN-203ENST00000461111 PBRM1Q86U86 1689 aa15.63■□□□□ 0.09
AGRN-203ENST00000461111 AFAP1Q8N556 730 aa15.63■□□□□ 0.09
AGRN-203ENST00000461111 AMER1Q5JTC6 1135 aaPredicted RBP15.62■□□□□ 0.09
AGRN-203ENST00000461111 NKTRP30414 1462 aaKnown RBP15.62■□□□□ 0.09
AGRN-203ENST00000461111 KIF14Q15058 1648 aa15.62■□□□□ 0.09
AGRN-203ENST00000461111 KIF3BO15066 747 aa15.62■□□□□ 0.09
AGRN-203ENST00000461111 CALD1Q05682 793 aaKnown RBP15.62■□□□□ 0.09
AGRN-203ENST00000461111 TPRNQ4KMQ1 711 aa15.62■□□□□ 0.09
AGRN-203ENST00000461111 TCP11L2Q8N4U5 519 aa15.62■□□□□ 0.09
AGRN-203ENST00000461111 TSR2Q969E8 191 aaKnown RBP15.62■□□□□ 0.09
AGRN-203ENST00000461111 UHRF1BP1Q6BDS2 1440 aa15.62■□□□□ 0.09
AGRN-203ENST00000461111 SLC12A5Q9H2X9 1139 aa15.61■□□□□ 0.09
AGRN-203ENST00000461111 UQCRHLA0A096LP55 91 aa15.61■□□□□ 0.09
AGRN-203ENST00000461111 UQCRHP07919 91 aa15.61■□□□□ 0.09
AGRN-203ENST00000461111 TMEM132EQ6IEE7 984 aa15.61■□□□□ 0.09
AGRN-203ENST00000461111 PLEKHH2Q8IVE3 1493 aa15.61■□□□□ 0.09
AGRN-203ENST00000461111 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.6■□□□□ 0.09
AGRN-203ENST00000461111 MPNDQ8N594 471 aa15.6■□□□□ 0.09
AGRN-203ENST00000461111 SMC4Q9NTJ3 1288 aa15.6■□□□□ 0.09
AGRN-203ENST00000461111 PRDM4Q9UKN5 801 aa15.6■□□□□ 0.09
AGRN-203ENST00000461111 OFD1O75665 1012 aa15.59■□□□□ 0.09
AGRN-203ENST00000461111 CCDC173Q0VFZ6 552 aa15.59■□□□□ 0.09
AGRN-203ENST00000461111 WWC1Q8IX03 1113 aa15.59■□□□□ 0.09
AGRN-203ENST00000461111 TRMT2AQ8IZ69 625 aaKnown RBP15.59■□□□□ 0.09
AGRN-203ENST00000461111 DNMT1P26358 1616 aaKnown RBP15.59■□□□□ 0.09
AGRN-203ENST00000461111 RARSP54136 660 aaKnown RBP15.59■□□□□ 0.09
AGRN-203ENST00000461111 ELL2O00472 640 aaPredicted RBP15.59■□□□□ 0.09
AGRN-203ENST00000461111 SSFA2P28290 1259 aa15.59■□□□□ 0.09
AGRN-203ENST00000461111 STK26Q9P289 416 aa15.59■□□□□ 0.09
AGRN-203ENST00000461111 GOLGA6L22H0YM25 854 aa15.58■□□□□ 0.09
AGRN-203ENST00000461111 PRAG1Q86YV5 1406 aa15.58■□□□□ 0.09
AGRN-203ENST00000461111 NLRP1Q9C000 1473 aa15.57■□□□□ 0.08
AGRN-203ENST00000461111 RBM42Q9BTD8 480 aaKnown RBP15.57■□□□□ 0.08
AGRN-203ENST00000461111 MTHFSP49914 203 aa15.57■□□□□ 0.08
AGRN-203ENST00000461111 CAVIN1Q6NZI2 390 aaKnown RBP15.57■□□□□ 0.08
AGRN-203ENST00000461111 LNPKQ9C0E8 428 aa15.57■□□□□ 0.08
AGRN-203ENST00000461111 APBB1O00213 710 aa15.56■□□□□ 0.08
AGRN-203ENST00000461111 DNTTIP2Q5QJE6 756 aaKnown RBP15.56■□□□□ 0.08
AGRN-203ENST00000461111 SKOR2Q2VWA4 1001 aaPredicted RBP15.56■□□□□ 0.08
AGRN-203ENST00000461111 MCTP1Q6DN14 999 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms