RNA–Protein interactions for RNA: ENST00000461071.1

SLC39A1-208, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 529 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-208ENST00000461071 ROBO1Q9Y6N7 1651 aa27.01■■□□□ 1.91
SLC39A1-208ENST00000461071 SENP3Q9H4L4 574 aaPredicted RBP27■■□□□ 1.91
SLC39A1-208ENST00000461071 ZFYVE9O95405 1425 aa26.99■■□□□ 1.91
SLC39A1-208ENST00000461071 TMEM131LA2VDJ0 1609 aa26.99■■□□□ 1.91
SLC39A1-208ENST00000461071 UNC13BO14795 1591 aa26.98■■□□□ 1.91
SLC39A1-208ENST00000461071 PROSER2Q86WR7 435 aaPredicted RBP26.97■■□□□ 1.91
SLC39A1-208ENST00000461071 FAM50AQ14320 339 aaKnown RBP26.95■■□□□ 1.9
SLC39A1-208ENST00000461071 RGS17Q9UGC6 210 aaPredicted RBP26.95■■□□□ 1.9
SLC39A1-208ENST00000461071 PLEKHG1Q9ULL1 1385 aa26.95■■□□□ 1.9
SLC39A1-208ENST00000461071 E9PCH4 1651 aa26.92■■□□□ 1.9
SLC39A1-208ENST00000461071 RIMS2Q9UQ26 1411 aa26.9■■□□□ 1.9
SLC39A1-208ENST00000461071 HDGFP51858 240 aaKnown RBP26.9■■□□□ 1.9
SLC39A1-208ENST00000461071 IQGAP3Q86VI3 1631 aa26.89■■□□□ 1.9
SLC39A1-208ENST00000461071 MSH6P52701 1360 aa26.88■■□□□ 1.89
SLC39A1-208ENST00000461071 ROCK1Q13464 1354 aa26.87■■□□□ 1.89
SLC39A1-208ENST00000461071 PHLPP1O60346 1717 aa26.86■■□□□ 1.89
SLC39A1-208ENST00000461071 RBM33Q96EV2 1170 aaKnown RBP26.86■■□□□ 1.89
SLC39A1-208ENST00000461071 TBX22Q9Y458 520 aa26.86■■□□□ 1.89
SLC39A1-208ENST00000461071 NCOA3Q9Y6Q9 1424 aa26.86■■□□□ 1.89
SLC39A1-208ENST00000461071 BCANQ96GW7 911 aa26.85■■□□□ 1.89
SLC39A1-208ENST00000461071 SLAIN2Q9P270 581 aa26.85■■□□□ 1.89
SLC39A1-208ENST00000461071 DIP2AQ14689 1571 aa26.84■■□□□ 1.89
SLC39A1-208ENST00000461071 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.83■■□□□ 1.89
SLC39A1-208ENST00000461071 PPP1R15AO75807 674 aaPredicted RBP26.82■■□□□ 1.88
SLC39A1-208ENST00000461071 ADAMTS13Q76LX8 1427 aa26.8■■□□□ 1.88
SLC39A1-208ENST00000461071 PIK3R4Q99570 1358 aa26.79■■□□□ 1.88
SLC39A1-208ENST00000461071 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.78■■□□□ 1.88
SLC39A1-208ENST00000461071 COL16A1Q07092 1604 aaPredicted RBP26.77■■□□□ 1.88
SLC39A1-208ENST00000461071 POTEAQ6S8J7 498 aa26.76■■□□□ 1.87
SLC39A1-208ENST00000461071 JCADQ9P266 1359 aa26.74■■□□□ 1.87
SLC39A1-208ENST00000461071 TRPM2O94759 1503 aa26.72■■□□□ 1.87
SLC39A1-208ENST00000461071 NUP155O75694 1391 aa26.71■■□□□ 1.87
SLC39A1-208ENST00000461071 SPHKAPQ2M3C7 1700 aa26.7■■□□□ 1.87
SLC39A1-208ENST00000461071 CHGAP10645 457 aaKnown RBP26.7■■□□□ 1.86
SLC39A1-208ENST00000461071 C19orf44Q9H6X5 657 aa26.7■■□□□ 1.86
SLC39A1-208ENST00000461071 AHDC1Q5TGY3 1603 aaPredicted RBP26.69■■□□□ 1.86
SLC39A1-208ENST00000461071 CADPS2Q86UW7 1296 aa26.68■■□□□ 1.86
SLC39A1-208ENST00000461071 NRXN3Q9Y4C0 1643 aa26.68■■□□□ 1.86
SLC39A1-208ENST00000461071 SHPRHQ149N8 1683 aa26.67■■□□□ 1.86
SLC39A1-208ENST00000461071 XRN1Q8IZH2 1706 aaKnown RBP26.66■■□□□ 1.86
SLC39A1-208ENST00000461071 SETBP1Q9Y6X0 1596 aa26.66■■□□□ 1.86
SLC39A1-208ENST00000461071 NUTM2DQ5VT03 806 aaPredicted RBP26.65■■□□□ 1.86
SLC39A1-208ENST00000461071 PTPRUQ92729 1446 aa26.64■■□□□ 1.85
SLC39A1-208ENST00000461071 C14orf37Q86TY3 774 aa26.63■■□□□ 1.85
SLC39A1-208ENST00000461071 DCCP43146 1447 aa26.63■■□□□ 1.85
SLC39A1-208ENST00000461071 SPATA31A6Q5VVP1 1343 aa26.63■■□□□ 1.85
SLC39A1-208ENST00000461071 ATF3P18847 181 aa26.62■■□□□ 1.85
SLC39A1-208ENST00000461071 AMOTL2Q9Y2J4 779 aa26.61■■□□□ 1.85
SLC39A1-208ENST00000461071 LRP6O75581 1613 aa26.59■■□□□ 1.85
SLC39A1-208ENST00000461071 SETD1AO15047 1707 aaKnown RBP26.59■■□□□ 1.85
SLC39A1-208ENST00000461071 KIF1BO60333 1816 aa26.55■■□□□ 1.84
SLC39A1-208ENST00000461071 ITGAEP38570 1179 aa26.54■■□□□ 1.84
SLC39A1-208ENST00000461071 NHSL1Q5SYE7 1610 aa26.54■■□□□ 1.84
SLC39A1-208ENST00000461071 BRINP3Q76B58 766 aa26.53■■□□□ 1.84
SLC39A1-208ENST00000461071 CLTCL1P53675 1640 aa26.52■■□□□ 1.84
SLC39A1-208ENST00000461071 NEXMIFQ5QGS0 1516 aa26.51■■□□□ 1.83
SLC39A1-208ENST00000461071 ASXL1Q8IXJ9 1541 aa26.51■■□□□ 1.83
SLC39A1-208ENST00000461071 METP08581 1390 aa26.5■■□□□ 1.83
SLC39A1-208ENST00000461071 MST1RQ04912 1400 aa26.49■■□□□ 1.83
SLC39A1-208ENST00000461071 ZNF772Q68DY9 489 aaPredicted RBP26.49■■□□□ 1.83
SLC39A1-208ENST00000461071 SETD5Q9C0A6 1442 aa26.48■■□□□ 1.83
SLC39A1-208ENST00000461071 NALCNQ8IZF0 1738 aa26.47■■□□□ 1.83
SLC39A1-208ENST00000461071 ZNF326Q5BKZ1 582 aaKnown RBP26.46■■□□□ 1.83
SLC39A1-208ENST00000461071 MEX3CQ5U5Q3 659 aaKnown RBP26.46■■□□□ 1.83
SLC39A1-208ENST00000461071 ADGRL3Q9HAR2 1447 aa26.46■■□□□ 1.83
SLC39A1-208ENST00000461071 RRBP1Q9P2E9 1410 aaKnown RBP26.44■■□□□ 1.82
SLC39A1-208ENST00000461071 NAIPQ13075 1403 aa26.42■■□□□ 1.82
SLC39A1-208ENST00000461071 LAMC1P11047 1609 aa26.42■■□□□ 1.82
SLC39A1-208ENST00000461071 PPARGC1BQ86YN6 1023 aaKnown RBP26.4■■□□□ 1.82
SLC39A1-208ENST00000461071 CDK12Q9NYV4 1490 aaPredicted RBP26.4■■□□□ 1.82
SLC39A1-208ENST00000461071 LRRC59Q96AG4 307 aaKnown RBP26.38■■□□□ 1.81
SLC39A1-208ENST00000461071 PRAG1Q86YV5 1406 aa26.38■■□□□ 1.81
SLC39A1-208ENST00000461071 PTCH1Q13635 1447 aa26.37■■□□□ 1.81
SLC39A1-208ENST00000461071 PPLO60437 1756 aa26.36■■□□□ 1.81
SLC39A1-208ENST00000461071 RXRBP28702 533 aa26.34■■□□□ 1.81
SLC39A1-208ENST00000461071 NUTM2BA6NNL0 878 aaPredicted RBP26.33■■□□□ 1.81
SLC39A1-208ENST00000461071 NUTM2EB1AL46 878 aaPredicted RBP26.33■■□□□ 1.81
SLC39A1-208ENST00000461071 VGFO15240 615 aaPredicted RBP26.33■■□□□ 1.81
SLC39A1-208ENST00000461071 NUTM2AQ8IVF1 878 aaPredicted RBP26.33■■□□□ 1.81
SLC39A1-208ENST00000461071 UPF1Q92900 1129 aaKnown RBP eCLIP26.33■■□□□ 1.81
SLC39A1-208ENST00000461071 PNPLA6Q8IY17 1366 aa26.33■■□□□ 1.8
SLC39A1-208ENST00000461071 C1orf167Q5SNV9 1468 aa26.32■■□□□ 1.8
SLC39A1-208ENST00000461071 RPGRIP1LQ68CZ1 1315 aa26.32■■□□□ 1.8
SLC39A1-208ENST00000461071 HFM1A2PYH4 1435 aa26.31■■□□□ 1.8
SLC39A1-208ENST00000461071 TRIM52Q96A61 297 aa26.31■■□□□ 1.8
SLC39A1-208ENST00000461071 AFF2P51816 1311 aa26.31■■□□□ 1.8
SLC39A1-208ENST00000461071 ROBO2Q9HCK4 1378 aa26.28■■□□□ 1.8
SLC39A1-208ENST00000461071 DDX17Q92841 729 aaKnown RBP26.26■■□□□ 1.79
SLC39A1-208ENST00000461071 SOS2Q07890 1332 aaPredicted RBP26.23■■□□□ 1.79
SLC39A1-208ENST00000461071 COL22A1Q8NFW1 1626 aaPredicted RBP26.21■■□□□ 1.79
SLC39A1-208ENST00000461071 C8orf37Q96NL8 207 aa26.21■■□□□ 1.79
SLC39A1-208ENST00000461071 RBM6P78332 1123 aaKnown RBP26.2■■□□□ 1.78
SLC39A1-208ENST00000461071 SLC4A1APQ9BWU0 796 aaKnown RBP26.2■■□□□ 1.78
SLC39A1-208ENST00000461071 QTRT2Q9H974 415 aaKnown RBP26.2■■□□□ 1.78
SLC39A1-208ENST00000461071 CDC42BPGQ6DT37 1551 aa26.19■■□□□ 1.78
SLC39A1-208ENST00000461071 ORAI2Q96SN7 254 aa26.18■■□□□ 1.78
SLC39A1-208ENST00000461071 IFT172Q9UG01 1749 aa26.18■■□□□ 1.78
SLC39A1-208ENST00000461071 RGS12O14924 1447 aa26.17■■□□□ 1.78
SLC39A1-208ENST00000461071 MARF1Q9Y4F3 1742 aaKnown RBP26.15■■□□□ 1.78
SLC39A1-208ENST00000461071 NGLY1Q96IV0 654 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms