RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 STRCP1A6NGW2 1772 aa13.58□□□□□ -0.23
SOX2-OT-202ENST00000461063 ALKQ9UM73 1620 aa13.58□□□□□ -0.24
SOX2-OT-202ENST00000461063 SLC52A1Q9NWF4 448 aa13.56□□□□□ -0.24
SOX2-OT-202ENST00000461063 SOCS7O14512 581 aa13.55□□□□□ -0.24
SOX2-OT-202ENST00000461063 RPRD2Q5VT52 1461 aaKnown RBP13.55□□□□□ -0.24
SOX2-OT-202ENST00000461063 KDM5AP29375 1690 aaKnown RBP13.54□□□□□ -0.24
SOX2-OT-202ENST00000461063 ADGRB3O60242 1522 aa13.54□□□□□ -0.24
SOX2-OT-202ENST00000461063 ROCK1Q13464 1354 aa13.53□□□□□ -0.24
SOX2-OT-202ENST00000461063 SLC26A8Q96RN1 970 aa13.52□□□□□ -0.25
SOX2-OT-202ENST00000461063 TET3O43151 1660 aa13.51□□□□□ -0.25
SOX2-OT-202ENST00000461063 UNC13BO14795 1591 aa13.5□□□□□ -0.25
SOX2-OT-202ENST00000461063 KCNA6P17658 529 aa13.5□□□□□ -0.25
SOX2-OT-202ENST00000461063 PPARGC1BQ86YN6 1023 aaKnown RBP13.5□□□□□ -0.25
SOX2-OT-202ENST00000461063 ZFYVE9O95405 1425 aa13.48□□□□□ -0.25
SOX2-OT-202ENST00000461063 TMEM94Q12767 1356 aa13.48□□□□□ -0.25
SOX2-OT-202ENST00000461063 ITGAEP38570 1179 aa13.48□□□□□ -0.25
SOX2-OT-202ENST00000461063 MED1Q15648 1581 aaPredicted RBP13.48□□□□□ -0.25
SOX2-OT-202ENST00000461063 BCANQ96GW7 911 aa13.47□□□□□ -0.25
SOX2-OT-202ENST00000461063 RIMS2Q9UQ26 1411 aa13.47□□□□□ -0.25
SOX2-OT-202ENST00000461063 PROSER2Q86WR7 435 aaPredicted RBP13.46□□□□□ -0.25
SOX2-OT-202ENST00000461063 U3KPZ7 1027 aaPredicted RBP13.46□□□□□ -0.25
SOX2-OT-202ENST00000461063 GCC2Q8IWJ2 1684 aa13.46□□□□□ -0.26
SOX2-OT-202ENST00000461063 XIRP1Q702N8 1843 aaKnown RBP13.46□□□□□ -0.26
SOX2-OT-202ENST00000461063 NUP155O75694 1391 aa13.45□□□□□ -0.26
SOX2-OT-202ENST00000461063 PLEKHG1Q9ULL1 1385 aa13.45□□□□□ -0.26
SOX2-OT-202ENST00000461063 HDGFP51858 240 aaKnown RBP13.45□□□□□ -0.26
SOX2-OT-202ENST00000461063 RBM33Q96EV2 1170 aaKnown RBP13.45□□□□□ -0.26
SOX2-OT-202ENST00000461063 TMEM131LA2VDJ0 1609 aa13.45□□□□□ -0.26
SOX2-OT-202ENST00000461063 IQGAP3Q86VI3 1631 aa13.45□□□□□ -0.26
SOX2-OT-202ENST00000461063 PPP1R15AO75807 674 aaPredicted RBP13.44□□□□□ -0.26
SOX2-OT-202ENST00000461063 CHGAP10645 457 aaKnown RBP13.44□□□□□ -0.26
SOX2-OT-202ENST00000461063 NWD1Q149M9 1564 aa13.44□□□□□ -0.26
SOX2-OT-202ENST00000461063 E9PCH4 1651 aa13.44□□□□□ -0.26
SOX2-OT-202ENST00000461063 NKTRP30414 1462 aaKnown RBP13.43□□□□□ -0.26
SOX2-OT-202ENST00000461063 FAM135BQ49AJ0 1406 aa13.43□□□□□ -0.26
SOX2-OT-202ENST00000461063 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.43□□□□□ -0.26
SOX2-OT-202ENST00000461063 NUTM2DQ5VT03 806 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-202ENST00000461063 TBX22Q9Y458 520 aa13.41□□□□□ -0.26
SOX2-OT-202ENST00000461063 ADAMTS13Q76LX8 1427 aa13.39□□□□□ -0.27
SOX2-OT-202ENST00000461063 MYO5BQ9ULV0 1848 aa13.39□□□□□ -0.27
SOX2-OT-202ENST00000461063 MSH6P52701 1360 aa13.38□□□□□ -0.27
SOX2-OT-202ENST00000461063 RRBP1Q9P2E9 1410 aaKnown RBP13.38□□□□□ -0.27
SOX2-OT-202ENST00000461063 SLAIN2Q9P270 581 aa13.37□□□□□ -0.27
SOX2-OT-202ENST00000461063 CHD2O14647 1828 aaKnown RBP13.36□□□□□ -0.27
SOX2-OT-202ENST00000461063 PIK3R4Q99570 1358 aa13.35□□□□□ -0.27
SOX2-OT-202ENST00000461063 ROBO1Q9Y6N7 1651 aa13.35□□□□□ -0.27
SOX2-OT-202ENST00000461063 NAIPQ13075 1403 aa13.35□□□□□ -0.27
SOX2-OT-202ENST00000461063 NCOA3Q9Y6Q9 1424 aa13.35□□□□□ -0.27
SOX2-OT-202ENST00000461063 DIP2AQ14689 1571 aa13.35□□□□□ -0.27
SOX2-OT-202ENST00000461063 SLC4A2P04920 1241 aa13.34□□□□□ -0.27
SOX2-OT-202ENST00000461063 RGS17Q9UGC6 210 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-202ENST00000461063 PTPRUQ92729 1446 aa13.32□□□□□ -0.28
SOX2-OT-202ENST00000461063 ZNF326Q5BKZ1 582 aaKnown RBP13.32□□□□□ -0.28
SOX2-OT-202ENST00000461063 C14orf37Q86TY3 774 aa13.32□□□□□ -0.28
SOX2-OT-202ENST00000461063 AMOTL2Q9Y2J4 779 aa13.32□□□□□ -0.28
SOX2-OT-202ENST00000461063 SPHKAPQ2M3C7 1700 aa13.31□□□□□ -0.28
SOX2-OT-202ENST00000461063 TRPM2O94759 1503 aa13.31□□□□□ -0.28
SOX2-OT-202ENST00000461063 C19orf44Q9H6X5 657 aa13.31□□□□□ -0.28
SOX2-OT-202ENST00000461063 SETBP1Q9Y6X0 1596 aa13.29□□□□□ -0.28
SOX2-OT-202ENST00000461063 CADPS2Q86UW7 1296 aa13.29□□□□□ -0.28
SOX2-OT-202ENST00000461063 SPINK5Q9NQ38 1064 aaPredicted RBP13.29□□□□□ -0.28
SOX2-OT-202ENST00000461063 HFM1A2PYH4 1435 aa13.29□□□□□ -0.28
SOX2-OT-202ENST00000461063 CLTCL1P53675 1640 aa13.28□□□□□ -0.28
SOX2-OT-202ENST00000461063 NRXN3Q9Y4C0 1643 aa13.28□□□□□ -0.28
SOX2-OT-202ENST00000461063 ATF3P18847 181 aa13.28□□□□□ -0.28
SOX2-OT-202ENST00000461063 TRIM52Q96A61 297 aa13.27□□□□□ -0.29
SOX2-OT-202ENST00000461063 METP08581 1390 aa13.27□□□□□ -0.29
SOX2-OT-202ENST00000461063 JCADQ9P266 1359 aa13.27□□□□□ -0.29
SOX2-OT-202ENST00000461063 PHLPP1O60346 1717 aa13.26□□□□□ -0.29
SOX2-OT-202ENST00000461063 NEXMIFQ5QGS0 1516 aa13.26□□□□□ -0.29
SOX2-OT-202ENST00000461063 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.26□□□□□ -0.29
SOX2-OT-202ENST00000461063 XRN1Q8IZH2 1706 aaKnown RBP13.25□□□□□ -0.29
SOX2-OT-202ENST00000461063 POTEAQ6S8J7 498 aa13.25□□□□□ -0.29
SOX2-OT-202ENST00000461063 COL16A1Q07092 1604 aaPredicted RBP13.24□□□□□ -0.29
SOX2-OT-202ENST00000461063 DCCP43146 1447 aa13.24□□□□□ -0.29
SOX2-OT-202ENST00000461063 BRINP3Q76B58 766 aa13.24□□□□□ -0.29
SOX2-OT-202ENST00000461063 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
SOX2-OT-202ENST00000461063 AHDC1Q5TGY3 1603 aaPredicted RBP13.23□□□□□ -0.29
SOX2-OT-202ENST00000461063 CAPN15O75808 1086 aa13.22□□□□□ -0.29
SOX2-OT-202ENST00000461063 VGFO15240 615 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-202ENST00000461063 MST1RQ04912 1400 aa13.21□□□□□ -0.3
SOX2-OT-202ENST00000461063 SPATA31A6Q5VVP1 1343 aa13.2□□□□□ -0.3
SOX2-OT-202ENST00000461063 RPGRIP1LQ68CZ1 1315 aa13.2□□□□□ -0.3
SOX2-OT-202ENST00000461063 ADGRL3Q9HAR2 1447 aa13.2□□□□□ -0.3
SOX2-OT-202ENST00000461063 LRP6O75581 1613 aa13.2□□□□□ -0.3
SOX2-OT-202ENST00000461063 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
SOX2-OT-202ENST00000461063 KIF1BO60333 1816 aa13.18□□□□□ -0.3
SOX2-OT-202ENST00000461063 PTCH1Q13635 1447 aa13.17□□□□□ -0.3
SOX2-OT-202ENST00000461063 ROBO2Q9HCK4 1378 aa13.17□□□□□ -0.3
SOX2-OT-202ENST00000461063 DSG3P32926 999 aa13.16□□□□□ -0.3
SOX2-OT-202ENST00000461063 MEX3CQ5U5Q3 659 aaKnown RBP13.16□□□□□ -0.3
SOX2-OT-202ENST00000461063 SHPRHQ149N8 1683 aa13.15□□□□□ -0.3
SOX2-OT-202ENST00000461063 PRAG1Q86YV5 1406 aa13.15□□□□□ -0.3
SOX2-OT-202ENST00000461063 SETD5Q9C0A6 1442 aa13.15□□□□□ -0.3
SOX2-OT-202ENST00000461063 MPHOSPH9Q99550 1183 aa13.15□□□□□ -0.3
SOX2-OT-202ENST00000461063 SETD1AO15047 1707 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-202ENST00000461063 NALCNQ8IZF0 1738 aa13.14□□□□□ -0.31
SOX2-OT-202ENST00000461063 DDX17Q92841 729 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-202ENST00000461063 CCDC144AA2RUR9 1427 aa13.13□□□□□ -0.31
SOX2-OT-202ENST00000461063 C1orf167Q5SNV9 1468 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms