RNA–Protein interactions for RNA: ENST00000460837.2

PTCD2-203, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,266 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-203ENST00000460837 TYW1BQ6NUM6 668 aa11.83□□□□□ -0.52
PTCD2-203ENST00000460837 PHF14O94880 888 aa11.82□□□□□ -0.52
PTCD2-203ENST00000460837 PROX2Q3B8N5 592 aa11.82□□□□□ -0.52
PTCD2-203ENST00000460837 FBXW7Q969H0 707 aa11.82□□□□□ -0.52
PTCD2-203ENST00000460837 CLASP1Q7Z460 1538 aa11.81□□□□□ -0.52
PTCD2-203ENST00000460837 COL9A1P20849 921 aa11.81□□□□□ -0.52
PTCD2-203ENST00000460837 KIAA0586Q9BVV6 1533 aa11.8□□□□□ -0.52
PTCD2-203ENST00000460837 IQGAP2Q13576 1575 aa11.79□□□□□ -0.52
PTCD2-203ENST00000460837 DPYSL4O14531 572 aa11.79□□□□□ -0.52
PTCD2-203ENST00000460837 RABGEF1Q9UJ41 708 aa11.79□□□□□ -0.52
PTCD2-203ENST00000460837 SHROOM2Q13796 1616 aa11.78□□□□□ -0.52
PTCD2-203ENST00000460837 CAMK2BQ13554 666 aa11.78□□□□□ -0.52
PTCD2-203ENST00000460837 TNIKQ9UKE5 1360 aa11.77□□□□□ -0.53
PTCD2-203ENST00000460837 EPAS1Q99814 870 aa11.75□□□□□ -0.53
PTCD2-203ENST00000460837 UBTFP17480 764 aaKnown RBP11.74□□□□□ -0.53
PTCD2-203ENST00000460837 C6orf132Q5T0Z8 1188 aa11.74□□□□□ -0.53
PTCD2-203ENST00000460837 ANKK1Q8NFD2 765 aa11.74□□□□□ -0.53
PTCD2-203ENST00000460837 KIAA1468Q9P260 1216 aa11.74□□□□□ -0.53
PTCD2-203ENST00000460837 UGGT2Q9NYU1 1516 aa11.74□□□□□ -0.53
PTCD2-203ENST00000460837 RBM33Q96EV2 1170 aaKnown RBP11.73□□□□□ -0.53
PTCD2-203ENST00000460837 SAMD9Q5K651 1589 aa11.72□□□□□ -0.53
PTCD2-203ENST00000460837 LOC105371045A0A1W2PR82 267 aa11.72□□□□□ -0.53
PTCD2-203ENST00000460837 IFFO2Q5TF58 517 aa11.72□□□□□ -0.53
PTCD2-203ENST00000460837 DDX12PQ92771 950 aa11.72□□□□□ -0.53
PTCD2-203ENST00000460837 EFCAB5A4FU69 1503 aa11.7□□□□□ -0.54
PTCD2-203ENST00000460837 NBR1Q14596 966 aa11.7□□□□□ -0.54
PTCD2-203ENST00000460837 LAPTM4BQ86VI4 370 aa11.7□□□□□ -0.54
PTCD2-203ENST00000460837 BCAMP50895 628 aa11.69□□□□□ -0.54
PTCD2-203ENST00000460837 KIAA0556O60303 1618 aa11.68□□□□□ -0.54
PTCD2-203ENST00000460837 ONECUT3O60422 494 aaPredicted RBP11.68□□□□□ -0.54
PTCD2-203ENST00000460837 ZFRQ96KR1 1074 aaKnown RBP11.68□□□□□ -0.54
PTCD2-203ENST00000460837 SEPT9Q9UHD8 586 aaPredicted RBP11.68□□□□□ -0.54
PTCD2-203ENST00000460837 DISP1Q96F81 1524 aa11.67□□□□□ -0.54
PTCD2-203ENST00000460837 A0A0G2JS52 829 aa11.66□□□□□ -0.54
PTCD2-203ENST00000460837 SOWAHBA6NEL2 793 aa11.66□□□□□ -0.54
PTCD2-203ENST00000460837 CEP162Q5TB80 1403 aa11.66□□□□□ -0.54
PTCD2-203ENST00000460837 TRIM6-TRIM34B2RNG4 842 aa11.65□□□□□ -0.54
PTCD2-203ENST00000460837 RGS20O76081 388 aa11.65□□□□□ -0.54
PTCD2-203ENST00000460837 CARMIL2Q6F5E8 1435 aa11.65□□□□□ -0.54
PTCD2-203ENST00000460837 PRG4Q92954 1404 aaPredicted RBP11.65□□□□□ -0.54
PTCD2-203ENST00000460837 ARHGAP35Q9NRY4 1499 aa11.64□□□□□ -0.55
PTCD2-203ENST00000460837 CLIP1P30622 1438 aa11.64□□□□□ -0.55
PTCD2-203ENST00000460837 ERCC6L2Q5T890 1561 aa11.63□□□□□ -0.55
PTCD2-203ENST00000460837 ARHGEF11O15085 1522 aa11.62□□□□□ -0.55
PTCD2-203ENST00000460837 RIMBP3CA6NJZ7 1639 aa11.62□□□□□ -0.55
PTCD2-203ENST00000460837 RIMBP3BA6NNM3 1639 aa11.62□□□□□ -0.55
PTCD2-203ENST00000460837 RIMBP3Q9UFD9 1639 aa11.62□□□□□ -0.55
PTCD2-203ENST00000460837 MAP3K7O43318 606 aa11.61□□□□□ -0.55
PTCD2-203ENST00000460837 WBP1LQ9NX94 342 aa11.61□□□□□ -0.55
PTCD2-203ENST00000460837 PDIA6Q15084 440 aa11.6□□□□□ -0.55
PTCD2-203ENST00000460837 FAM98CQ17RN3 349 aaKnown RBP11.6□□□□□ -0.55
PTCD2-203ENST00000460837 SPDYE16A6NNV3 312 aaPredicted RBP11.59□□□□□ -0.55
PTCD2-203ENST00000460837 ITGBL1O95965 494 aaPredicted RBP11.59□□□□□ -0.55
PTCD2-203ENST00000460837 EN1Q05925 392 aaPredicted RBP11.59□□□□□ -0.55
PTCD2-203ENST00000460837 TSR1Q2NL82 804 aaKnown RBP11.59□□□□□ -0.55
PTCD2-203ENST00000460837 ARAP1Q96P48 1450 aa11.58□□□□□ -0.56
PTCD2-203ENST00000460837 NYAP1Q6ZVC0 841 aa11.58□□□□□ -0.56
PTCD2-203ENST00000460837 PACS2Q86VP3 889 aa11.58□□□□□ -0.56
PTCD2-203ENST00000460837 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.57□□□□□ -0.56
PTCD2-203ENST00000460837 FHOD3Q2V2M9 1422 aa11.57□□□□□ -0.56
PTCD2-203ENST00000460837 RANGAP1P46060 587 aaPredicted RBP11.56□□□□□ -0.56
PTCD2-203ENST00000460837 E2F4Q16254 413 aa11.56□□□□□ -0.56
PTCD2-203ENST00000460837 FMN1Q68DA7 1419 aa11.56□□□□□ -0.56
PTCD2-203ENST00000460837 LRCH3Q96II8 777 aa11.56□□□□□ -0.56
PTCD2-203ENST00000460837 IRX2Q9BZI1 471 aaPredicted RBP11.56□□□□□ -0.56
PTCD2-203ENST00000460837 TSKSQ9UJT2 592 aa11.56□□□□□ -0.56
PTCD2-203ENST00000460837 WDR70Q9NW82 654 aa11.55□□□□□ -0.56
PTCD2-203ENST00000460837 HPS5Q9UPZ3 1129 aa11.55□□□□□ -0.56
PTCD2-203ENST00000460837 PTPRGP23470 1445 aa11.54□□□□□ -0.56
PTCD2-203ENST00000460837 RAPGEF6Q8TEU7 1601 aa11.54□□□□□ -0.56
PTCD2-203ENST00000460837 KCNC4Q03721 635 aa11.54□□□□□ -0.56
PTCD2-203ENST00000460837 TSR3Q9UJK0 312 aaKnown RBP11.54□□□□□ -0.56
PTCD2-203ENST00000460837 ABCA8O94911 1581 aa11.54□□□□□ -0.56
PTCD2-203ENST00000460837 GRXCR2A6NFK2 248 aa11.53□□□□□ -0.56
PTCD2-203ENST00000460837 P3H3Q8IVL6 736 aa11.53□□□□□ -0.56
PTCD2-203ENST00000460837 LRRIQ1Q96JM4 1722 aa11.52□□□□□ -0.57
PTCD2-203ENST00000460837 VPS8Q8N3P4 1428 aa11.52□□□□□ -0.57
PTCD2-203ENST00000460837 PCF11O94913 1555 aaKnown RBP11.51□□□□□ -0.57
PTCD2-203ENST00000460837 CDCA7LQ96GN5 454 aa11.51□□□□□ -0.57
PTCD2-203ENST00000460837 UHRF1BP1LA0JNW5 1464 aa11.51□□□□□ -0.57
PTCD2-203ENST00000460837 HECW1Q76N89 1606 aa11.5□□□□□ -0.57
PTCD2-203ENST00000460837 SMAPO00193 183 aa11.5□□□□□ -0.57
PTCD2-203ENST00000460837 CASKIN1Q8WXD9 1431 aa11.5□□□□□ -0.57
PTCD2-203ENST00000460837 FYCO1Q9BQS8 1478 aa11.5□□□□□ -0.57
PTCD2-203ENST00000460837 ABCC2Q92887 1545 aa11.5□□□□□ -0.57
PTCD2-203ENST00000460837 ADCY10Q96PN6 1610 aa11.49□□□□□ -0.57
PTCD2-203ENST00000460837 PRIM1P49642 420 aaKnown RBP11.49□□□□□ -0.57
PTCD2-203ENST00000460837 PRSS12P56730 875 aa11.49□□□□□ -0.57
PTCD2-203ENST00000460837 UACAQ9BZF9 1416 aa11.49□□□□□ -0.57
PTCD2-203ENST00000460837 PLB1Q6P1J6 1458 aa11.49□□□□□ -0.57
PTCD2-203ENST00000460837 PPP4CP60510 307 aa11.48□□□□□ -0.57
PTCD2-203ENST00000460837 CERKQ8TCT0 537 aa11.47□□□□□ -0.57
PTCD2-203ENST00000460837 FAM198AQ9UFP1 575 aa11.47□□□□□ -0.57
PTCD2-203ENST00000460837 ARIH1Q9Y4X5 557 aaPredicted RBP11.47□□□□□ -0.57
PTCD2-203ENST00000460837 NUP153P49790 1475 aaKnown RBP11.46□□□□□ -0.57
PTCD2-203ENST00000460837 CFAP43Q8NDM7 1665 aa11.46□□□□□ -0.58
PTCD2-203ENST00000460837 SAMD7Q7Z3H4 446 aa11.45□□□□□ -0.58
PTCD2-203ENST00000460837 ZCCHC11Q5TAX3 1644 aaKnown RBP11.45□□□□□ -0.58
PTCD2-203ENST00000460837 KDM5BQ9UGL1 1544 aa11.45□□□□□ -0.58
PTCD2-203ENST00000460837 CCDC18Q5T9S5 1454 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms