RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 IQGAP1P46940 1657 aa20.56■□□□□ 0.88
HDLBP-229ENST00000460826 SPATA31E1Q6ZUB1 1445 aa20.55■□□□□ 0.88
HDLBP-229ENST00000460826 NEXMIFQ5QGS0 1516 aa20.55■□□□□ 0.88
HDLBP-229ENST00000460826 NPHP4O75161 1426 aaPredicted RBP20.54■□□□□ 0.88
HDLBP-229ENST00000460826 ZNF326Q5BKZ1 582 aaKnown RBP20.54■□□□□ 0.88
HDLBP-229ENST00000460826 NUTM2DQ5VT03 806 aaPredicted RBP20.54■□□□□ 0.88
HDLBP-229ENST00000460826 PPLO60437 1756 aa20.54■□□□□ 0.88
HDLBP-229ENST00000460826 EID1Q9Y6B2 187 aa20.53■□□□□ 0.88
HDLBP-229ENST00000460826 IFT172Q9UG01 1749 aa20.51■□□□□ 0.87
HDLBP-229ENST00000460826 DMRT2Q9Y5R5 561 aa20.51■□□□□ 0.87
HDLBP-229ENST00000460826 RGL3Q3MIN7 710 aa20.49■□□□□ 0.87
HDLBP-229ENST00000460826 SENP3Q9H4L4 574 aaPredicted RBP20.49■□□□□ 0.87
HDLBP-229ENST00000460826 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.48■□□□□ 0.87
HDLBP-229ENST00000460826 PPP1R15AO75807 674 aaPredicted RBP20.47■□□□□ 0.87
HDLBP-229ENST00000460826 PLEKHG1Q9ULL1 1385 aa20.46■□□□□ 0.87
HDLBP-229ENST00000460826 HDGFP51858 240 aaKnown RBP20.46■□□□□ 0.87
HDLBP-229ENST00000460826 NRXN3Q9Y4C0 1643 aa20.45■□□□□ 0.87
HDLBP-229ENST00000460826 RPGRIP1LQ68CZ1 1315 aa20.45■□□□□ 0.86
HDLBP-229ENST00000460826 SIN3AQ96ST3 1273 aa20.44■□□□□ 0.86
HDLBP-229ENST00000460826 SLC26A8Q96RN1 970 aa20.42■□□□□ 0.86
HDLBP-229ENST00000460826 ADAMTS13Q76LX8 1427 aa20.42■□□□□ 0.86
HDLBP-229ENST00000460826 STRCP1A6NGW2 1772 aa20.41■□□□□ 0.86
HDLBP-229ENST00000460826 BCANQ96GW7 911 aa20.41■□□□□ 0.86
HDLBP-229ENST00000460826 ZNF335Q9H4Z2 1342 aaPredicted RBP20.41■□□□□ 0.86
HDLBP-229ENST00000460826 SETBP1Q9Y6X0 1596 aa20.41■□□□□ 0.86
HDLBP-229ENST00000460826 ADGRF5Q8IZF2 1346 aa20.39■□□□□ 0.85
HDLBP-229ENST00000460826 LTBP4Q8N2S1 1624 aa20.38■□□□□ 0.85
HDLBP-229ENST00000460826 VGFO15240 615 aaPredicted RBP20.38■□□□□ 0.85
HDLBP-229ENST00000460826 SETD1AO15047 1707 aaKnown RBP20.38■□□□□ 0.85
HDLBP-229ENST00000460826 NEUROD1Q13562 356 aa20.37■□□□□ 0.85
HDLBP-229ENST00000460826 DIP2AQ14689 1571 aa20.37■□□□□ 0.85
HDLBP-229ENST00000460826 CHD2O14647 1828 aaKnown RBP20.36■□□□□ 0.85
HDLBP-229ENST00000460826 MYOM2P54296 1465 aa20.36■□□□□ 0.85
HDLBP-229ENST00000460826 TBX22Q9Y458 520 aa20.34■□□□□ 0.85
HDLBP-229ENST00000460826 NRXN1Q9ULB1 1477 aa20.34■□□□□ 0.85
HDLBP-229ENST00000460826 ALKQ9UM73 1620 aa20.34■□□□□ 0.85
HDLBP-229ENST00000460826 DCAF11Q8TEB1 546 aa20.33■□□□□ 0.85
HDLBP-229ENST00000460826 KDM2AQ9Y2K7 1162 aa20.32■□□□□ 0.84
HDLBP-229ENST00000460826 PIK3C2GO75747 1445 aa20.32■□□□□ 0.84
HDLBP-229ENST00000460826 NWD1Q149M9 1564 aa20.31■□□□□ 0.84
HDLBP-229ENST00000460826 METP08581 1390 aa20.3■□□□□ 0.84
HDLBP-229ENST00000460826 PTPRUQ92729 1446 aa20.29■□□□□ 0.84
HDLBP-229ENST00000460826 L3MBTL2Q969R5 705 aa20.29■□□□□ 0.84
HDLBP-229ENST00000460826 KCNA6P17658 529 aa20.28■□□□□ 0.84
HDLBP-229ENST00000460826 CPS1P31327 1500 aa20.27■□□□□ 0.84
HDLBP-229ENST00000460826 ASXL1Q8IXJ9 1541 aa20.27■□□□□ 0.84
HDLBP-229ENST00000460826 XIRP1Q702N8 1843 aaKnown RBP20.27■□□□□ 0.84
HDLBP-229ENST00000460826 XRN1Q8IZH2 1706 aaKnown RBP20.27■□□□□ 0.83
HDLBP-229ENST00000460826 PIK3R4Q99570 1358 aa20.26■□□□□ 0.83
HDLBP-229ENST00000460826 CCER1Q8TC90 406 aaPredicted RBP20.26■□□□□ 0.83
HDLBP-229ENST00000460826 LAMC1P11047 1609 aa20.25■□□□□ 0.83
HDLBP-229ENST00000460826 LRRC7Q96NW7 1537 aa20.24■□□□□ 0.83
HDLBP-229ENST00000460826 CFAP70Q5T0N1 1121 aa20.24■□□□□ 0.83
HDLBP-229ENST00000460826 CLSPNQ9HAW4 1339 aa20.24■□□□□ 0.83
HDLBP-229ENST00000460826 CERKQ8TCT0 537 aa20.23■□□□□ 0.83
HDLBP-229ENST00000460826 STAC3Q96MF2 364 aa20.23■□□□□ 0.83
HDLBP-229ENST00000460826 C14orf93Q9H972 538 aaKnown RBP20.23■□□□□ 0.83
HDLBP-229ENST00000460826 NKTRP30414 1462 aaKnown RBP20.23■□□□□ 0.83
HDLBP-229ENST00000460826 PRAG1Q86YV5 1406 aa20.22■□□□□ 0.83
HDLBP-229ENST00000460826 AMOTL2Q9Y2J4 779 aa20.22■□□□□ 0.83
HDLBP-229ENST00000460826 TONSLQ96HA7 1378 aa20.21■□□□□ 0.83
HDLBP-229ENST00000460826 TMEM132EQ6IEE7 984 aa20.21■□□□□ 0.83
HDLBP-229ENST00000460826 KIAA1210Q9ULL0 1709 aa20.19■□□□□ 0.82
HDLBP-229ENST00000460826 RBM33Q96EV2 1170 aaKnown RBP20.19■□□□□ 0.82
HDLBP-229ENST00000460826 ADGRB1O14514 1584 aa20.19■□□□□ 0.82
HDLBP-229ENST00000460826 PROSER2Q86WR7 435 aaPredicted RBP20.18■□□□□ 0.82
HDLBP-229ENST00000460826 KNDC1Q76NI1 1749 aa20.17■□□□□ 0.82
HDLBP-229ENST00000460826 TMEM94Q12767 1356 aa20.17■□□□□ 0.82
HDLBP-229ENST00000460826 YTHDC2Q9H6S0 1430 aaKnown RBP20.16■□□□□ 0.82
HDLBP-229ENST00000460826 IQSEC2Q5JU85 1478 aa20.16■□□□□ 0.82
HDLBP-229ENST00000460826 TRPM1Q7Z4N2 1603 aa20.16■□□□□ 0.82
HDLBP-229ENST00000460826 LRPPRCP42704 1394 aaKnown RBP20.15■□□□□ 0.82
HDLBP-229ENST00000460826 ROBO2Q9HCK4 1378 aa20.14■□□□□ 0.81
HDLBP-229ENST00000460826 NBPF8Q3BBV2 869 aa20.14■□□□□ 0.81
HDLBP-229ENST00000460826 STK26Q9P289 416 aa20.14■□□□□ 0.81
HDLBP-229ENST00000460826 TECPR2O15040 1411 aa20.13■□□□□ 0.81
HDLBP-229ENST00000460826 PTCH1Q13635 1447 aa20.13■□□□□ 0.81
HDLBP-229ENST00000460826 NBPF1Q3BBV0 1214 aa20.12■□□□□ 0.81
HDLBP-229ENST00000460826 ABCC11Q96J66 1382 aa20.11■□□□□ 0.81
HDLBP-229ENST00000460826 NALCNQ8IZF0 1738 aa20.1■□□□□ 0.81
HDLBP-229ENST00000460826 ARHGEF28Q8N1W1 1705 aaKnown RBP20.08■□□□□ 0.81
HDLBP-229ENST00000460826 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.08■□□□□ 0.81
HDLBP-229ENST00000460826 PLEKHH1Q9ULM0 1364 aa20.08■□□□□ 0.8
HDLBP-229ENST00000460826 DLC1Q96QB1 1528 aa20.07■□□□□ 0.8
HDLBP-229ENST00000460826 WAPLQ7Z5K2 1190 aa20.07■□□□□ 0.8
HDLBP-229ENST00000460826 NCOA3Q9Y6Q9 1424 aa20.07■□□□□ 0.8
HDLBP-229ENST00000460826 TIMELESSQ9UNS1 1208 aa20.06■□□□□ 0.8
HDLBP-229ENST00000460826 TRAK1Q9UPV9 953 aa20.06■□□□□ 0.8
HDLBP-229ENST00000460826 ADGRL3Q9HAR2 1447 aa20.04■□□□□ 0.8
HDLBP-229ENST00000460826 C14orf37Q86TY3 774 aa20.04■□□□□ 0.8
HDLBP-229ENST00000460826 RALGAPBQ86X10 1494 aa20.04■□□□□ 0.8
HDLBP-229ENST00000460826 FAM135BQ49AJ0 1406 aa20.03■□□□□ 0.8
HDLBP-229ENST00000460826 UBAP1LF5GYI3 381 aa20.03■□□□□ 0.8
HDLBP-229ENST00000460826 MSH6P52701 1360 aa20.03■□□□□ 0.8
HDLBP-229ENST00000460826 SIRT1Q96EB6 747 aa20.02■□□□□ 0.8
HDLBP-229ENST00000460826 ROCK2O75116 1388 aaKnown RBP20.02■□□□□ 0.8
HDLBP-229ENST00000460826 GPRASP1Q5JY77 1395 aa20.01■□□□□ 0.79
HDLBP-229ENST00000460826 PRAM1Q96QH2 718 aa20.01■□□□□ 0.79
HDLBP-229ENST00000460826 SAFB2Q14151 953 aaKnown RBP eCLIP20■□□□□ 0.79
HDLBP-229ENST00000460826 C19orf44Q9H6X5 657 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms