RNA–Protein interactions for RNA: ENST00000460791.1

NXF3-203, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-203ENST00000460791 EID1Q9Y6B2 187 aa8.62□□□□□ -1.03
NXF3-203ENST00000460791 RIMS2Q9UQ26 1411 aa8.62□□□□□ -1.03
NXF3-203ENST00000460791 ANKRD30BQ9BXX2 1392 aa8.61□□□□□ -1.03
NXF3-203ENST00000460791 TMEM2Q9UHN6 1383 aa8.61□□□□□ -1.03
NXF3-203ENST00000460791 PPP1R15AO75807 674 aaPredicted RBP8.61□□□□□ -1.03
NXF3-203ENST00000460791 SIN3AQ96ST3 1273 aa8.61□□□□□ -1.03
NXF3-203ENST00000460791 KDM5AP29375 1690 aaKnown RBP8.61□□□□□ -1.03
NXF3-203ENST00000460791 CCDC144AA2RUR9 1427 aa8.61□□□□□ -1.03
NXF3-203ENST00000460791 NEURL4Q96JN8 1562 aa8.61□□□□□ -1.03
NXF3-203ENST00000460791 NEUROD1Q13562 356 aa8.6□□□□□ -1.03
NXF3-203ENST00000460791 SLC26A8Q96RN1 970 aa8.6□□□□□ -1.03
NXF3-203ENST00000460791 DMRT2Q9Y5R5 561 aa8.6□□□□□ -1.03
NXF3-203ENST00000460791 NPHP4O75161 1426 aaPredicted RBP8.6□□□□□ -1.03
NXF3-203ENST00000460791 SLIT1O75093 1534 aa8.59□□□□□ -1.03
NXF3-203ENST00000460791 IQGAP1P46940 1657 aa8.59□□□□□ -1.03
NXF3-203ENST00000460791 SCAF11Q99590 1463 aaKnown RBP8.59□□□□□ -1.03
NXF3-203ENST00000460791 ARHGAP23Q9P227 1491 aa8.59□□□□□ -1.03
NXF3-203ENST00000460791 KDM2AQ9Y2K7 1162 aa8.59□□□□□ -1.03
NXF3-203ENST00000460791 DHX57Q6P158 1386 aaKnown RBP8.59□□□□□ -1.03
NXF3-203ENST00000460791 PPLO60437 1756 aa8.58□□□□□ -1.04
NXF3-203ENST00000460791 ZFYVE9O95405 1425 aa8.58□□□□□ -1.04
NXF3-203ENST00000460791 HDGFP51858 240 aaKnown RBP8.58□□□□□ -1.04
NXF3-203ENST00000460791 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.58□□□□□ -1.04
NXF3-203ENST00000460791 ZNF335Q9H4Z2 1342 aaPredicted RBP8.57□□□□□ -1.04
NXF3-203ENST00000460791 SCAF1Q9H7N4 1312 aaKnown RBP8.57□□□□□ -1.04
NXF3-203ENST00000460791 STRCP1A6NGW2 1772 aa8.57□□□□□ -1.04
NXF3-203ENST00000460791 SPATA31E1Q6ZUB1 1445 aa8.56□□□□□ -1.04
NXF3-203ENST00000460791 NEXMIFQ5QGS0 1516 aa8.56□□□□□ -1.04
NXF3-203ENST00000460791 ADGRF5Q8IZF2 1346 aa8.55□□□□□ -1.04
NXF3-203ENST00000460791 IFT172Q9UG01 1749 aa8.55□□□□□ -1.04
NXF3-203ENST00000460791 VGFO15240 615 aaPredicted RBP8.55□□□□□ -1.04
NXF3-203ENST00000460791 MED14O60244 1454 aa8.55□□□□□ -1.04
NXF3-203ENST00000460791 CHD2O14647 1828 aaKnown RBP8.54□□□□□ -1.04
NXF3-203ENST00000460791 PLEKHG1Q9ULL1 1385 aa8.54□□□□□ -1.04
NXF3-203ENST00000460791 DCAF11Q8TEB1 546 aa8.54□□□□□ -1.04
NXF3-203ENST00000460791 RBM33Q96EV2 1170 aaKnown RBP8.54□□□□□ -1.04
NXF3-203ENST00000460791 RPGRIP1LQ68CZ1 1315 aa8.54□□□□□ -1.04
NXF3-203ENST00000460791 CCER1Q8TC90 406 aaPredicted RBP8.53□□□□□ -1.04
NXF3-203ENST00000460791 NRXN3Q9Y4C0 1643 aa8.52□□□□□ -1.05
NXF3-203ENST00000460791 TMEM132EQ6IEE7 984 aa8.52□□□□□ -1.05
NXF3-203ENST00000460791 TBX22Q9Y458 520 aa8.52□□□□□ -1.05
NXF3-203ENST00000460791 ADAMTS13Q76LX8 1427 aa8.52□□□□□ -1.05
NXF3-203ENST00000460791 LTBP4Q8N2S1 1624 aa8.51□□□□□ -1.05
NXF3-203ENST00000460791 CFAP70Q5T0N1 1121 aa8.51□□□□□ -1.05
NXF3-203ENST00000460791 PROSER2Q86WR7 435 aaPredicted RBP8.51□□□□□ -1.05
NXF3-203ENST00000460791 CERKQ8TCT0 537 aa8.51□□□□□ -1.05
NXF3-203ENST00000460791 L3MBTL2Q969R5 705 aa8.51□□□□□ -1.05
NXF3-203ENST00000460791 STK26Q9P289 416 aa8.51□□□□□ -1.05
NXF3-203ENST00000460791 XIRP1Q702N8 1843 aaKnown RBP8.51□□□□□ -1.05
NXF3-203ENST00000460791 ALKQ9UM73 1620 aa8.51□□□□□ -1.05
NXF3-203ENST00000460791 METP08581 1390 aa8.5□□□□□ -1.05
NXF3-203ENST00000460791 KCNA6P17658 529 aa8.5□□□□□ -1.05
NXF3-203ENST00000460791 AMOTL2Q9Y2J4 779 aa8.5□□□□□ -1.05
NXF3-203ENST00000460791 SETD1AO15047 1707 aaKnown RBP8.49□□□□□ -1.05
NXF3-203ENST00000460791 SETBP1Q9Y6X0 1596 aa8.49□□□□□ -1.05
NXF3-203ENST00000460791 PTPRUQ92729 1446 aa8.49□□□□□ -1.05
NXF3-203ENST00000460791 C14orf93Q9H972 538 aaKnown RBP8.48□□□□□ -1.05
NXF3-203ENST00000460791 C14orf37Q86TY3 774 aa8.47□□□□□ -1.05
NXF3-203ENST00000460791 LRRC7Q96NW7 1537 aa8.46□□□□□ -1.05
NXF3-203ENST00000460791 NBPF1Q3BBV0 1214 aa8.46□□□□□ -1.06
NXF3-203ENST00000460791 NBPF8Q3BBV2 869 aa8.46□□□□□ -1.06
NXF3-203ENST00000460791 DIP2AQ14689 1571 aa8.46□□□□□ -1.06
NXF3-203ENST00000460791 TMEM94Q12767 1356 aa8.46□□□□□ -1.06
NXF3-203ENST00000460791 TONSLQ96HA7 1378 aa8.46□□□□□ -1.06
NXF3-203ENST00000460791 PIK3C2GO75747 1445 aa8.46□□□□□ -1.06
NXF3-203ENST00000460791 MYOM2P54296 1465 aa8.45□□□□□ -1.06
NXF3-203ENST00000460791 UBAP1LF5GYI3 381 aa8.45□□□□□ -1.06
NXF3-203ENST00000460791 SAFB2Q14151 953 aaKnown RBP eCLIP8.45□□□□□ -1.06
NXF3-203ENST00000460791 WAPLQ7Z5K2 1190 aa8.45□□□□□ -1.06
NXF3-203ENST00000460791 CNKSR2Q8WXI2 1034 aa8.45□□□□□ -1.06
NXF3-203ENST00000460791 NRXN1Q9ULB1 1477 aa8.45□□□□□ -1.06
NXF3-203ENST00000460791 CPS1P31327 1500 aa8.44□□□□□ -1.06
NXF3-203ENST00000460791 XRN1Q8IZH2 1706 aaKnown RBP8.44□□□□□ -1.06
NXF3-203ENST00000460791 PIP4K2BP78356 416 aa8.44□□□□□ -1.06
NXF3-203ENST00000460791 TRAK1Q9UPV9 953 aa8.44□□□□□ -1.06
NXF3-203ENST00000460791 PIK3R4Q99570 1358 aa8.44□□□□□ -1.06
NXF3-203ENST00000460791 ROBO2Q9HCK4 1378 aa8.44□□□□□ -1.06
NXF3-203ENST00000460791 ASXL1Q8IXJ9 1541 aa8.44□□□□□ -1.06
NXF3-203ENST00000460791 NWD1Q149M9 1564 aa8.44□□□□□ -1.06
NXF3-203ENST00000460791 PRAG1Q86YV5 1406 aa8.43□□□□□ -1.06
NXF3-203ENST00000460791 YTHDC2Q9H6S0 1430 aaKnown RBP8.43□□□□□ -1.06
NXF3-203ENST00000460791 STAC3Q96MF2 364 aa8.42□□□□□ -1.06
NXF3-203ENST00000460791 LRPPRCP42704 1394 aaKnown RBP8.42□□□□□ -1.06
NXF3-203ENST00000460791 PLEKHH1Q9ULM0 1364 aa8.42□□□□□ -1.06
NXF3-203ENST00000460791 LAMC1P11047 1609 aa8.42□□□□□ -1.06
NXF3-203ENST00000460791 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.42□□□□□ -1.06
NXF3-203ENST00000460791 RGPD8O14715 1765 aaPredicted RBP8.42□□□□□ -1.06
NXF3-203ENST00000460791 KIAA1210Q9ULL0 1709 aa8.41□□□□□ -1.06
NXF3-203ENST00000460791 NKTRP30414 1462 aaKnown RBP8.41□□□□□ -1.06
NXF3-203ENST00000460791 ILDR1Q86SU0 546 aaPredicted RBP8.41□□□□□ -1.06
NXF3-203ENST00000460791 POGKQ9P215 609 aa8.41□□□□□ -1.06
NXF3-203ENST00000460791 TRPM1Q7Z4N2 1603 aa8.4□□□□□ -1.06
NXF3-203ENST00000460791 ABCC11Q96J66 1382 aa8.4□□□□□ -1.06
NXF3-203ENST00000460791 CLSPNQ9HAW4 1339 aa8.4□□□□□ -1.06
NXF3-203ENST00000460791 NUTM2FA1L443 756 aa8.4□□□□□ -1.06
NXF3-203ENST00000460791 TOM1O60784 492 aa8.4□□□□□ -1.06
NXF3-203ENST00000460791 FBXO41Q8TF61 875 aa8.4□□□□□ -1.06
NXF3-203ENST00000460791 PRAM1Q96QH2 718 aa8.4□□□□□ -1.06
NXF3-203ENST00000460791 KNDC1Q76NI1 1749 aa8.4□□□□□ -1.07
NXF3-203ENST00000460791 NALCNQ8IZF0 1738 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms