RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 DDRGK1Q96HY6 314 aa10.02□□□□□ -0.81
VBP1-202ENST00000460509 TMUB1Q9BVT8 246 aa10.02□□□□□ -0.81
VBP1-202ENST00000460509 SLC4A5Q9BY07 1137 aa10.02□□□□□ -0.81
VBP1-202ENST00000460509 DAXXQ9UER7 740 aaPredicted RBP10.01□□□□□ -0.81
VBP1-202ENST00000460509 DDX11L8A8MPP1 907 aa10□□□□□ -0.81
VBP1-202ENST00000460509 HDGFP51858 240 aaKnown RBP10□□□□□ -0.81
VBP1-202ENST00000460509 STAC3Q96MF2 364 aa10□□□□□ -0.81
VBP1-202ENST00000460509 NBPF3Q9H094 633 aa10□□□□□ -0.81
VBP1-202ENST00000460509 FAM217BQ9NTX9 383 aaPredicted RBP10□□□□□ -0.81
VBP1-202ENST00000460509 BEGAINQ9BUH8 593 aa9.99□□□□□ -0.81
VBP1-202ENST00000460509 TK2O00142 265 aa9.98□□□□□ -0.81
VBP1-202ENST00000460509 HRO43593 1189 aa9.98□□□□□ -0.81
VBP1-202ENST00000460509 TMEM134Q9H6X4 195 aa9.98□□□□□ -0.81
VBP1-202ENST00000460509 PLEKHG3A1L390 1219 aa9.97□□□□□ -0.81
VBP1-202ENST00000460509 FAM98CQ17RN3 349 aaKnown RBP9.97□□□□□ -0.81
VBP1-202ENST00000460509 MRPL50Q8N5N7 158 aaKnown RBP9.97□□□□□ -0.81
VBP1-202ENST00000460509 ATP1B4Q9UN42 357 aaPredicted RBP9.97□□□□□ -0.81
VBP1-202ENST00000460509 RNF40O75150 1001 aa9.96□□□□□ -0.82
VBP1-202ENST00000460509 SWT1Q5T5J6 900 aaKnown RBP9.96□□□□□ -0.82
VBP1-202ENST00000460509 RDH13Q8NBN7 331 aa9.96□□□□□ -0.82
VBP1-202ENST00000460509 SULF1Q8IWU6 871 aa9.95□□□□□ -0.82
VBP1-202ENST00000460509 GTF3C3Q9Y5Q9 886 aa9.95□□□□□ -0.82
VBP1-202ENST00000460509 GOLGA8CPA6NN73 597 aa9.94□□□□□ -0.82
VBP1-202ENST00000460509 BHMG1C9JSJ3 638 aaPredicted RBP9.93□□□□□ -0.82
VBP1-202ENST00000460509 SLC4A3P48751 1232 aa9.93□□□□□ -0.82
VBP1-202ENST00000460509 SAMD7Q7Z3H4 446 aa9.93□□□□□ -0.82
VBP1-202ENST00000460509 LAPTM4BQ86VI4 370 aa9.93□□□□□ -0.82
VBP1-202ENST00000460509 RSPH4AQ5TD94 716 aa9.92□□□□□ -0.82
VBP1-202ENST00000460509 ZFRQ96KR1 1074 aaKnown RBP9.92□□□□□ -0.82
VBP1-202ENST00000460509 HCSTQ9UBK5 93 aa9.91□□□□□ -0.82
VBP1-202ENST00000460509 CD46P15529 392 aa9.9□□□□□ -0.82
VBP1-202ENST00000460509 NUTM1Q86Y26 1132 aa9.9□□□□□ -0.82
VBP1-202ENST00000460509 KCTD12Q96CX2 325 aaKnown RBP9.9□□□□□ -0.82
VBP1-202ENST00000460509 SLF2Q8IX21 1173 aa9.89□□□□□ -0.83
VBP1-202ENST00000460509 RSPH6AQ9H0K4 717 aa9.89□□□□□ -0.83
VBP1-202ENST00000460509 POLR3EQ9NVU0 708 aa9.89□□□□□ -0.83
VBP1-202ENST00000460509 TBC1D2Q9BYX2 928 aa9.88□□□□□ -0.83
VBP1-202ENST00000460509 LRCH3Q96II8 777 aa9.87□□□□□ -0.83
VBP1-202ENST00000460509 PCMTD1Q96MG8 357 aaPredicted RBP9.87□□□□□ -0.83
VBP1-202ENST00000460509 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.87□□□□□ -0.83
VBP1-202ENST00000460509 SLC10A3P09131 477 aa9.86□□□□□ -0.83
VBP1-202ENST00000460509 ANKK1Q8NFD2 765 aa9.86□□□□□ -0.83
VBP1-202ENST00000460509 PLA2G2EQ9NZK7 142 aa9.86□□□□□ -0.83
VBP1-202ENST00000460509 DIXDC1Q155Q3 683 aa9.85□□□□□ -0.83
VBP1-202ENST00000460509 SH3D19Q5HYK7 790 aa9.85□□□□□ -0.83
VBP1-202ENST00000460509 SPIRE2Q8WWL2 714 aa9.85□□□□□ -0.83
VBP1-202ENST00000460509 MYSM1Q5VVJ2 828 aa9.84□□□□□ -0.83
VBP1-202ENST00000460509 WNT2BQ93097 391 aa9.84□□□□□ -0.83
VBP1-202ENST00000460509 KDM4AO75164 1064 aa9.83□□□□□ -0.84
VBP1-202ENST00000460509 GCGRP47871 477 aa9.83□□□□□ -0.84
VBP1-202ENST00000460509 SKIV2LQ15477 1246 aaKnown RBP9.83□□□□□ -0.84
VBP1-202ENST00000460509 GOPCQ9HD26 462 aa9.83□□□□□ -0.84
VBP1-202ENST00000460509 CFHP08603 1231 aa9.82□□□□□ -0.84
VBP1-202ENST00000460509 BCAMP50895 628 aa9.82□□□□□ -0.84
VBP1-202ENST00000460509 PROCA1Q8NCQ7 364 aaPredicted RBP9.82□□□□□ -0.84
VBP1-202ENST00000460509 CLK2P49760 499 aaKnown RBP9.81□□□□□ -0.84
VBP1-202ENST00000460509 PTPN5P54829 565 aa9.81□□□□□ -0.84
VBP1-202ENST00000460509 CSPP1Q1MSJ5 1256 aa9.81□□□□□ -0.84
VBP1-202ENST00000460509 RIC3Q7Z5B4 369 aa9.81□□□□□ -0.84
VBP1-202ENST00000460509 NDUFV2P19404 249 aa9.8□□□□□ -0.84
VBP1-202ENST00000460509 PPP4CP60510 307 aa9.8□□□□□ -0.84
VBP1-202ENST00000460509 HPS5Q9UPZ3 1129 aa9.8□□□□□ -0.84
VBP1-202ENST00000460509 SOWAHBA6NEL2 793 aa9.79□□□□□ -0.84
VBP1-202ENST00000460509 MOXD2PA6NHM9 499 aa9.79□□□□□ -0.84
VBP1-202ENST00000460509 KMT5BQ4FZB7 885 aa9.79□□□□□ -0.84
VBP1-202ENST00000460509 NECTIN2Q92692 538 aa9.78□□□□□ -0.84
VBP1-202ENST00000460509 LIMD1Q9UGP4 676 aa9.78□□□□□ -0.84
VBP1-202ENST00000460509 USP46P62068 366 aa9.77□□□□□ -0.85
VBP1-202ENST00000460509 FUT2Q10981 343 aa9.77□□□□□ -0.85
VBP1-202ENST00000460509 RSBN1LQ6PCB5 846 aaPredicted RBP9.76□□□□□ -0.85
VBP1-202ENST00000460509 TSR3Q9UJK0 312 aaKnown RBP9.76□□□□□ -0.85
VBP1-202ENST00000460509 HOXA2O43364 376 aa9.75□□□□□ -0.85
VBP1-202ENST00000460509 GUCA2AQ02747 115 aa9.75□□□□□ -0.85
VBP1-202ENST00000460509 GRIPAP1Q4V328 841 aa9.75□□□□□ -0.85
VBP1-202ENST00000460509 THSD4Q6ZMP0 1018 aa9.75□□□□□ -0.85
VBP1-202ENST00000460509 HLA-CQ95604 372 aa9.75□□□□□ -0.85
VBP1-202ENST00000460509 SPTLC1O15269 473 aa9.74□□□□□ -0.85
VBP1-202ENST00000460509 FDX1P10109 184 aa9.74□□□□□ -0.85
VBP1-202ENST00000460509 NUTM2BA6NNL0 878 aaPredicted RBP9.73□□□□□ -0.85
VBP1-202ENST00000460509 NUTM2EB1AL46 878 aaPredicted RBP9.73□□□□□ -0.85
VBP1-202ENST00000460509 ATP6V1AP38606 617 aa9.73□□□□□ -0.85
VBP1-202ENST00000460509 PUS10Q3MIT2 529 aaKnown RBP9.73□□□□□ -0.85
VBP1-202ENST00000460509 NUTM2DQ5VT03 806 aaPredicted RBP9.73□□□□□ -0.85
VBP1-202ENST00000460509 C14orf37Q86TY3 774 aa9.73□□□□□ -0.85
VBP1-202ENST00000460509 NUTM2AQ8IVF1 878 aaPredicted RBP9.73□□□□□ -0.85
VBP1-202ENST00000460509 WBP1LQ9NX94 342 aa9.73□□□□□ -0.85
VBP1-202ENST00000460509 PCDHB15Q9Y5E8 787 aa9.73□□□□□ -0.85
VBP1-202ENST00000460509 PRR14Q9BWN1 585 aa9.72□□□□□ -0.85
VBP1-202ENST00000460509 APLP1P51693 650 aa9.71□□□□□ -0.86
VBP1-202ENST00000460509 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.71□□□□□ -0.86
VBP1-202ENST00000460509 ACTN4O43707 911 aaKnown RBP9.7□□□□□ -0.86
VBP1-202ENST00000460509 QPCTQ16769 361 aa9.7□□□□□ -0.86
VBP1-202ENST00000460509 CABLES1Q8TDN4 633 aa9.7□□□□□ -0.86
VBP1-202ENST00000460509 C6orf229H3BNL8 230 aa9.69□□□□□ -0.86
VBP1-202ENST00000460509 PCDHGC3Q9UN70 934 aa9.69□□□□□ -0.86
VBP1-202ENST00000460509 TIMELESSQ9UNS1 1208 aa9.69□□□□□ -0.86
VBP1-202ENST00000460509 PCDHB3Q9Y5E6 796 aa9.69□□□□□ -0.86
VBP1-202ENST00000460509 GJA5P36382 358 aa9.68□□□□□ -0.86
VBP1-202ENST00000460509 ZBTB3Q9H5J0 574 aa9.68□□□□□ -0.86
VBP1-202ENST00000460509 RFC5P40937 340 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms