RNA–Protein interactions for RNA: ENST00000460500.1

SSX2IP-205, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 2,116 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-205ENST00000460500 MAP4K4O95819 1239 aaPredicted RBP7.05□□□□□ -1.28
SSX2IP-205ENST00000460500 TCF3P15923 654 aa7.05□□□□□ -1.28
SSX2IP-205ENST00000460500 RASEFQ8IZ41 740 aa7.05□□□□□ -1.28
SSX2IP-205ENST00000460500 GTF2E1P29083 439 aaPredicted RBP7.04□□□□□ -1.28
SSX2IP-205ENST00000460500 PDE4DQ08499 809 aa7.04□□□□□ -1.28
SSX2IP-205ENST00000460500 KRBA2Q6ZNG9 492 aa7.04□□□□□ -1.28
SSX2IP-205ENST00000460500 UBXN4Q92575 508 aa7.04□□□□□ -1.28
SSX2IP-205ENST00000460500 C8orf37Q96NL8 207 aa7.04□□□□□ -1.28
SSX2IP-205ENST00000460500 TRIM35Q9UPQ4 493 aa7.04□□□□□ -1.28
SSX2IP-205ENST00000460500 PLEKHG3A1L390 1219 aa7.03□□□□□ -1.28
SSX2IP-205ENST00000460500 CCER2I3L3R5 266 aa7.03□□□□□ -1.28
SSX2IP-205ENST00000460500 SMC5Q8IY18 1101 aa7.03□□□□□ -1.28
SSX2IP-205ENST00000460500 SLAIN1Q8ND83 568 aa7.03□□□□□ -1.28
SSX2IP-205ENST00000460500 SGIP1Q9BQI5 828 aa7.03□□□□□ -1.28
SSX2IP-205ENST00000460500 PPP1R1BQ9UD71 204 aaPredicted RBP7.03□□□□□ -1.28
SSX2IP-205ENST00000460500 PPP1R15AO75807 674 aaPredicted RBP7.03□□□□□ -1.28
SSX2IP-205ENST00000460500 MCM6Q14566 821 aa7.03□□□□□ -1.28
SSX2IP-205ENST00000460500 VGFO15240 615 aaPredicted RBP7.02□□□□□ -1.29
SSX2IP-205ENST00000460500 IVNS1ABPQ9Y6Y0 642 aa7.02□□□□□ -1.29
SSX2IP-205ENST00000460500 CREB3O43889 395 aa7.01□□□□□ -1.29
SSX2IP-205ENST00000460500 MMP14P50281 582 aa7.01□□□□□ -1.29
SSX2IP-205ENST00000460500 CNGB1Q14028 1251 aaPredicted RBP7.01□□□□□ -1.29
SSX2IP-205ENST00000460500 MIER1Q8N108 512 aa7.01□□□□□ -1.29
SSX2IP-205ENST00000460500 SDR16C5Q8N3Y7 309 aa7.01□□□□□ -1.29
SSX2IP-205ENST00000460500 TTC36A6NLP5 189 aa7.01□□□□□ -1.29
SSX2IP-205ENST00000460500 ZFYVE27Q5T4F4 411 aa7.01□□□□□ -1.29
SSX2IP-205ENST00000460500 CCDC181Q5TID7 509 aa7.01□□□□□ -1.29
SSX2IP-205ENST00000460500 TRIM41Q8WV44 630 aa7.01□□□□□ -1.29
SSX2IP-205ENST00000460500 CDCA7Q9BWT1 371 aaPredicted RBP7.01□□□□□ -1.29
SSX2IP-205ENST00000460500 KLHL42Q9P2K6 505 aa7.01□□□□□ -1.29
SSX2IP-205ENST00000460500 MAGEC2Q9UBF1 373 aaPredicted RBP7.01□□□□□ -1.29
SSX2IP-205ENST00000460500 TRIM66O15016 1216 aa7□□□□□ -1.29
SSX2IP-205ENST00000460500 NBPF11Q86T75 865 aa7□□□□□ -1.29
SSX2IP-205ENST00000460500 CIZ1Q9ULV3 898 aaPredicted RBP7□□□□□ -1.29
SSX2IP-205ENST00000460500 ARID4AP29374 1257 aaPredicted RBP7□□□□□ -1.29
SSX2IP-205ENST00000460500 MMRN1Q13201 1228 aa7□□□□□ -1.29
SSX2IP-205ENST00000460500 CASC1Q6TDU7 716 aa7□□□□□ -1.29
SSX2IP-205ENST00000460500 RNF25Q96BH1 459 aaPredicted RBP7□□□□□ -1.29
SSX2IP-205ENST00000460500 POM121Q96HA1 1249 aa7□□□□□ -1.29
SSX2IP-205ENST00000460500 PCDHB13Q9Y5F0 798 aa7□□□□□ -1.29
SSX2IP-205ENST00000460500 ACIN1Q9UKV3 1341 aaKnown RBP6.99□□□□□ -1.29
SSX2IP-205ENST00000460500 CALRP27797 417 aaKnown RBP6.99□□□□□ -1.29
SSX2IP-205ENST00000460500 NBPF1Q3BBV0 1214 aa6.99□□□□□ -1.29
SSX2IP-205ENST00000460500 AXDND1Q5T1B0 1012 aaPredicted RBP6.99□□□□□ -1.29
SSX2IP-205ENST00000460500 PNMA2Q9UL42 364 aa6.99□□□□□ -1.29
SSX2IP-205ENST00000460500 ANP32CO43423 234 aa6.98□□□□□ -1.29
SSX2IP-205ENST00000460500 SH3BP5O60239 455 aa6.98□□□□□ -1.29
SSX2IP-205ENST00000460500 CLEC4GQ6UXB4 293 aa6.98□□□□□ -1.29
SSX2IP-205ENST00000460500 TXNDC2Q86VQ3 553 aa6.98□□□□□ -1.29
SSX2IP-205ENST00000460500 ARHGEF1Q92888 912 aaKnown RBP6.98□□□□□ -1.29
SSX2IP-205ENST00000460500 EXOC5O00471 708 aa6.98□□□□□ -1.29
SSX2IP-205ENST00000460500 PAX3P23760 479 aa6.98□□□□□ -1.29
SSX2IP-205ENST00000460500 CDCA8Q53HL2 280 aa6.98□□□□□ -1.29
SSX2IP-205ENST00000460500 SPNS2Q8IVW8 549 aa6.98□□□□□ -1.29
SSX2IP-205ENST00000460500 GPATCH3Q96I76 525 aa6.98□□□□□ -1.29
SSX2IP-205ENST00000460500 STAC3Q96MF2 364 aa6.98□□□□□ -1.29
SSX2IP-205ENST00000460500 METTL14Q9HCE5 456 aaKnown RBP6.98□□□□□ -1.29
SSX2IP-205ENST00000460500 STK24Q9Y6E0 443 aa6.98□□□□□ -1.29
SSX2IP-205ENST00000460500 APLP1P51693 650 aa6.97□□□□□ -1.29
SSX2IP-205ENST00000460500 CCDC96Q2M329 555 aa6.97□□□□□ -1.29
SSX2IP-205ENST00000460500 WDR78Q5VTH9 848 aa6.97□□□□□ -1.29
SSX2IP-205ENST00000460500 RBM46Q8TBY0 533 aaKnown RBP6.97□□□□□ -1.29
SSX2IP-205ENST00000460500 MAF1Q9H063 256 aa6.97□□□□□ -1.29
SSX2IP-205ENST00000460500 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.97□□□□□ -1.29
SSX2IP-205ENST00000460500 CCDC194A0A1B0GVG4 234 aa6.97□□□□□ -1.29
SSX2IP-205ENST00000460500 LIG1P18858 919 aa6.97□□□□□ -1.29
SSX2IP-205ENST00000460500 KRI1Q8N9T8 703 aaKnown RBP6.97□□□□□ -1.29
SSX2IP-205ENST00000460500 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.97□□□□□ -1.29
SSX2IP-205ENST00000460500 VTI1AQ96AJ9 217 aa6.97□□□□□ -1.29
SSX2IP-205ENST00000460500 PARNO95453 639 aaKnown RBP6.96□□□□□ -1.3
SSX2IP-205ENST00000460500 SKIV2LQ15477 1246 aaKnown RBP6.96□□□□□ -1.3
SSX2IP-205ENST00000460500 CADPS2Q86UW7 1296 aa6.96□□□□□ -1.3
SSX2IP-205ENST00000460500 CACTIN-AS1Q8N1I8 211 aa6.96□□□□□ -1.3
SSX2IP-205ENST00000460500 PMM1Q92871 262 aa6.96□□□□□ -1.3
SSX2IP-205ENST00000460500 TMEM121BQ9BXQ6 578 aaPredicted RBP6.96□□□□□ -1.3
SSX2IP-205ENST00000460500 EIF3JO75822 258 aaKnown RBP6.95□□□□□ -1.3
SSX2IP-205ENST00000460500 PLCG2P16885 1265 aa6.95□□□□□ -1.3
SSX2IP-205ENST00000460500 ZC3H6P61129 1189 aaKnown RBP6.95□□□□□ -1.3
SSX2IP-205ENST00000460500 SH3BP1Q9Y3L3 701 aa6.95□□□□□ -1.3
SSX2IP-205ENST00000460500 KIF4AO95239 1232 aa6.95□□□□□ -1.3
SSX2IP-205ENST00000460500 IFNL1Q8IU54 200 aa6.95□□□□□ -1.3
SSX2IP-205ENST00000460500 DDRGK1Q96HY6 314 aa6.95□□□□□ -1.3
SSX2IP-205ENST00000460500 SPOCK3Q9BQ16 436 aa6.95□□□□□ -1.3
SSX2IP-205ENST00000460500 SSFA2P28290 1259 aa6.94□□□□□ -1.3
SSX2IP-205ENST00000460500 NBPF20Q3BBV1 942 aa6.94□□□□□ -1.3
SSX2IP-205ENST00000460500 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.94□□□□□ -1.3
SSX2IP-205ENST00000460500 SOX12O15370 315 aa6.94□□□□□ -1.3
SSX2IP-205ENST00000460500 IRX5P78411 483 aaPredicted RBP6.94□□□□□ -1.3
SSX2IP-205ENST00000460500 TMEM106CQ9BVX2 250 aa6.94□□□□□ -1.3
SSX2IP-205ENST00000460500 U2SURPO15042 1029 aaKnown RBP6.93□□□□□ -1.3
SSX2IP-205ENST00000460500 SF3A1Q15459 793 aaKnown RBP6.93□□□□□ -1.3
SSX2IP-205ENST00000460500 DPH6Q7L8W6 267 aa6.93□□□□□ -1.3
SSX2IP-205ENST00000460500 CXorf38Q8TB03 319 aa6.93□□□□□ -1.3
SSX2IP-205ENST00000460500 TSPAN18Q96SJ8 248 aa6.93□□□□□ -1.3
SSX2IP-205ENST00000460500 SBNO2Q9Y2G9 1366 aa6.93□□□□□ -1.3
SSX2IP-205ENST00000460500 EPB41L2O43491 1005 aaKnown RBP6.92□□□□□ -1.3
SSX2IP-205ENST00000460500 NRDCO43847 1150 aa6.92□□□□□ -1.3
SSX2IP-205ENST00000460500 SNPHO15079 494 aa6.92□□□□□ -1.3
SSX2IP-205ENST00000460500 NUBP1P53384 320 aa6.92□□□□□ -1.3
SSX2IP-205ENST00000460500 CEP120Q8N960 986 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms