RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 EID1Q9Y6B2 187 aa15.29■□□□□ 0.04
SYN3-205ENST00000459990 TMEM94Q12767 1356 aa15.28■□□□□ 0.04
SYN3-205ENST00000459990 SLC26A8Q96RN1 970 aa15.27■□□□□ 0.04
SYN3-205ENST00000459990 STAG3Q9UJ98 1225 aa15.27■□□□□ 0.04
SYN3-205ENST00000459990 RBM33Q96EV2 1170 aaKnown RBP15.26■□□□□ 0.03
SYN3-205ENST00000459990 RIMS2Q9UQ26 1411 aa15.25■□□□□ 0.03
SYN3-205ENST00000459990 ROCK1Q13464 1354 aa15.24■□□□□ 0.03
SYN3-205ENST00000459990 SPHKAPQ2M3C7 1700 aa15.24■□□□□ 0.03
SYN3-205ENST00000459990 PLEKHG1Q9ULL1 1385 aa15.24■□□□□ 0.03
SYN3-205ENST00000459990 KCNA6P17658 529 aa15.23■□□□□ 0.03
SYN3-205ENST00000459990 SLC52A1Q9NWF4 448 aa15.23■□□□□ 0.03
SYN3-205ENST00000459990 FAM135BQ49AJ0 1406 aa15.23■□□□□ 0.03
SYN3-205ENST00000459990 NRXN3Q9Y4C0 1643 aa15.22■□□□□ 0.03
SYN3-205ENST00000459990 ADAMTS13Q76LX8 1427 aa15.22■□□□□ 0.03
SYN3-205ENST00000459990 PHLPP1O60346 1717 aa15.21■□□□□ 0.03
SYN3-205ENST00000459990 DIP2AQ14689 1571 aa15.21■□□□□ 0.03
SYN3-205ENST00000459990 RGS17Q9UGC6 210 aaPredicted RBP15.2■□□□□ 0.02
SYN3-205ENST00000459990 COL16A1Q07092 1604 aaPredicted RBP15.19■□□□□ 0.02
SYN3-205ENST00000459990 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.19■□□□□ 0.02
SYN3-205ENST00000459990 PHF23Q9BUL5 403 aaPredicted RBP15.18■□□□□ 0.02
SYN3-205ENST00000459990 XRN1Q8IZH2 1706 aaKnown RBP15.17■□□□□ 0.02
SYN3-205ENST00000459990 PROSER2Q86WR7 435 aaPredicted RBP15.17■□□□□ 0.02
SYN3-205ENST00000459990 CLTCL1P53675 1640 aa15.17■□□□□ 0.02
SYN3-205ENST00000459990 MSH6P52701 1360 aa15.15■□□□□ 0.02
SYN3-205ENST00000459990 NUTM2DQ5VT03 806 aaPredicted RBP15.15■□□□□ 0.02
SYN3-205ENST00000459990 PPARGC1BQ86YN6 1023 aaKnown RBP15.15■□□□□ 0.02
SYN3-205ENST00000459990 PTPRUQ92729 1446 aa15.15■□□□□ 0.02
SYN3-205ENST00000459990 TRPM2O94759 1503 aa15.14■□□□□ 0.01
SYN3-205ENST00000459990 SETBP1Q9Y6X0 1596 aa15.14■□□□□ 0.01
SYN3-205ENST00000459990 SETD1AO15047 1707 aaKnown RBP15.14■□□□□ 0.01
SYN3-205ENST00000459990 NUP155O75694 1391 aa15.13■□□□□ 0.01
SYN3-205ENST00000459990 PPP1R15AO75807 674 aaPredicted RBP15.13■□□□□ 0.01
SYN3-205ENST00000459990 CHGAP10645 457 aaKnown RBP15.12■□□□□ 0.01
SYN3-205ENST00000459990 ITGAEP38570 1179 aa15.12■□□□□ 0.01
SYN3-205ENST00000459990 BCANQ96GW7 911 aa15.12■□□□□ 0.01
SYN3-205ENST00000459990 AHDC1Q5TGY3 1603 aaPredicted RBP15.12■□□□□ 0.01
SYN3-205ENST00000459990 NEXMIFQ5QGS0 1516 aa15.12■□□□□ 0.01
SYN3-205ENST00000459990 LRP6O75581 1613 aa15.1■□□□□ 0.01
SYN3-205ENST00000459990 RRBP1Q9P2E9 1410 aaKnown RBP15.1■□□□□ 0.01
SYN3-205ENST00000459990 SHPRHQ149N8 1683 aa15.1■□□□□ 0.01
SYN3-205ENST00000459990 NALCNQ8IZF0 1738 aa15.1■□□□□ 0.01
SYN3-205ENST00000459990 TBX22Q9Y458 520 aa15.1■□□□□ 0.01
SYN3-205ENST00000459990 KIF1BO60333 1816 aa15.09■□□□□ 0.01
SYN3-205ENST00000459990 PIK3R4Q99570 1358 aa15.09■□□□□ 0.01
SYN3-205ENST00000459990 NCOA3Q9Y6Q9 1424 aa15.09■□□□□ 0.01
SYN3-205ENST00000459990 SLAIN2Q9P270 581 aa15.08■□□□□ 0
SYN3-205ENST00000459990 NHSL1Q5SYE7 1610 aa15.07■□□□□ 0
SYN3-205ENST00000459990 POTEAQ6S8J7 498 aa15.07■□□□□ 0
SYN3-205ENST00000459990 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.07■□□□□ 0
SYN3-205ENST00000459990 NAIPQ13075 1403 aa15.07■□□□□ 0
SYN3-205ENST00000459990 ASXL1Q8IXJ9 1541 aa15.04■□□□□ -0
SYN3-205ENST00000459990 METP08581 1390 aa15.04■□□□□ -0
SYN3-205ENST00000459990 JCADQ9P266 1359 aa15.04■□□□□ -0
SYN3-205ENST00000459990 HDGFP51858 240 aaKnown RBP15.03■□□□□ -0
SYN3-205ENST00000459990 PPLO60437 1756 aa15.03■□□□□ -0
SYN3-205ENST00000459990 DCCP43146 1447 aa15.02■□□□□ -0
SYN3-205ENST00000459990 AMOTL2Q9Y2J4 779 aa15.02■□□□□ -0
SYN3-205ENST00000459990 MST1RQ04912 1400 aa15.01□□□□□ -0.01
SYN3-205ENST00000459990 C14orf37Q86TY3 774 aa14.99□□□□□ -0.01
SYN3-205ENST00000459990 C19orf44Q9H6X5 657 aa14.99□□□□□ -0.01
SYN3-205ENST00000459990 HFM1A2PYH4 1435 aa14.99□□□□□ -0.01
SYN3-205ENST00000459990 BRINP3Q76B58 766 aa14.98□□□□□ -0.01
SYN3-205ENST00000459990 CADPS2Q86UW7 1296 aa14.98□□□□□ -0.01
SYN3-205ENST00000459990 ADGRL3Q9HAR2 1447 aa14.98□□□□□ -0.01
SYN3-205ENST00000459990 IFT172Q9UG01 1749 aa14.97□□□□□ -0.01
SYN3-205ENST00000459990 LAMC1P11047 1609 aa14.97□□□□□ -0.01
SYN3-205ENST00000459990 ZNF326Q5BKZ1 582 aaKnown RBP14.96□□□□□ -0.01
SYN3-205ENST00000459990 ATF3P18847 181 aa14.95□□□□□ -0.02
SYN3-205ENST00000459990 SPATA31A6Q5VVP1 1343 aa14.94□□□□□ -0.02
SYN3-205ENST00000459990 PTCH1Q13635 1447 aa14.94□□□□□ -0.02
SYN3-205ENST00000459990 SETD5Q9C0A6 1442 aa14.94□□□□□ -0.02
SYN3-205ENST00000459990 PRAG1Q86YV5 1406 aa14.93□□□□□ -0.02
SYN3-205ENST00000459990 ROBO2Q9HCK4 1378 aa14.91□□□□□ -0.02
SYN3-205ENST00000459990 DDX17Q92841 729 aaKnown RBP14.91□□□□□ -0.02
SYN3-205ENST00000459990 C1orf167Q5SNV9 1468 aa14.9□□□□□ -0.02
SYN3-205ENST00000459990 PNPLA6Q8IY17 1366 aa14.88□□□□□ -0.03
SYN3-205ENST00000459990 CDC42BPGQ6DT37 1551 aa14.88□□□□□ -0.03
SYN3-205ENST00000459990 KNDC1Q76NI1 1749 aa14.88□□□□□ -0.03
SYN3-205ENST00000459990 FOXD1Q16676 465 aa14.87□□□□□ -0.03
SYN3-205ENST00000459990 COL22A1Q8NFW1 1626 aaPredicted RBP14.86□□□□□ -0.03
SYN3-205ENST00000459990 MEX3CQ5U5Q3 659 aaKnown RBP14.86□□□□□ -0.03
SYN3-205ENST00000459990 SPATA31E1Q6ZUB1 1445 aa14.85□□□□□ -0.03
SYN3-205ENST00000459990 NUTM2BA6NNL0 878 aaPredicted RBP14.85□□□□□ -0.03
SYN3-205ENST00000459990 NUTM2EB1AL46 878 aaPredicted RBP14.85□□□□□ -0.03
SYN3-205ENST00000459990 NUTM2AQ8IVF1 878 aaPredicted RBP14.85□□□□□ -0.03
SYN3-205ENST00000459990 TRIM52Q96A61 297 aa14.85□□□□□ -0.03
SYN3-205ENST00000459990 SLC4A1APQ9BWU0 796 aaKnown RBP14.85□□□□□ -0.03
SYN3-205ENST00000459990 MARF1Q9Y4F3 1742 aaKnown RBP14.83□□□□□ -0.03
SYN3-205ENST00000459990 CDK12Q9NYV4 1490 aaPredicted RBP14.82□□□□□ -0.04
SYN3-205ENST00000459990 ZNF772Q68DY9 489 aaPredicted RBP14.82□□□□□ -0.04
SYN3-205ENST00000459990 AFF2P51816 1311 aa14.82□□□□□ -0.04
SYN3-205ENST00000459990 RGS12O14924 1447 aa14.82□□□□□ -0.04
SYN3-205ENST00000459990 FMN2Q9NZ56 1722 aa14.81□□□□□ -0.04
SYN3-205ENST00000459990 VGFO15240 615 aaPredicted RBP14.81□□□□□ -0.04
SYN3-205ENST00000459990 ORAI2Q96SN7 254 aa14.81□□□□□ -0.04
SYN3-205ENST00000459990 RPGRIP1LQ68CZ1 1315 aa14.81□□□□□ -0.04
SYN3-205ENST00000459990 ADGRF5Q8IZF2 1346 aa14.81□□□□□ -0.04
SYN3-205ENST00000459990 TECPR2O15040 1411 aa14.81□□□□□ -0.04
SYN3-205ENST00000459990 PXDNQ92626 1479 aa14.81□□□□□ -0.04
SYN3-205ENST00000459990 CCDC144AA2RUR9 1427 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms