RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 CHD2O14647 1828 aaKnown RBP23.47■■□□□ 1.35
LMNA-209ENST00000459904 NUTM2DQ5VT03 806 aaPredicted RBP23.44■■□□□ 1.34
LMNA-209ENST00000459904 ANKRD50Q9ULJ7 1429 aa23.43■■□□□ 1.34
LMNA-209ENST00000459904 E9PCH4 1651 aa23.43■■□□□ 1.34
LMNA-209ENST00000459904 NWD1Q149M9 1564 aa23.43■■□□□ 1.34
LMNA-209ENST00000459904 TMEM131LA2VDJ0 1609 aa23.42■■□□□ 1.34
LMNA-209ENST00000459904 CHGAP10645 457 aaKnown RBP23.41■■□□□ 1.34
LMNA-209ENST00000459904 FAM135BQ49AJ0 1406 aa23.41■■□□□ 1.34
LMNA-209ENST00000459904 PHLPP1O60346 1717 aa23.4■■□□□ 1.34
LMNA-209ENST00000459904 PPARGC1BQ86YN6 1023 aaKnown RBP23.39■■□□□ 1.33
LMNA-209ENST00000459904 ZFYVE9O95405 1425 aa23.39■■□□□ 1.33
LMNA-209ENST00000459904 RIMS2Q9UQ26 1411 aa23.39■■□□□ 1.33
LMNA-209ENST00000459904 UNC13BO14795 1591 aa23.38■■□□□ 1.33
LMNA-209ENST00000459904 POTEAQ6S8J7 498 aa23.37■■□□□ 1.33
LMNA-209ENST00000459904 SLC52A1Q9NWF4 448 aa23.37■■□□□ 1.33
LMNA-209ENST00000459904 PPP1R15AO75807 674 aaPredicted RBP23.35■■□□□ 1.33
LMNA-209ENST00000459904 NKTRP30414 1462 aaKnown RBP23.35■■□□□ 1.33
LMNA-209ENST00000459904 SETD1AO15047 1707 aaKnown RBP23.34■■□□□ 1.33
LMNA-209ENST00000459904 ITGAEP38570 1179 aa23.34■■□□□ 1.33
LMNA-209ENST00000459904 RPRD2Q5VT52 1461 aaKnown RBP23.34■■□□□ 1.33
LMNA-209ENST00000459904 PLEKHG1Q9ULL1 1385 aa23.33■■□□□ 1.33
LMNA-209ENST00000459904 MSH6P52701 1360 aa23.32■■□□□ 1.32
LMNA-209ENST00000459904 SLAIN2Q9P270 581 aa23.3■■□□□ 1.32
LMNA-209ENST00000459904 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.3■■□□□ 1.32
LMNA-209ENST00000459904 IQGAP3Q86VI3 1631 aa23.3■■□□□ 1.32
LMNA-209ENST00000459904 ADAMTS13Q76LX8 1427 aa23.26■■□□□ 1.31
LMNA-209ENST00000459904 COL16A1Q07092 1604 aaPredicted RBP23.26■■□□□ 1.31
LMNA-209ENST00000459904 C14orf37Q86TY3 774 aa23.25■■□□□ 1.31
LMNA-209ENST00000459904 TBX22Q9Y458 520 aa23.23■■□□□ 1.31
LMNA-209ENST00000459904 PTPRUQ92729 1446 aa23.22■■□□□ 1.31
LMNA-209ENST00000459904 NUP155O75694 1391 aa23.21■■□□□ 1.31
LMNA-209ENST00000459904 SPHKAPQ2M3C7 1700 aa23.21■■□□□ 1.31
LMNA-209ENST00000459904 LRP6O75581 1613 aa23.19■■□□□ 1.3
LMNA-209ENST00000459904 NRXN3Q9Y4C0 1643 aa23.19■■□□□ 1.3
LMNA-209ENST00000459904 HDGFP51858 240 aaKnown RBP23.19■■□□□ 1.3
LMNA-209ENST00000459904 ROCK1Q13464 1354 aa23.18■■□□□ 1.3
LMNA-209ENST00000459904 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.18■■□□□ 1.3
LMNA-209ENST00000459904 JCADQ9P266 1359 aa23.17■■□□□ 1.3
LMNA-209ENST00000459904 DIP2AQ14689 1571 aa23.16■■□□□ 1.3
LMNA-209ENST00000459904 AMOTL2Q9Y2J4 779 aa23.16■■□□□ 1.3
LMNA-209ENST00000459904 TRPM2O94759 1503 aa23.15■■□□□ 1.3
LMNA-209ENST00000459904 SHPRHQ149N8 1683 aa23.12■■□□□ 1.29
LMNA-209ENST00000459904 AHDC1Q5TGY3 1603 aaPredicted RBP23.11■■□□□ 1.29
LMNA-209ENST00000459904 XRN1Q8IZH2 1706 aaKnown RBP23.11■■□□□ 1.29
LMNA-209ENST00000459904 ATF3P18847 181 aa23.11■■□□□ 1.29
LMNA-209ENST00000459904 CLTCL1P53675 1640 aa23.11■■□□□ 1.29
LMNA-209ENST00000459904 ZNF326Q5BKZ1 582 aaKnown RBP23.1■■□□□ 1.29
LMNA-209ENST00000459904 C19orf44Q9H6X5 657 aa23.1■■□□□ 1.29
LMNA-209ENST00000459904 NUTM2BA6NNL0 878 aaPredicted RBP23.09■■□□□ 1.29
LMNA-209ENST00000459904 NUTM2EB1AL46 878 aaPredicted RBP23.09■■□□□ 1.29
LMNA-209ENST00000459904 MEX3CQ5U5Q3 659 aaKnown RBP23.09■■□□□ 1.29
LMNA-209ENST00000459904 NUTM2AQ8IVF1 878 aaPredicted RBP23.09■■□□□ 1.29
LMNA-209ENST00000459904 NCOA3Q9Y6Q9 1424 aa23.08■■□□□ 1.29
LMNA-209ENST00000459904 BRINP3Q76B58 766 aa23.08■■□□□ 1.29
LMNA-209ENST00000459904 CADPS2Q86UW7 1296 aa23.08■■□□□ 1.29
LMNA-209ENST00000459904 DDX17Q92841 729 aaKnown RBP23.08■■□□□ 1.29
LMNA-209ENST00000459904 METP08581 1390 aa23.07■■□□□ 1.28
LMNA-209ENST00000459904 KIF1BO60333 1816 aa23.07■■□□□ 1.28
LMNA-209ENST00000459904 PIK3R4Q99570 1358 aa23.06■■□□□ 1.28
LMNA-209ENST00000459904 NALCNQ8IZF0 1738 aa23.06■■□□□ 1.28
LMNA-209ENST00000459904 TRIM52Q96A61 297 aa23.06■■□□□ 1.28
LMNA-209ENST00000459904 SETBP1Q9Y6X0 1596 aa23.06■■□□□ 1.28
LMNA-209ENST00000459904 NHSL1Q5SYE7 1610 aa23.03■■□□□ 1.28
LMNA-209ENST00000459904 NEXMIFQ5QGS0 1516 aa23.03■■□□□ 1.28
LMNA-209ENST00000459904 ASXL1Q8IXJ9 1541 aa23.03■■□□□ 1.28
LMNA-209ENST00000459904 SPATA31A6Q5VVP1 1343 aa23.02■■□□□ 1.28
LMNA-209ENST00000459904 MST1RQ04912 1400 aa23■■□□□ 1.27
LMNA-209ENST00000459904 ZNF772Q68DY9 489 aaPredicted RBP22.94■■□□□ 1.26
LMNA-209ENST00000459904 DCCP43146 1447 aa22.93■■□□□ 1.26
LMNA-209ENST00000459904 NAIPQ13075 1403 aa22.93■■□□□ 1.26
LMNA-209ENST00000459904 AFF2P51816 1311 aa22.93■■□□□ 1.26
LMNA-209ENST00000459904 UPF1Q92900 1129 aaKnown RBP eCLIP22.92■■□□□ 1.26
LMNA-209ENST00000459904 ADGRL3Q9HAR2 1447 aa22.91■■□□□ 1.26
LMNA-209ENST00000459904 PPLO60437 1756 aa22.9■■□□□ 1.26
LMNA-209ENST00000459904 SETD5Q9C0A6 1442 aa22.9■■□□□ 1.26
LMNA-209ENST00000459904 RXRBP28702 533 aa22.89■■□□□ 1.25
LMNA-209ENST00000459904 C8orf37Q96NL8 207 aa22.88■■□□□ 1.25
LMNA-209ENST00000459904 RRBP1Q9P2E9 1410 aaKnown RBP22.88■■□□□ 1.25
LMNA-209ENST00000459904 FOXD1Q16676 465 aa22.87■■□□□ 1.25
LMNA-209ENST00000459904 PNPLA6Q8IY17 1366 aa22.87■■□□□ 1.25
LMNA-209ENST00000459904 ROBO2Q9HCK4 1378 aa22.87■■□□□ 1.25
LMNA-209ENST00000459904 ORAI2Q96SN7 254 aa22.86■■□□□ 1.25
LMNA-209ENST00000459904 C1orf167Q5SNV9 1468 aa22.85■■□□□ 1.25
LMNA-209ENST00000459904 ADAMTS2O95450 1211 aa22.85■■□□□ 1.25
LMNA-209ENST00000459904 LRRC59Q96AG4 307 aaKnown RBP22.84■■□□□ 1.25
LMNA-209ENST00000459904 SLC4A1APQ9BWU0 796 aaKnown RBP22.8■■□□□ 1.24
LMNA-209ENST00000459904 QTRT2Q9H974 415 aaKnown RBP22.8■■□□□ 1.24
LMNA-209ENST00000459904 RGS12O14924 1447 aa22.8■■□□□ 1.24
LMNA-209ENST00000459904 LAMC1P11047 1609 aa22.79■■□□□ 1.24
LMNA-209ENST00000459904 PTCH1Q13635 1447 aa22.77■■□□□ 1.24
LMNA-209ENST00000459904 VGFO15240 615 aaPredicted RBP22.77■■□□□ 1.24
LMNA-209ENST00000459904 NGLY1Q96IV0 654 aa22.76■■□□□ 1.23
LMNA-209ENST00000459904 NUTM2FA1L443 756 aa22.75■■□□□ 1.23
LMNA-209ENST00000459904 XPCQ01831 940 aaPredicted RBP22.75■■□□□ 1.23
LMNA-209ENST00000459904 HFM1A2PYH4 1435 aa22.74■■□□□ 1.23
LMNA-209ENST00000459904 CDK12Q9NYV4 1490 aaPredicted RBP22.74■■□□□ 1.23
LMNA-209ENST00000459904 RGL3Q3MIN7 710 aa22.74■■□□□ 1.23
LMNA-209ENST00000459904 ADGRF5Q8IZF2 1346 aa22.74■■□□□ 1.23
LMNA-209ENST00000459904 STK26Q9P289 416 aa22.73■■□□□ 1.23
LMNA-209ENST00000459904 IFT172Q9UG01 1749 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 1159.1 ms