RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 MS4A1P11836 297 aa13.7□□□□□ -0.22
CKAP2-204ENST00000459902 SSTR3P32745 418 aaPredicted RBP13.7□□□□□ -0.22
CKAP2-204ENST00000459902 FAM217BQ9NTX9 383 aaPredicted RBP13.7□□□□□ -0.22
CKAP2-204ENST00000459902 FAM117AQ9C073 453 aa13.68□□□□□ -0.22
CKAP2-204ENST00000459902 SWT1Q5T5J6 900 aaKnown RBP13.67□□□□□ -0.22
CKAP2-204ENST00000459902 IL27Q8NEV9 243 aa13.66□□□□□ -0.22
CKAP2-204ENST00000459902 ZFRQ96KR1 1074 aaKnown RBP13.66□□□□□ -0.22
CKAP2-204ENST00000459902 STAC3Q96MF2 364 aa13.66□□□□□ -0.22
CKAP2-204ENST00000459902 SAMD7Q7Z3H4 446 aa13.64□□□□□ -0.23
CKAP2-204ENST00000459902 HDGFP51858 240 aaKnown RBP13.63□□□□□ -0.23
CKAP2-204ENST00000459902 DDX11L8A8MPP1 907 aa13.62□□□□□ -0.23
CKAP2-204ENST00000459902 PLEKHG3A1L390 1219 aa13.61□□□□□ -0.23
CKAP2-204ENST00000459902 TMEM132AQ24JP5 1023 aa13.61□□□□□ -0.23
CKAP2-204ENST00000459902 SULF1Q8IWU6 871 aa13.61□□□□□ -0.23
CKAP2-204ENST00000459902 DDRGK1Q96HY6 314 aa13.61□□□□□ -0.23
CKAP2-204ENST00000459902 BEGAINQ9BUH8 593 aa13.6□□□□□ -0.23
CKAP2-204ENST00000459902 GOLGA8CPA6NN73 597 aa13.59□□□□□ -0.23
CKAP2-204ENST00000459902 CD46P15529 392 aa13.59□□□□□ -0.23
CKAP2-204ENST00000459902 SLC10A3P09131 477 aa13.57□□□□□ -0.24
CKAP2-204ENST00000459902 SLF2Q8IX21 1173 aa13.56□□□□□ -0.24
CKAP2-204ENST00000459902 RDH13Q8NBN7 331 aa13.56□□□□□ -0.24
CKAP2-204ENST00000459902 ANKK1Q8NFD2 765 aa13.55□□□□□ -0.24
CKAP2-204ENST00000459902 LRCH3Q96II8 777 aa13.55□□□□□ -0.24
CKAP2-204ENST00000459902 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.55□□□□□ -0.24
CKAP2-204ENST00000459902 WNT2BQ93097 391 aa13.54□□□□□ -0.24
CKAP2-204ENST00000459902 SLC4A3P48751 1232 aa13.53□□□□□ -0.24
CKAP2-204ENST00000459902 RSPH4AQ5TD94 716 aa13.53□□□□□ -0.24
CKAP2-204ENST00000459902 SOWAHBA6NEL2 793 aa13.52□□□□□ -0.25
CKAP2-204ENST00000459902 RNF40O75150 1001 aa13.52□□□□□ -0.25
CKAP2-204ENST00000459902 PCDH10Q9P2E7 1040 aa13.52□□□□□ -0.25
CKAP2-204ENST00000459902 BCAMP50895 628 aa13.51□□□□□ -0.25
CKAP2-204ENST00000459902 GCGRP47871 477 aa13.5□□□□□ -0.25
CKAP2-204ENST00000459902 SPIRE2Q8WWL2 714 aa13.47□□□□□ -0.25
CKAP2-204ENST00000459902 KCTD12Q96CX2 325 aaKnown RBP13.47□□□□□ -0.25
CKAP2-204ENST00000459902 TBC1D2Q9BYX2 928 aa13.47□□□□□ -0.25
CKAP2-204ENST00000459902 HPS5Q9UPZ3 1129 aa13.46□□□□□ -0.25
CKAP2-204ENST00000459902 CFHP08603 1231 aa13.45□□□□□ -0.26
CKAP2-204ENST00000459902 PPP4CP60510 307 aa13.45□□□□□ -0.26
CKAP2-204ENST00000459902 THSD4Q6ZMP0 1018 aa13.45□□□□□ -0.26
CKAP2-204ENST00000459902 NUTM1Q86Y26 1132 aa13.45□□□□□ -0.26
CKAP2-204ENST00000459902 TSR3Q9UJK0 312 aaKnown RBP13.45□□□□□ -0.26
CKAP2-204ENST00000459902 KDM4AO75164 1064 aa13.44□□□□□ -0.26
CKAP2-204ENST00000459902 RSPH6AQ9H0K4 717 aa13.44□□□□□ -0.26
CKAP2-204ENST00000459902 SH3D19Q5HYK7 790 aa13.43□□□□□ -0.26
CKAP2-204ENST00000459902 MYSM1Q5VVJ2 828 aa13.43□□□□□ -0.26
CKAP2-204ENST00000459902 GOPCQ9HD26 462 aa13.43□□□□□ -0.26
CKAP2-204ENST00000459902 DIXDC1Q155Q3 683 aa13.42□□□□□ -0.26
CKAP2-204ENST00000459902 NECTIN2Q92692 538 aa13.42□□□□□ -0.26
CKAP2-204ENST00000459902 MYT1LQ9UL68 1186 aa13.42□□□□□ -0.26
CKAP2-204ENST00000459902 SKIV2LQ15477 1246 aaKnown RBP13.41□□□□□ -0.26
CKAP2-204ENST00000459902 SPNS2Q8IVW8 549 aa13.41□□□□□ -0.26
CKAP2-204ENST00000459902 WBP1LQ9NX94 342 aa13.41□□□□□ -0.26
CKAP2-204ENST00000459902 POLR3EQ9NVU0 708 aa13.4□□□□□ -0.26
CKAP2-204ENST00000459902 KMT5BQ4FZB7 885 aa13.39□□□□□ -0.27
CKAP2-204ENST00000459902 MOXD2PA6NHM9 499 aa13.38□□□□□ -0.27
CKAP2-204ENST00000459902 USP46P62068 366 aa13.38□□□□□ -0.27
CKAP2-204ENST00000459902 FUT2Q10981 343 aa13.38□□□□□ -0.27
CKAP2-204ENST00000459902 ACTN4O43707 911 aaKnown RBP13.37□□□□□ -0.27
CKAP2-204ENST00000459902 NDUFV2P19404 249 aa13.37□□□□□ -0.27
CKAP2-204ENST00000459902 APLP1P51693 650 aa13.37□□□□□ -0.27
CKAP2-204ENST00000459902 HOXA2O43364 376 aa13.36□□□□□ -0.27
CKAP2-204ENST00000459902 RIC3Q7Z5B4 369 aa13.36□□□□□ -0.27
CKAP2-204ENST00000459902 PROCA1Q8NCQ7 364 aaPredicted RBP13.36□□□□□ -0.27
CKAP2-204ENST00000459902 PTPN5P54829 565 aa13.35□□□□□ -0.27
CKAP2-204ENST00000459902 LIMD1Q9UGP4 676 aa13.35□□□□□ -0.27
CKAP2-204ENST00000459902 SPTLC1O15269 473 aa13.34□□□□□ -0.27
CKAP2-204ENST00000459902 ATP6V1AP38606 617 aa13.34□□□□□ -0.27
CKAP2-204ENST00000459902 CLK2P49760 499 aaKnown RBP13.34□□□□□ -0.27
CKAP2-204ENST00000459902 RSBN1LQ6PCB5 846 aaPredicted RBP13.34□□□□□ -0.27
CKAP2-204ENST00000459902 HLA-CQ95604 372 aa13.34□□□□□ -0.27
CKAP2-204ENST00000459902 PCMTD1Q96MG8 357 aaPredicted RBP13.34□□□□□ -0.27
CKAP2-204ENST00000459902 PRR14Q9BWN1 585 aa13.34□□□□□ -0.27
CKAP2-204ENST00000459902 GJA5P36382 358 aa13.31□□□□□ -0.28
CKAP2-204ENST00000459902 GUCA2AQ02747 115 aa13.31□□□□□ -0.28
CKAP2-204ENST00000459902 PUS10Q3MIT2 529 aaKnown RBP13.31□□□□□ -0.28
CKAP2-204ENST00000459902 GRIPAP1Q4V328 841 aa13.31□□□□□ -0.28
CKAP2-204ENST00000459902 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.31□□□□□ -0.28
CKAP2-204ENST00000459902 PCDHB15Q9Y5E8 787 aa13.31□□□□□ -0.28
CKAP2-204ENST00000459902 ATP1B4Q9UN42 357 aaPredicted RBP13.3□□□□□ -0.28
CKAP2-204ENST00000459902 FDX1P10109 184 aa13.29□□□□□ -0.28
CKAP2-204ENST00000459902 MORN1Q5T089 497 aa13.29□□□□□ -0.28
CKAP2-204ENST00000459902 RNF166Q96A37 237 aaPredicted RBP13.29□□□□□ -0.28
CKAP2-204ENST00000459902 PCDHGC3Q9UN70 934 aa13.29□□□□□ -0.28
CKAP2-204ENST00000459902 GTF3C3Q9Y5Q9 886 aa13.29□□□□□ -0.28
CKAP2-204ENST00000459902 TUSC1Q2TAM9 212 aa13.28□□□□□ -0.28
CKAP2-204ENST00000459902 NYAP1Q6ZVC0 841 aa13.28□□□□□ -0.28
CKAP2-204ENST00000459902 PCDHB3Q9Y5E6 796 aa13.28□□□□□ -0.28
CKAP2-204ENST00000459902 CSPP1Q1MSJ5 1256 aa13.27□□□□□ -0.29
CKAP2-204ENST00000459902 SLC27A5Q9Y2P5 690 aa13.26□□□□□ -0.29
CKAP2-204ENST00000459902 FBXO31Q5XUX0 539 aaPredicted RBP13.25□□□□□ -0.29
CKAP2-204ENST00000459902 QPCTQ16769 361 aa13.24□□□□□ -0.29
CKAP2-204ENST00000459902 BLOC1S3Q6QNY0 202 aa13.23□□□□□ -0.29
CKAP2-204ENST00000459902 LILRB3O75022 631 aa13.22□□□□□ -0.29
CKAP2-204ENST00000459902 SCUBE3Q8IX30 993 aa13.22□□□□□ -0.29
CKAP2-204ENST00000459902 HCSTQ9UBK5 93 aa13.22□□□□□ -0.29
CKAP2-204ENST00000459902 HRCP23327 699 aa13.21□□□□□ -0.29
CKAP2-204ENST00000459902 MMRN1Q13201 1228 aa13.21□□□□□ -0.29
CKAP2-204ENST00000459902 PRPF38BQ5VTL8 546 aaKnown RBP13.21□□□□□ -0.29
CKAP2-204ENST00000459902 CABLES1Q8TDN4 633 aa13.21□□□□□ -0.29
CKAP2-204ENST00000459902 COPS2P61201 443 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms