RNA–Protein interactions for RNA: ENST00000458511.6

TRAPPC2-204, Transcript of trafficking protein particle complex 2, humanhuman

TSL 5 BASIC

Gene TRAPPC2, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-204ENST00000458511 PBRM1Q86U86 1689 aa8.43□□□□□ -1.06
TRAPPC2-204ENST00000458511 PROX2Q3B8N5 592 aa8.43□□□□□ -1.06
TRAPPC2-204ENST00000458511 MRPL50Q8N5N7 158 aaKnown RBP8.43□□□□□ -1.06
TRAPPC2-204ENST00000458511 JPH4Q96JJ6 628 aa8.43□□□□□ -1.06
TRAPPC2-204ENST00000458511 A0A0G2JS52 829 aa8.42□□□□□ -1.06
TRAPPC2-204ENST00000458511 COL9A1P20849 921 aa8.42□□□□□ -1.06
TRAPPC2-204ENST00000458511 ZDHHC16Q969W1 377 aa8.42□□□□□ -1.06
TRAPPC2-204ENST00000458511 LARP6Q9BRS8 491 aaKnown RBP8.42□□□□□ -1.06
TRAPPC2-204ENST00000458511 EMILIN3Q9NT22 766 aa8.42□□□□□ -1.06
TRAPPC2-204ENST00000458511 CTTNBP2Q8WZ74 1663 aa8.42□□□□□ -1.06
TRAPPC2-204ENST00000458511 RAPGEF2Q9Y4G8 1499 aa8.41□□□□□ -1.06
TRAPPC2-204ENST00000458511 GOLGA8CPA6NN73 597 aa8.41□□□□□ -1.06
TRAPPC2-204ENST00000458511 RAD54L2Q9Y4B4 1467 aa8.4□□□□□ -1.06
TRAPPC2-204ENST00000458511 CEP162Q5TB80 1403 aa8.4□□□□□ -1.06
TRAPPC2-204ENST00000458511 IGF1RP08069 1367 aa8.4□□□□□ -1.06
TRAPPC2-204ENST00000458511 BARGINQ6ZT62 677 aa8.4□□□□□ -1.06
TRAPPC2-204ENST00000458511 IL27Q8NEV9 243 aa8.4□□□□□ -1.06
TRAPPC2-204ENST00000458511 PDE4AP27815 886 aa8.39□□□□□ -1.07
TRAPPC2-204ENST00000458511 IFFO2Q5TF58 517 aa8.39□□□□□ -1.07
TRAPPC2-204ENST00000458511 C1orf115Q9H7X2 142 aa8.39□□□□□ -1.07
TRAPPC2-204ENST00000458511 PCDHGA10Q9Y5H3 936 aa8.39□□□□□ -1.07
TRAPPC2-204ENST00000458511 IFT140Q96RY7 1462 aa8.38□□□□□ -1.07
TRAPPC2-204ENST00000458511 BCAMP50895 628 aa8.38□□□□□ -1.07
TRAPPC2-204ENST00000458511 IRX2Q9BZI1 471 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC2-204ENST00000458511 GAPVD1Q14C86 1478 aa8.37□□□□□ -1.07
TRAPPC2-204ENST00000458511 CARMIL1Q5VZK9 1371 aa8.36□□□□□ -1.07
TRAPPC2-204ENST00000458511 MAP3K9P80192 1104 aa8.36□□□□□ -1.07
TRAPPC2-204ENST00000458511 AK7Q96M32 723 aa8.36□□□□□ -1.07
TRAPPC2-204ENST00000458511 KDM4CQ9H3R0 1056 aa8.36□□□□□ -1.07
TRAPPC2-204ENST00000458511 SMYD5Q6GMV2 418 aa8.35□□□□□ -1.07
TRAPPC2-204ENST00000458511 DDX27Q96GQ7 796 aaKnown RBP8.35□□□□□ -1.07
TRAPPC2-204ENST00000458511 MFSD10Q14728 455 aa8.34□□□□□ -1.07
TRAPPC2-204ENST00000458511 CLIP1P30622 1438 aa8.34□□□□□ -1.07
TRAPPC2-204ENST00000458511 PPP1R3GB7ZBB8 358 aa8.33□□□□□ -1.08
TRAPPC2-204ENST00000458511 NBPF3Q9H094 633 aa8.33□□□□□ -1.08
TRAPPC2-204ENST00000458511 ADAMTS12P58397 1594 aa8.32□□□□□ -1.08
TRAPPC2-204ENST00000458511 ARID3CA6NKF2 412 aa8.32□□□□□ -1.08
TRAPPC2-204ENST00000458511 RGS20O76081 388 aa8.32□□□□□ -1.08
TRAPPC2-204ENST00000458511 RABGEF1Q9UJ41 708 aa8.32□□□□□ -1.08
TRAPPC2-204ENST00000458511 EIF4G3O43432 1585 aaKnown RBP8.31□□□□□ -1.08
TRAPPC2-204ENST00000458511 KIAA1468Q9P260 1216 aa8.31□□□□□ -1.08
TRAPPC2-204ENST00000458511 SEPT9Q9UHD8 586 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC2-204ENST00000458511 GRIN2BQ13224 1484 aa8.31□□□□□ -1.08
TRAPPC2-204ENST00000458511 VPS8Q8N3P4 1428 aa8.3□□□□□ -1.08
TRAPPC2-204ENST00000458511 EFCAB5A4FU69 1503 aa8.3□□□□□ -1.08
TRAPPC2-204ENST00000458511 GPIHBP1Q8IV16 184 aa8.3□□□□□ -1.08
TRAPPC2-204ENST00000458511 KRI1Q8N9T8 703 aaKnown RBP8.3□□□□□ -1.08
TRAPPC2-204ENST00000458511 WBP1LQ9NX94 342 aa8.3□□□□□ -1.08
TRAPPC2-204ENST00000458511 TDRD9Q8NDG6 1382 aaKnown RBP8.3□□□□□ -1.08
TRAPPC2-204ENST00000458511 ITGBL1O95965 494 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC2-204ENST00000458511 RBM26Q5T8P6 1007 aaKnown RBP8.29□□□□□ -1.08
TRAPPC2-204ENST00000458511 ANKK1Q8NFD2 765 aa8.29□□□□□ -1.08
TRAPPC2-204ENST00000458511 FHAD1B1AJZ9 1412 aa8.29□□□□□ -1.08
TRAPPC2-204ENST00000458511 PDE4DQ08499 809 aa8.28□□□□□ -1.08
TRAPPC2-204ENST00000458511 ZFRQ96KR1 1074 aaKnown RBP8.28□□□□□ -1.08
TRAPPC2-204ENST00000458511 SOWAHBA6NEL2 793 aa8.27□□□□□ -1.09
TRAPPC2-204ENST00000458511 APBB1O00213 710 aa8.27□□□□□ -1.09
TRAPPC2-204ENST00000458511 TRIM66O15016 1216 aa8.27□□□□□ -1.09
TRAPPC2-204ENST00000458511 TYW1BQ6NUM6 668 aa8.27□□□□□ -1.09
TRAPPC2-204ENST00000458511 SAMD9Q5K651 1589 aa8.27□□□□□ -1.09
TRAPPC2-204ENST00000458511 ARAP1Q96P48 1450 aa8.26□□□□□ -1.09
TRAPPC2-204ENST00000458511 MAGI1Q96QZ7 1491 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC2-204ENST00000458511 ARHGAP35Q9NRY4 1499 aa8.26□□□□□ -1.09
TRAPPC2-204ENST00000458511 ZNF608Q9ULD9 1512 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC2-204ENST00000458511 AQRO60306 1485 aaKnown RBP eCLIP8.26□□□□□ -1.09
TRAPPC2-204ENST00000458511 LCE2BO14633 110 aa8.25□□□□□ -1.09
TRAPPC2-204ENST00000458511 PHF14O94880 888 aa8.25□□□□□ -1.09
TRAPPC2-204ENST00000458511 C6orf132Q5T0Z8 1188 aa8.25□□□□□ -1.09
TRAPPC2-204ENST00000458511 RBM33Q96EV2 1170 aaKnown RBP8.25□□□□□ -1.09
TRAPPC2-204ENST00000458511 MAP3K1Q13233 1512 aa8.24□□□□□ -1.09
TRAPPC2-204ENST00000458511 DPYSL4O14531 572 aa8.24□□□□□ -1.09
TRAPPC2-204ENST00000458511 MLLT3P42568 568 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC2-204ENST00000458511 IQGAP2Q13576 1575 aa8.23□□□□□ -1.09
TRAPPC2-204ENST00000458511 ZBTB7CA1YPR0 619 aa8.23□□□□□ -1.09
TRAPPC2-204ENST00000458511 PDIA4P13667 645 aaKnown RBP8.23□□□□□ -1.09
TRAPPC2-204ENST00000458511 CCDC9Q9Y3X0 531 aaKnown RBP8.23□□□□□ -1.09
TRAPPC2-204ENST00000458511 ARIH1Q9Y4X5 557 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC2-204ENST00000458511 CFAP43Q8NDM7 1665 aa8.22□□□□□ -1.09
TRAPPC2-204ENST00000458511 DDX12PQ92771 950 aa8.22□□□□□ -1.09
TRAPPC2-204ENST00000458511 FBXW7Q969H0 707 aa8.22□□□□□ -1.09
TRAPPC2-204ENST00000458511 FAM117AQ9C073 453 aa8.22□□□□□ -1.09
TRAPPC2-204ENST00000458511 SYNJ2O15056 1496 aa8.21□□□□□ -1.09
TRAPPC2-204ENST00000458511 SNAPC4Q5SXM2 1469 aa8.21□□□□□ -1.09
TRAPPC2-204ENST00000458511 Q6ZNB5 142 aa8.21□□□□□ -1.1
TRAPPC2-204ENST00000458511 LAPTM4BQ86VI4 370 aa8.21□□□□□ -1.1
TRAPPC2-204ENST00000458511 GRIN2AQ12879 1464 aa8.2□□□□□ -1.1
TRAPPC2-204ENST00000458511 UGGT2Q9NYU1 1516 aa8.2□□□□□ -1.1
TRAPPC2-204ENST00000458511 TRIM6-TRIM34B2RNG4 842 aa8.2□□□□□ -1.1
TRAPPC2-204ENST00000458511 C3orf80F5H4A9 247 aa8.2□□□□□ -1.1
TRAPPC2-204ENST00000458511 CAMK2BQ13554 666 aa8.2□□□□□ -1.1
TRAPPC2-204ENST00000458511 TSR1Q2NL82 804 aaKnown RBP8.2□□□□□ -1.1
TRAPPC2-204ENST00000458511 NECTIN2Q92692 538 aa8.2□□□□□ -1.1
TRAPPC2-204ENST00000458511 CHD1O14646 1710 aa8.2□□□□□ -1.1
TRAPPC2-204ENST00000458511 KCNC4Q03721 635 aa8.19□□□□□ -1.1
TRAPPC2-204ENST00000458511 TSKSQ9UJT2 592 aa8.19□□□□□ -1.1
TRAPPC2-204ENST00000458511 HPS5Q9UPZ3 1129 aa8.19□□□□□ -1.1
TRAPPC2-204ENST00000458511 KIAA0586Q9BVV6 1533 aa8.19□□□□□ -1.1
TRAPPC2-204ENST00000458511 LRRIQ1Q96JM4 1722 aa8.18□□□□□ -1.1
TRAPPC2-204ENST00000458511 PLEKHG3A1L390 1219 aa8.18□□□□□ -1.1
TRAPPC2-204ENST00000458511 CCDC82Q8N4S0 544 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms