RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 NRXN1Q9ULB1 1477 aa22.57■■□□□ 1.2
CCDC43-202ENST00000457422 SYNMO15061 1565 aa22.56■■□□□ 1.2
CCDC43-202ENST00000457422 EIF3AQ14152 1382 aaKnown RBP22.56■■□□□ 1.2
CCDC43-202ENST00000457422 PANK3Q9H999 370 aa22.55■■□□□ 1.2
CCDC43-202ENST00000457422 NPATQ14207 1427 aa22.54■■□□□ 1.2
CCDC43-202ENST00000457422 ABCC3O15438 1527 aa22.53■■□□□ 1.2
CCDC43-202ENST00000457422 ZMYM4Q5VZL5 1548 aa22.53■■□□□ 1.2
CCDC43-202ENST00000457422 CDCA8Q53HL2 280 aa22.53■■□□□ 1.2
CCDC43-202ENST00000457422 RICTORQ6R327 1708 aa22.52■■□□□ 1.2
CCDC43-202ENST00000457422 NUDCQ9Y266 331 aa22.52■■□□□ 1.2
CCDC43-202ENST00000457422 DIP2CQ9Y2E4 1556 aa22.51■■□□□ 1.19
CCDC43-202ENST00000457422 INSRP06213 1382 aa22.51■■□□□ 1.19
CCDC43-202ENST00000457422 MYOM1P52179 1685 aa22.51■■□□□ 1.19
CCDC43-202ENST00000457422 CAMSAP1Q5T5Y3 1602 aa22.5■■□□□ 1.19
CCDC43-202ENST00000457422 MYO3AQ8NEV4 1616 aa22.5■■□□□ 1.19
CCDC43-202ENST00000457422 CC2D1BQ5T0F9 858 aaKnown RBP22.5■■□□□ 1.19
CCDC43-202ENST00000457422 GLI2P10070 1586 aa22.49■■□□□ 1.19
CCDC43-202ENST00000457422 PPLO60437 1756 aa22.49■■□□□ 1.19
CCDC43-202ENST00000457422 ADGRF5Q8IZF2 1346 aa22.49■■□□□ 1.19
CCDC43-202ENST00000457422 GGT6Q6P531 493 aa22.49■■□□□ 1.19
CCDC43-202ENST00000457422 SETBP1Q9Y6X0 1596 aa22.49■■□□□ 1.19
CCDC43-202ENST00000457422 KDM5AP29375 1690 aaKnown RBP22.49■■□□□ 1.19
CCDC43-202ENST00000457422 RAPGEF3O95398 923 aa22.48■■□□□ 1.19
CCDC43-202ENST00000457422 SLC24A1O60721 1099 aa22.48■■□□□ 1.19
CCDC43-202ENST00000457422 SENP3-EIF4A1A0A087X0R7 540 aa22.46■■□□□ 1.19
CCDC43-202ENST00000457422 CFAP70Q5T0N1 1121 aa22.46■■□□□ 1.19
CCDC43-202ENST00000457422 ZC3H13Q5T200 1668 aaKnown RBP22.46■■□□□ 1.19
CCDC43-202ENST00000457422 RNF123Q5XPI4 1314 aa22.46■■□□□ 1.19
CCDC43-202ENST00000457422 PPP4R2Q9NY27 417 aa22.45■■□□□ 1.18
CCDC43-202ENST00000457422 CFAP65Q6ZU64 1925 aaKnown RBP22.44■■□□□ 1.18
CCDC43-202ENST00000457422 PIK3C2BO00750 1634 aa22.44■■□□□ 1.18
CCDC43-202ENST00000457422 NOS1P29475 1434 aa22.44■■□□□ 1.18
CCDC43-202ENST00000457422 SIGLEC1Q9BZZ2 1709 aa22.43■■□□□ 1.18
CCDC43-202ENST00000457422 SBNO2Q9Y2G9 1366 aa22.43■■□□□ 1.18
CCDC43-202ENST00000457422 CHGAP10645 457 aaKnown RBP22.42■■□□□ 1.18
CCDC43-202ENST00000457422 PIK3C2GO75747 1445 aa22.41■■□□□ 1.18
CCDC43-202ENST00000457422 BLMP54132 1417 aaPredicted RBP22.41■■□□□ 1.18
CCDC43-202ENST00000457422 ASXL1Q8IXJ9 1541 aa22.41■■□□□ 1.18
CCDC43-202ENST00000457422 NPC1L1Q9UHC9 1359 aa22.41■■□□□ 1.18
CCDC43-202ENST00000457422 ARHGAP31Q2M1Z3 1444 aa22.41■■□□□ 1.18
CCDC43-202ENST00000457422 ERVK-7P63135 1459 aa22.41■■□□□ 1.18
CCDC43-202ENST00000457422 RPGRIP1LQ68CZ1 1315 aa22.4■■□□□ 1.18
CCDC43-202ENST00000457422 KNSTRNQ9Y448 316 aa22.4■■□□□ 1.18
CCDC43-202ENST00000457422 AMER1Q5JTC6 1135 aaPredicted RBP22.38■■□□□ 1.17
CCDC43-202ENST00000457422 CYB5RLQ6IPT4 315 aa22.38■■□□□ 1.17
CCDC43-202ENST00000457422 YEATS2Q9ULM3 1422 aa22.37■■□□□ 1.17
CCDC43-202ENST00000457422 ADGRB1O14514 1584 aa22.36■■□□□ 1.17
CCDC43-202ENST00000457422 RIMBP3CA6NJZ7 1639 aa22.36■■□□□ 1.17
CCDC43-202ENST00000457422 RIMBP3BA6NNM3 1639 aa22.36■■□□□ 1.17
CCDC43-202ENST00000457422 RIMBP3Q9UFD9 1639 aa22.36■■□□□ 1.17
CCDC43-202ENST00000457422 PDE3BQ13370 1112 aa22.35■■□□□ 1.17
CCDC43-202ENST00000457422 C14orf93Q9H972 538 aaKnown RBP22.34■■□□□ 1.17
CCDC43-202ENST00000457422 DIP2BQ9P265 1576 aa22.32■■□□□ 1.16
CCDC43-202ENST00000457422 NEXMIFQ5QGS0 1516 aa22.32■■□□□ 1.16
CCDC43-202ENST00000457422 PPP2R1AP30153 589 aa22.31■■□□□ 1.16
CCDC43-202ENST00000457422 QRICH2Q9H0J4 1663 aa22.31■■□□□ 1.16
CCDC43-202ENST00000457422 CENPJQ9HC77 1338 aaPredicted RBP22.29■■□□□ 1.16
CCDC43-202ENST00000457422 SALL2Q9Y467 1007 aaPredicted RBP22.28■■□□□ 1.16
CCDC43-202ENST00000457422 PREX1Q8TCU6 1659 aa22.27■■□□□ 1.16
CCDC43-202ENST00000457422 B4GALNT3Q6L9W6 998 aa22.26■■□□□ 1.15
CCDC43-202ENST00000457422 ZFYVE9O95405 1425 aa22.25■■□□□ 1.15
CCDC43-202ENST00000457422 REREQ9P2R6 1566 aa22.25■■□□□ 1.15
CCDC43-202ENST00000457422 FAM69CQ0P6D2 419 aa22.24■■□□□ 1.15
CCDC43-202ENST00000457422 TRAK1Q9UPV9 953 aa22.24■■□□□ 1.15
CCDC43-202ENST00000457422 RBM19Q9Y4C8 960 aaKnown RBP22.24■■□□□ 1.15
CCDC43-202ENST00000457422 ARHGEF28Q8N1W1 1705 aaKnown RBP22.24■■□□□ 1.15
CCDC43-202ENST00000457422 SLC52A1Q9NWF4 448 aa22.23■■□□□ 1.15
CCDC43-202ENST00000457422 VGFO15240 615 aaPredicted RBP22.22■■□□□ 1.15
CCDC43-202ENST00000457422 TMEM132EQ6IEE7 984 aa22.22■■□□□ 1.15
CCDC43-202ENST00000457422 ADAMTS8Q9UP79 889 aa22.21■■□□□ 1.15
CCDC43-202ENST00000457422 TMEM131LA2VDJ0 1609 aa22.21■■□□□ 1.15
CCDC43-202ENST00000457422 MYO5BQ9ULV0 1848 aa22.2■■□□□ 1.14
CCDC43-202ENST00000457422 NUTM2DQ5VT03 806 aaPredicted RBP22.2■■□□□ 1.14
CCDC43-202ENST00000457422 TSPOAP1O95153 1857 aa22.2■■□□□ 1.14
CCDC43-202ENST00000457422 IDI1Q13907 227 aa22.19■■□□□ 1.14
CCDC43-202ENST00000457422 CARD14Q9BXL6 1004 aa22.19■■□□□ 1.14
CCDC43-202ENST00000457422 RCAN3Q9UKA8 241 aa22.19■■□□□ 1.14
CCDC43-202ENST00000457422 AGLP35573 1532 aa22.19■■□□□ 1.14
CCDC43-202ENST00000457422 USP32Q8NFA0 1604 aa22.18■■□□□ 1.14
CCDC43-202ENST00000457422 RRP1P56182 461 aaKnown RBP22.18■■□□□ 1.14
CCDC43-202ENST00000457422 WDR43Q15061 677 aaKnown RBP eCLIP22.18■■□□□ 1.14
CCDC43-202ENST00000457422 CDCA7LQ96GN5 454 aa22.18■■□□□ 1.14
CCDC43-202ENST00000457422 PUS7Q96PZ0 661 aaKnown RBP22.18■■□□□ 1.14
CCDC43-202ENST00000457422 TULP4Q9NRJ4 1543 aa22.13■■□□□ 1.13
CCDC43-202ENST00000457422 PPP6R1Q9UPN7 881 aa22.12■■□□□ 1.13
CCDC43-202ENST00000457422 NSD3Q9BZ95 1437 aa22.12■■□□□ 1.13
CCDC43-202ENST00000457422 ZNF521Q96K83 1311 aa22.11■■□□□ 1.13
CCDC43-202ENST00000457422 CCDC136Q96JN2 1154 aa22.1■■□□□ 1.13
CCDC43-202ENST00000457422 PLEKHH1Q9ULM0 1364 aa22.1■■□□□ 1.13
CCDC43-202ENST00000457422 POLR3AO14802 1390 aaPredicted RBP22.09■■□□□ 1.13
CCDC43-202ENST00000457422 EVC2Q86UK5 1308 aa22.08■■□□□ 1.13
CCDC43-202ENST00000457422 FBXO31Q5XUX0 539 aaPredicted RBP22.08■■□□□ 1.13
CCDC43-202ENST00000457422 SLC12A5Q9H2X9 1139 aa22.08■■□□□ 1.13
CCDC43-202ENST00000457422 CLTCQ00610 1675 aaKnown RBP22.06■■□□□ 1.12
CCDC43-202ENST00000457422 SPATA31D1Q6ZQQ2 1576 aa22.05■■□□□ 1.12
CCDC43-202ENST00000457422 SHPRHQ149N8 1683 aa22.04■■□□□ 1.12
CCDC43-202ENST00000457422 ANKRD36BQ8N2N9 1353 aa22.04■■□□□ 1.12
CCDC43-202ENST00000457422 PTPRMP28827 1452 aa22.04■■□□□ 1.12
CCDC43-202ENST00000457422 KIF13AQ9H1H9 1805 aa22.03■■□□□ 1.12
CCDC43-202ENST00000457422 SENP3Q9H4L4 574 aaPredicted RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms