RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 DAPK1P53355 1430 aa20.76■□□□□ 0.91
SNHG17-208ENST00000456953 PTPN23Q9H3S7 1636 aa20.75■□□□□ 0.91
SNHG17-208ENST00000456953 FGD6Q6ZV73 1430 aa20.75■□□□□ 0.91
SNHG17-208ENST00000456953 SPATA31A6Q5VVP1 1343 aa20.75■□□□□ 0.91
SNHG17-208ENST00000456953 ANKRD30AQ9BXX3 1397 aa20.73■□□□□ 0.91
SNHG17-208ENST00000456953 ZNF772Q68DY9 489 aaPredicted RBP20.73■□□□□ 0.91
SNHG17-208ENST00000456953 CHD2O14647 1828 aaKnown RBP20.73■□□□□ 0.91
SNHG17-208ENST00000456953 PLEKHG1Q9ULL1 1385 aa20.72■□□□□ 0.91
SNHG17-208ENST00000456953 ZFYVE9O95405 1425 aa20.72■□□□□ 0.91
SNHG17-208ENST00000456953 NCOA3Q9Y6Q9 1424 aa20.72■□□□□ 0.91
SNHG17-208ENST00000456953 LRP6O75581 1613 aa20.72■□□□□ 0.91
SNHG17-208ENST00000456953 UPF1Q92900 1129 aaKnown RBP eCLIP20.72■□□□□ 0.917e-6■■■■□ 24.4
SNHG17-208ENST00000456953 SRCAPQ6ZRS2 3230 aa20.72■□□□□ 0.91
SNHG17-208ENST00000456953 MEX3CQ5U5Q3 659 aaKnown RBP20.71■□□□□ 0.91
SNHG17-208ENST00000456953 RPRD2Q5VT52 1461 aaKnown RBP20.69■□□□□ 0.9
SNHG17-208ENST00000456953 HDGFP51858 240 aaKnown RBP20.69■□□□□ 0.9
SNHG17-208ENST00000456953 PPP1R15AO75807 674 aaPredicted RBP20.68■□□□□ 0.9
SNHG17-208ENST00000456953 AHDC1Q5TGY3 1603 aaPredicted RBP20.67■□□□□ 0.9
SNHG17-208ENST00000456953 TRIM52Q96A61 297 aa20.67■□□□□ 0.9
SNHG17-208ENST00000456953 TBX22Q9Y458 520 aa20.67■□□□□ 0.9
SNHG17-208ENST00000456953 RIMS2Q9UQ26 1411 aa20.67■□□□□ 0.9
SNHG17-208ENST00000456953 SHPRHQ149N8 1683 aa20.67■□□□□ 0.9
SNHG17-208ENST00000456953 C14orf37Q86TY3 774 aa20.66■□□□□ 0.9
SNHG17-208ENST00000456953 CADPS2Q86UW7 1296 aa20.66■□□□□ 0.9
SNHG17-208ENST00000456953 CHIC2Q9UKJ5 165 aa20.66■□□□□ 0.9
SNHG17-208ENST00000456953 MYO5BQ9ULV0 1848 aa20.64■□□□□ 0.9
SNHG17-208ENST00000456953 C19orf44Q9H6X5 657 aa20.64■□□□□ 0.89
SNHG17-208ENST00000456953 ATF3P18847 181 aa20.63■□□□□ 0.89
SNHG17-208ENST00000456953 RXRBP28702 533 aa20.63■□□□□ 0.89
SNHG17-208ENST00000456953 GCC2Q8IWJ2 1684 aa20.63■□□□□ 0.89
SNHG17-208ENST00000456953 TMEM131LA2VDJ0 1609 aa20.63■□□□□ 0.89
SNHG17-208ENST00000456953 CDK12Q9NYV4 1490 aaPredicted RBP20.62■□□□□ 0.89
SNHG17-208ENST00000456953 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.62■□□□□ 0.89
SNHG17-208ENST00000456953 PIK3R4Q99570 1358 aa20.61■□□□□ 0.89
SNHG17-208ENST00000456953 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.61■□□□□ 0.89
SNHG17-208ENST00000456953 ADGRL2O95490 1459 aa20.61■□□□□ 0.89
SNHG17-208ENST00000456953 DIP2AQ14689 1571 aa20.6■□□□□ 0.89
SNHG17-208ENST00000456953 ADAMTS13Q76LX8 1427 aa20.59■□□□□ 0.89
SNHG17-208ENST00000456953 APLP2Q06481 763 aa20.58■□□□□ 0.89
SNHG17-208ENST00000456953 ANKRD50Q9ULJ7 1429 aa20.57■□□□□ 0.88
SNHG17-208ENST00000456953 BRINP3Q76B58 766 aa20.56■□□□□ 0.88
SNHG17-208ENST00000456953 LOC105371045A0A1W2PR82 267 aa20.55■□□□□ 0.88
SNHG17-208ENST00000456953 NUTM2BA6NNL0 878 aaPredicted RBP20.54■□□□□ 0.88
SNHG17-208ENST00000456953 NUTM2EB1AL46 878 aaPredicted RBP20.54■□□□□ 0.88
SNHG17-208ENST00000456953 NUTM2AQ8IVF1 878 aaPredicted RBP20.54■□□□□ 0.88
SNHG17-208ENST00000456953 AFF2P51816 1311 aa20.53■□□□□ 0.88
SNHG17-208ENST00000456953 DCCP43146 1447 aa20.53■□□□□ 0.88
SNHG17-208ENST00000456953 TRPM2O94759 1503 aa20.53■□□□□ 0.88
SNHG17-208ENST00000456953 CHGAP10645 457 aaKnown RBP20.53■□□□□ 0.88
SNHG17-208ENST00000456953 SETD5Q9C0A6 1442 aa20.52■□□□□ 0.87
SNHG17-208ENST00000456953 NUTM2DQ5VT03 806 aaPredicted RBP20.51■□□□□ 0.87
SNHG17-208ENST00000456953 AMOTL2Q9Y2J4 779 aa20.51■□□□□ 0.87
SNHG17-208ENST00000456953 ASXL1Q8IXJ9 1541 aa20.51■□□□□ 0.87
SNHG17-208ENST00000456953 UNC13BO14795 1591 aa20.48■□□□□ 0.87
SNHG17-208ENST00000456953 PTPRUQ92729 1446 aa20.48■□□□□ 0.87
SNHG17-208ENST00000456953 NHSL1Q5SYE7 1610 aa20.47■□□□□ 0.87
SNHG17-208ENST00000456953 LRRC59Q96AG4 307 aaKnown RBP20.47■□□□□ 0.87
SNHG17-208ENST00000456953 RGS12O14924 1447 aa20.46■□□□□ 0.87
SNHG17-208ENST00000456953 E9PCH4 1651 aa20.46■□□□□ 0.87
SNHG17-208ENST00000456953 RBM6P78332 1123 aaKnown RBP20.46■□□□□ 0.87
SNHG17-208ENST00000456953 MST1RQ04912 1400 aa20.45■□□□□ 0.86
SNHG17-208ENST00000456953 XRN1Q8IZH2 1706 aaKnown RBP20.44■□□□□ 0.86
SNHG17-208ENST00000456953 FAM50AQ14320 339 aaKnown RBP20.44■□□□□ 0.86
SNHG17-208ENST00000456953 C8orf37Q96NL8 207 aa20.44■□□□□ 0.86
SNHG17-208ENST00000456953 QTRT2Q9H974 415 aaKnown RBP20.44■□□□□ 0.86
SNHG17-208ENST00000456953 PNPLA6Q8IY17 1366 aa20.41■□□□□ 0.86
SNHG17-208ENST00000456953 SETBP1Q9Y6X0 1596 aa20.41■□□□□ 0.86
SNHG17-208ENST00000456953 IQGAP3Q86VI3 1631 aa20.4■□□□□ 0.86
SNHG17-208ENST00000456953 EP400Q96L91 3159 aa20.4■□□□□ 0.86
SNHG17-208ENST00000456953 NRXN3Q9Y4C0 1643 aa20.39■□□□□ 0.86
SNHG17-208ENST00000456953 NGLY1Q96IV0 654 aa20.39■□□□□ 0.85
SNHG17-208ENST00000456953 ADGRL3Q9HAR2 1447 aa20.37■□□□□ 0.85
SNHG17-208ENST00000456953 ATAD2Q6PL18 1390 aa20.37■□□□□ 0.85
SNHG17-208ENST00000456953 DDX17Q92841 729 aaKnown RBP20.36■□□□□ 0.85
SNHG17-208ENST00000456953 METP08581 1390 aa20.34■□□□□ 0.85
SNHG17-208ENST00000456953 ROCK1Q13464 1354 aa20.34■□□□□ 0.85
SNHG17-208ENST00000456953 ADAMTS2O95450 1211 aa20.33■□□□□ 0.85
SNHG17-208ENST00000456953 FOXD1Q16676 465 aa20.33■□□□□ 0.85
SNHG17-208ENST00000456953 NUP155O75694 1391 aa20.33■□□□□ 0.84
SNHG17-208ENST00000456953 NALCNQ8IZF0 1738 aa20.32■□□□□ 0.84
SNHG17-208ENST00000456953 LAMC1P11047 1609 aa20.31■□□□□ 0.84
SNHG17-208ENST00000456953 C1orf167Q5SNV9 1468 aa20.3■□□□□ 0.84
SNHG17-208ENST00000456953 ZNF326Q5BKZ1 582 aaKnown RBP20.29■□□□□ 0.84
SNHG17-208ENST00000456953 ZRANB1Q9UGI0 708 aa20.29■□□□□ 0.84
SNHG17-208ENST00000456953 USP21Q9UK80 565 aa20.29■□□□□ 0.84
SNHG17-208ENST00000456953 TRPC5Q9UL62 973 aaPredicted RBP20.29■□□□□ 0.84
SNHG17-208ENST00000456953 PTCH1Q13635 1447 aa20.27■□□□□ 0.84
SNHG17-208ENST00000456953 SPHKAPQ2M3C7 1700 aa20.27■□□□□ 0.83
SNHG17-208ENST00000456953 SOS2Q07890 1332 aaPredicted RBP20.27■□□□□ 0.83
SNHG17-208ENST00000456953 FNBP4Q8N3X1 1017 aaPredicted RBP20.26■□□□□ 0.83
SNHG17-208ENST00000456953 ATRNO75882 1429 aa20.24■□□□□ 0.83
SNHG17-208ENST00000456953 CCDC125Q86Z20 511 aa20.23■□□□□ 0.83
SNHG17-208ENST00000456953 NEXMIFQ5QGS0 1516 aa20.22■□□□□ 0.83
SNHG17-208ENST00000456953 COL22A1Q8NFW1 1626 aaPredicted RBP20.22■□□□□ 0.83
SNHG17-208ENST00000456953 ORAI2Q96SN7 254 aa20.21■□□□□ 0.83
SNHG17-208ENST00000456953 ROBO2Q9HCK4 1378 aa20.18■□□□□ 0.82
SNHG17-208ENST00000456953 PRAG1Q86YV5 1406 aa20.18■□□□□ 0.82
SNHG17-208ENST00000456953 MYOM2P54296 1465 aa20.18■□□□□ 0.82
SNHG17-208ENST00000456953 CLTCL1P53675 1640 aa20.17■□□□□ 0.82
SNHG17-208ENST00000456953 BCL9LQ86UU0 1499 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms