RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 ZFYVE9O95405 1425 aa18.89■□□□□ 0.61
SMCR2-201ENST00000456090 SPHKAPQ2M3C7 1700 aa18.88■□□□□ 0.61
SMCR2-201ENST00000456090 BCANQ96GW7 911 aa18.87■□□□□ 0.61
SMCR2-201ENST00000456090 RIMS2Q9UQ26 1411 aa18.87■□□□□ 0.61
SMCR2-201ENST00000456090 CHD2O14647 1828 aaKnown RBP18.86■□□□□ 0.61
SMCR2-201ENST00000456090 CHGAP10645 457 aaKnown RBP18.86■□□□□ 0.61
SMCR2-201ENST00000456090 SENP3Q9H4L4 574 aaPredicted RBP18.86■□□□□ 0.61
SMCR2-201ENST00000456090 PPP1R15AO75807 674 aaPredicted RBP18.85■□□□□ 0.61
SMCR2-201ENST00000456090 ILDR2Q71H61 639 aa18.85■□□□□ 0.61
SMCR2-201ENST00000456090 NWD1Q149M9 1564 aa18.85■□□□□ 0.61
SMCR2-201ENST00000456090 KCNA6P17658 529 aa18.84■□□□□ 0.61
SMCR2-201ENST00000456090 PLEKHG1Q9ULL1 1385 aa18.83■□□□□ 0.61
SMCR2-201ENST00000456090 HDGFP51858 240 aaKnown RBP18.83■□□□□ 0.6
SMCR2-201ENST00000456090 TMEM94Q12767 1356 aa18.81■□□□□ 0.6
SMCR2-201ENST00000456090 NKTRP30414 1462 aaKnown RBP18.81■□□□□ 0.6
SMCR2-201ENST00000456090 NAIPQ13075 1403 aa18.81■□□□□ 0.6
SMCR2-201ENST00000456090 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.8■□□□□ 0.6
SMCR2-201ENST00000456090 MED1Q15648 1581 aaPredicted RBP18.8■□□□□ 0.6
SMCR2-201ENST00000456090 NUTM2DQ5VT03 806 aaPredicted RBP18.79■□□□□ 0.6
SMCR2-201ENST00000456090 PROSER2Q86WR7 435 aaPredicted RBP18.79■□□□□ 0.6
SMCR2-201ENST00000456090 RBM33Q96EV2 1170 aaKnown RBP18.79■□□□□ 0.6
SMCR2-201ENST00000456090 KIF1BO60333 1816 aa18.77■□□□□ 0.6
SMCR2-201ENST00000456090 DIP2AQ14689 1571 aa18.76■□□□□ 0.59
SMCR2-201ENST00000456090 CLTCL1P53675 1640 aa18.75■□□□□ 0.59
SMCR2-201ENST00000456090 ROBO1Q9Y6N7 1651 aa18.75■□□□□ 0.59
SMCR2-201ENST00000456090 HFM1A2PYH4 1435 aa18.74■□□□□ 0.59
SMCR2-201ENST00000456090 ADAMTS13Q76LX8 1427 aa18.74■□□□□ 0.59
SMCR2-201ENST00000456090 TBX22Q9Y458 520 aa18.74■□□□□ 0.59
SMCR2-201ENST00000456090 TRPM2O94759 1503 aa18.74■□□□□ 0.59
SMCR2-201ENST00000456090 MSH6P52701 1360 aa18.72■□□□□ 0.59
SMCR2-201ENST00000456090 NRXN3Q9Y4C0 1643 aa18.72■□□□□ 0.59
SMCR2-201ENST00000456090 FAM135BQ49AJ0 1406 aa18.71■□□□□ 0.59
SMCR2-201ENST00000456090 ZNF326Q5BKZ1 582 aaKnown RBP18.7■□□□□ 0.58
SMCR2-201ENST00000456090 TRIM52Q96A61 297 aa18.7■□□□□ 0.58
SMCR2-201ENST00000456090 SOCS7O14512 581 aa18.69■□□□□ 0.58
SMCR2-201ENST00000456090 PIK3R4Q99570 1358 aa18.68■□□□□ 0.58
SMCR2-201ENST00000456090 SETBP1Q9Y6X0 1596 aa18.68■□□□□ 0.58
SMCR2-201ENST00000456090 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.67■□□□□ 0.58
SMCR2-201ENST00000456090 NEXMIFQ5QGS0 1516 aa18.67■□□□□ 0.58
SMCR2-201ENST00000456090 PHLPP1O60346 1717 aa18.65■□□□□ 0.58
SMCR2-201ENST00000456090 XRN1Q8IZH2 1706 aaKnown RBP18.65■□□□□ 0.58
SMCR2-201ENST00000456090 PTPRUQ92729 1446 aa18.65■□□□□ 0.58
SMCR2-201ENST00000456090 NCOA3Q9Y6Q9 1424 aa18.65■□□□□ 0.58
SMCR2-201ENST00000456090 C14orf37Q86TY3 774 aa18.64■□□□□ 0.57
SMCR2-201ENST00000456090 PHF23Q9BUL5 403 aaPredicted RBP18.64■□□□□ 0.57
SMCR2-201ENST00000456090 SLC4A1APQ9BWU0 796 aaKnown RBP18.64■□□□□ 0.57
SMCR2-201ENST00000456090 SLAIN2Q9P270 581 aa18.63■□□□□ 0.57
SMCR2-201ENST00000456090 AMOTL2Q9Y2J4 779 aa18.63■□□□□ 0.57
SMCR2-201ENST00000456090 PPLO60437 1756 aa18.6■□□□□ 0.57
SMCR2-201ENST00000456090 METP08581 1390 aa18.59■□□□□ 0.57
SMCR2-201ENST00000456090 C19orf44Q9H6X5 657 aa18.59■□□□□ 0.57
SMCR2-201ENST00000456090 SETD1AO15047 1707 aaKnown RBP18.59■□□□□ 0.57
SMCR2-201ENST00000456090 ATF3P18847 181 aa18.57■□□□□ 0.56
SMCR2-201ENST00000456090 FOXD1Q16676 465 aa18.57■□□□□ 0.56
SMCR2-201ENST00000456090 CADPS2Q86UW7 1296 aa18.57■□□□□ 0.56
SMCR2-201ENST00000456090 COL16A1Q07092 1604 aaPredicted RBP18.56■□□□□ 0.56
SMCR2-201ENST00000456090 NALCNQ8IZF0 1738 aa18.54■□□□□ 0.56
SMCR2-201ENST00000456090 VGFO15240 615 aaPredicted RBP18.53■□□□□ 0.56
SMCR2-201ENST00000456090 DCCP43146 1447 aa18.52■□□□□ 0.56
SMCR2-201ENST00000456090 AHDC1Q5TGY3 1603 aaPredicted RBP18.52■□□□□ 0.55
SMCR2-201ENST00000456090 RPGRIP1LQ68CZ1 1315 aa18.51■□□□□ 0.55
SMCR2-201ENST00000456090 CCDC144AA2RUR9 1427 aa18.51■□□□□ 0.55
SMCR2-201ENST00000456090 IFT172Q9UG01 1749 aa18.51■□□□□ 0.55
SMCR2-201ENST00000456090 MPHOSPH9Q99550 1183 aa18.5■□□□□ 0.55
SMCR2-201ENST00000456090 RGS17Q9UGC6 210 aaPredicted RBP18.5■□□□□ 0.55
SMCR2-201ENST00000456090 JCADQ9P266 1359 aa18.5■□□□□ 0.55
SMCR2-201ENST00000456090 ADGRL3Q9HAR2 1447 aa18.49■□□□□ 0.55
SMCR2-201ENST00000456090 SHPRHQ149N8 1683 aa18.48■□□□□ 0.55
SMCR2-201ENST00000456090 BRINP3Q76B58 766 aa18.47■□□□□ 0.55
SMCR2-201ENST00000456090 ASXL1Q8IXJ9 1541 aa18.47■□□□□ 0.55
SMCR2-201ENST00000456090 MST1RQ04912 1400 aa18.47■□□□□ 0.55
SMCR2-201ENST00000456090 PTCH1Q13635 1447 aa18.47■□□□□ 0.55
SMCR2-201ENST00000456090 SETD5Q9C0A6 1442 aa18.47■□□□□ 0.55
SMCR2-201ENST00000456090 NHSL1Q5SYE7 1610 aa18.46■□□□□ 0.55
SMCR2-201ENST00000456090 SPATA31E1Q6ZUB1 1445 aa18.45■□□□□ 0.54
SMCR2-201ENST00000456090 RGL3Q3MIN7 710 aa18.44■□□□□ 0.54
SMCR2-201ENST00000456090 ROBO2Q9HCK4 1378 aa18.43■□□□□ 0.54
SMCR2-201ENST00000456090 ACIN1Q9UKV3 1341 aaKnown RBP18.43■□□□□ 0.54
SMCR2-201ENST00000456090 ADGRF5Q8IZF2 1346 aa18.42■□□□□ 0.54
SMCR2-201ENST00000456090 PRAG1Q86YV5 1406 aa18.41■□□□□ 0.54
SMCR2-201ENST00000456090 LRP6O75581 1613 aa18.41■□□□□ 0.54
SMCR2-201ENST00000456090 RAB3GAP2Q9H2M9 1393 aa18.41■□□□□ 0.54
SMCR2-201ENST00000456090 SPATA31A6Q5VVP1 1343 aa18.4■□□□□ 0.54
SMCR2-201ENST00000456090 ANKRD30BQ9BXX2 1392 aa18.4■□□□□ 0.54
SMCR2-201ENST00000456090 POTEAQ6S8J7 498 aa18.39■□□□□ 0.53
SMCR2-201ENST00000456090 C1orf167Q5SNV9 1468 aa18.38■□□□□ 0.53
SMCR2-201ENST00000456090 KNDC1Q76NI1 1749 aa18.37■□□□□ 0.53
SMCR2-201ENST00000456090 PIK3C2GO75747 1445 aa18.36■□□□□ 0.53
SMCR2-201ENST00000456090 MEX3CQ5U5Q3 659 aaKnown RBP18.36■□□□□ 0.53
SMCR2-201ENST00000456090 DDX17Q92841 729 aaKnown RBP18.36■□□□□ 0.53
SMCR2-201ENST00000456090 LAMC1P11047 1609 aa18.35■□□□□ 0.53
SMCR2-201ENST00000456090 CDC42BPGQ6DT37 1551 aa18.34■□□□□ 0.53
SMCR2-201ENST00000456090 STK26Q9P289 416 aa18.33■□□□□ 0.52
SMCR2-201ENST00000456090 TECPR2O15040 1411 aa18.32■□□□□ 0.52
SMCR2-201ENST00000456090 NUTM2BA6NNL0 878 aaPredicted RBP18.32■□□□□ 0.52
SMCR2-201ENST00000456090 NUTM2EB1AL46 878 aaPredicted RBP18.32■□□□□ 0.52
SMCR2-201ENST00000456090 TMEM132EQ6IEE7 984 aa18.32■□□□□ 0.52
SMCR2-201ENST00000456090 NUTM2AQ8IVF1 878 aaPredicted RBP18.32■□□□□ 0.52
SMCR2-201ENST00000456090 LRRC59Q96AG4 307 aaKnown RBP18.32■□□□□ 0.52
SMCR2-201ENST00000456090 LRPPRCP42704 1394 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms