RNA–Protein interactions for RNA: ENST00000455695.1

RGPD6-205, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-205ENST00000455695 TMEM2Q9UHN6 1383 aa31.74■■■□□ 2.67
RGPD6-205ENST00000455695 STRCP1A6NGW2 1772 aa31.73■■■□□ 2.67
RGPD6-205ENST00000455695 SPHKAPQ2M3C7 1700 aa31.7■■■□□ 2.67
RGPD6-205ENST00000455695 MYO5BQ9ULV0 1848 aa31.69■■■□□ 2.66
RGPD6-205ENST00000455695 LTKP29376 864 aa31.68■■■□□ 2.66
RGPD6-205ENST00000455695 ACIN1Q9UKV3 1341 aaKnown RBP31.67■■■□□ 2.66
RGPD6-205ENST00000455695 CHGAP10645 457 aaKnown RBP31.66■■■□□ 2.66
RGPD6-205ENST00000455695 HDGFP51858 240 aaKnown RBP31.66■■■□□ 2.66
RGPD6-205ENST00000455695 TMEM131LA2VDJ0 1609 aa31.65■■■□□ 2.66
RGPD6-205ENST00000455695 SENP3Q9H4L4 574 aaPredicted RBP31.65■■■□□ 2.66
RGPD6-205ENST00000455695 RGS17Q9UGC6 210 aaPredicted RBP31.65■■■□□ 2.66
RGPD6-205ENST00000455695 SLC4A1APQ9BWU0 796 aaKnown RBP31.63■■■□□ 2.65
RGPD6-205ENST00000455695 SETD5Q9C0A6 1442 aa31.59■■■□□ 2.65
RGPD6-205ENST00000455695 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.56■■■□□ 2.64
RGPD6-205ENST00000455695 RIMS2Q9UQ26 1411 aa31.56■■■□□ 2.64
RGPD6-205ENST00000455695 TRPM2O94759 1503 aa31.55■■■□□ 2.64
RGPD6-205ENST00000455695 PPP1R15AO75807 674 aaPredicted RBP31.55■■■□□ 2.64
RGPD6-205ENST00000455695 ZFYVE9O95405 1425 aa31.54■■■□□ 2.64
RGPD6-205ENST00000455695 BCANQ96GW7 911 aa31.53■■■□□ 2.64
RGPD6-205ENST00000455695 KIF1BO60333 1816 aa31.52■■■□□ 2.64
RGPD6-205ENST00000455695 FAM135BQ49AJ0 1406 aa31.52■■■□□ 2.64
RGPD6-205ENST00000455695 CLTCL1P53675 1640 aa31.49■■■□□ 2.63
RGPD6-205ENST00000455695 MPHOSPH9Q99550 1183 aa31.48■■■□□ 2.63
RGPD6-205ENST00000455695 XIRP1Q702N8 1843 aaKnown RBP31.47■■■□□ 2.63
RGPD6-205ENST00000455695 PLEKHG1Q9ULL1 1385 aa31.47■■■□□ 2.63
RGPD6-205ENST00000455695 ZNF326Q5BKZ1 582 aaKnown RBP31.46■■■□□ 2.63
RGPD6-205ENST00000455695 RAB3GAP2Q9H2M9 1393 aa31.44■■■□□ 2.62
RGPD6-205ENST00000455695 SLC26A8Q96RN1 970 aa31.44■■■□□ 2.62
RGPD6-205ENST00000455695 POTEAQ6S8J7 498 aa31.42■■■□□ 2.62
RGPD6-205ENST00000455695 NUTM2DQ5VT03 806 aaPredicted RBP31.4■■■□□ 2.62
RGPD6-205ENST00000455695 FOXD1Q16676 465 aa31.39■■■□□ 2.62
RGPD6-205ENST00000455695 TMEM94Q12767 1356 aa31.36■■■□□ 2.61
RGPD6-205ENST00000455695 KCNA6P17658 529 aa31.36■■■□□ 2.61
RGPD6-205ENST00000455695 HRCP23327 699 aa31.35■■■□□ 2.61
RGPD6-205ENST00000455695 TBX22Q9Y458 520 aa31.35■■■□□ 2.61
RGPD6-205ENST00000455695 CCDC144AA2RUR9 1427 aa31.34■■■□□ 2.61
RGPD6-205ENST00000455695 DIP2AQ14689 1571 aa31.34■■■□□ 2.61
RGPD6-205ENST00000455695 CHD2O14647 1828 aaKnown RBP31.31■■■□□ 2.6
RGPD6-205ENST00000455695 NEXMIFQ5QGS0 1516 aa31.29■■■□□ 2.6
RGPD6-205ENST00000455695 PROSER2Q86WR7 435 aaPredicted RBP31.29■■■□□ 2.6
RGPD6-205ENST00000455695 RPGRIP1LQ68CZ1 1315 aa31.28■■■□□ 2.6
RGPD6-205ENST00000455695 NWD1Q149M9 1564 aa31.28■■■□□ 2.6
RGPD6-205ENST00000455695 ADAMTS13Q76LX8 1427 aa31.28■■■□□ 2.6
RGPD6-205ENST00000455695 ROBO1Q9Y6N7 1651 aa31.27■■■□□ 2.6
RGPD6-205ENST00000455695 NKTRP30414 1462 aaKnown RBP31.27■■■□□ 2.6
RGPD6-205ENST00000455695 TRIM26Q12899 539 aaPredicted RBP31.26■■■□□ 2.59
RGPD6-205ENST00000455695 PIK3R4Q99570 1358 aa31.26■■■□□ 2.59
RGPD6-205ENST00000455695 VGFO15240 615 aaPredicted RBP31.25■■■□□ 2.59
RGPD6-205ENST00000455695 SETBP1Q9Y6X0 1596 aa31.25■■■□□ 2.59
RGPD6-205ENST00000455695 PPLO60437 1756 aa31.21■■■□□ 2.59
RGPD6-205ENST00000455695 NRXN3Q9Y4C0 1643 aa31.2■■■□□ 2.59
RGPD6-205ENST00000455695 RBM33Q96EV2 1170 aaKnown RBP31.18■■■□□ 2.58
RGPD6-205ENST00000455695 SLAIN2Q9P270 581 aa31.18■■■□□ 2.58
RGPD6-205ENST00000455695 MSH6P52701 1360 aa31.17■■■□□ 2.58
RGPD6-205ENST00000455695 JCADQ9P266 1359 aa31.17■■■□□ 2.58
RGPD6-205ENST00000455695 RGL3Q3MIN7 710 aa31.15■■■□□ 2.58
RGPD6-205ENST00000455695 SPATA31E1Q6ZUB1 1445 aa31.15■■■□□ 2.58
RGPD6-205ENST00000455695 AMOTL2Q9Y2J4 779 aa31.12■■■□□ 2.57
RGPD6-205ENST00000455695 ANKRD30BQ9BXX2 1392 aa31.1■■■□□ 2.57
RGPD6-205ENST00000455695 PHLPP1O60346 1717 aa31.09■■■□□ 2.57
RGPD6-205ENST00000455695 IFT172Q9UG01 1749 aa31.09■■■□□ 2.57
RGPD6-205ENST00000455695 NCOA3Q9Y6Q9 1424 aa31.08■■■□□ 2.57
RGPD6-205ENST00000455695 PTPRUQ92729 1446 aa31.07■■■□□ 2.56
RGPD6-205ENST00000455695 METP08581 1390 aa31.06■■■□□ 2.56
RGPD6-205ENST00000455695 SETD1AO15047 1707 aaKnown RBP31.05■■■□□ 2.56
RGPD6-205ENST00000455695 XRN1Q8IZH2 1706 aaKnown RBP31.05■■■□□ 2.56
RGPD6-205ENST00000455695 C14orf37Q86TY3 774 aa31.05■■■□□ 2.56
RGPD6-205ENST00000455695 SPATA31A6Q5VVP1 1343 aa31.03■■■□□ 2.56
RGPD6-205ENST00000455695 COL16A1Q07092 1604 aaPredicted RBP31■■■□□ 2.55
RGPD6-205ENST00000455695 ZNF772Q68DY9 489 aaPredicted RBP31■■■□□ 2.55
RGPD6-205ENST00000455695 ADGRF5Q8IZF2 1346 aa30.99■■■□□ 2.55
RGPD6-205ENST00000455695 UPF1Q92900 1129 aaKnown RBP eCLIP30.99■■■□□ 2.55
RGPD6-205ENST00000455695 C19orf44Q9H6X5 657 aa30.97■■■□□ 2.55
RGPD6-205ENST00000455695 LRP6O75581 1613 aa30.95■■■□□ 2.54
RGPD6-205ENST00000455695 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.93■■■□□ 2.54
RGPD6-205ENST00000455695 PIK3C2GO75747 1445 aa30.92■■■□□ 2.54
RGPD6-205ENST00000455695 ATF3P18847 181 aa30.92■■■□□ 2.54
RGPD6-205ENST00000455695 MEX3CQ5U5Q3 659 aaKnown RBP30.92■■■□□ 2.54
RGPD6-205ENST00000455695 CADPS2Q86UW7 1296 aa30.92■■■□□ 2.54
RGPD6-205ENST00000455695 MYOM2P54296 1465 aa30.92■■■□□ 2.54
RGPD6-205ENST00000455695 PTCH1Q13635 1447 aa30.9■■■□□ 2.54
RGPD6-205ENST00000455695 AHDC1Q5TGY3 1603 aaPredicted RBP30.87■■■□□ 2.53
RGPD6-205ENST00000455695 STAC3Q96MF2 364 aa30.87■■■□□ 2.53
RGPD6-205ENST00000455695 DCCP43146 1447 aa30.86■■■□□ 2.53
RGPD6-205ENST00000455695 PRAG1Q86YV5 1406 aa30.86■■■□□ 2.53
RGPD6-205ENST00000455695 NRXN1Q9ULB1 1477 aa30.86■■■□□ 2.53
RGPD6-205ENST00000455695 LAMC1P11047 1609 aa30.86■■■□□ 2.53
RGPD6-205ENST00000455695 RXRBP28702 533 aa30.85■■■□□ 2.53
RGPD6-205ENST00000455695 SHPRHQ149N8 1683 aa30.84■■■□□ 2.53
RGPD6-205ENST00000455695 DCAF11Q8TEB1 546 aa30.83■■■□□ 2.53
RGPD6-205ENST00000455695 PCGF6Q9BYE7 350 aa30.83■■■□□ 2.53
RGPD6-205ENST00000455695 C14orf93Q9H972 538 aaKnown RBP30.83■■■□□ 2.53
RGPD6-205ENST00000455695 ADGRL3Q9HAR2 1447 aa30.82■■■□□ 2.52
RGPD6-205ENST00000455695 ROBO2Q9HCK4 1378 aa30.81■■■□□ 2.52
RGPD6-205ENST00000455695 CDK12Q9NYV4 1490 aaPredicted RBP30.81■■■□□ 2.52
RGPD6-205ENST00000455695 NALCNQ8IZF0 1738 aa30.8■■■□□ 2.52
RGPD6-205ENST00000455695 LRPPRCP42704 1394 aaKnown RBP30.79■■■□□ 2.52
RGPD6-205ENST00000455695 KDM2AQ9Y2K7 1162 aa30.79■■■□□ 2.52
RGPD6-205ENST00000455695 TMEM132EQ6IEE7 984 aa30.78■■■□□ 2.52
RGPD6-205ENST00000455695 STK26Q9P289 416 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms