RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 NWD1Q149M9 1564 aa10.48□□□□□ -0.73
COMMD1-205ENST00000455659 NRXN3Q9Y4C0 1643 aa10.48□□□□□ -0.73
COMMD1-205ENST00000455659 EID1Q9Y6B2 187 aa10.48□□□□□ -0.73
COMMD1-205ENST00000455659 CPS1P31327 1500 aa10.48□□□□□ -0.73
COMMD1-205ENST00000455659 SETBP1Q9Y6X0 1596 aa10.48□□□□□ -0.73
COMMD1-205ENST00000455659 FOXD1Q16676 465 aa10.47□□□□□ -0.73
COMMD1-205ENST00000455659 MPHOSPH9Q99550 1183 aa10.47□□□□□ -0.73
COMMD1-205ENST00000455659 PPP1R15AO75807 674 aaPredicted RBP10.46□□□□□ -0.73
COMMD1-205ENST00000455659 LTKP29376 864 aa10.46□□□□□ -0.73
COMMD1-205ENST00000455659 TXNDC2Q86VQ3 553 aa10.46□□□□□ -0.73
COMMD1-205ENST00000455659 ZNF335Q9H4Z2 1342 aaPredicted RBP10.46□□□□□ -0.73
COMMD1-205ENST00000455659 PLEKHG1Q9ULL1 1385 aa10.46□□□□□ -0.74
COMMD1-205ENST00000455659 SETD1AO15047 1707 aaKnown RBP10.45□□□□□ -0.74
COMMD1-205ENST00000455659 IQSEC2Q5JU85 1478 aa10.44□□□□□ -0.74
COMMD1-205ENST00000455659 CHD2O14647 1828 aaKnown RBP10.44□□□□□ -0.74
COMMD1-205ENST00000455659 NKTRP30414 1462 aaKnown RBP10.43□□□□□ -0.74
COMMD1-205ENST00000455659 SPATA31E1Q6ZUB1 1445 aa10.43□□□□□ -0.74
COMMD1-205ENST00000455659 ZNF326Q5BKZ1 582 aaKnown RBP10.43□□□□□ -0.74
COMMD1-205ENST00000455659 XRN1Q8IZH2 1706 aaKnown RBP10.43□□□□□ -0.74
COMMD1-205ENST00000455659 XIRP1Q702N8 1843 aaKnown RBP10.42□□□□□ -0.74
COMMD1-205ENST00000455659 HRCP23327 699 aa10.42□□□□□ -0.74
COMMD1-205ENST00000455659 TRIM26Q12899 539 aaPredicted RBP10.42□□□□□ -0.74
COMMD1-205ENST00000455659 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.42□□□□□ -0.74
COMMD1-205ENST00000455659 LAMC1P11047 1609 aa10.42□□□□□ -0.74
COMMD1-205ENST00000455659 ADAMTS13Q76LX8 1427 aa10.41□□□□□ -0.74
COMMD1-205ENST00000455659 NUTM2DQ5VT03 806 aaPredicted RBP10.41□□□□□ -0.74
COMMD1-205ENST00000455659 ANKRD30BQ9BXX2 1392 aa10.4□□□□□ -0.74
COMMD1-205ENST00000455659 HDGFP51858 240 aaKnown RBP10.4□□□□□ -0.74
COMMD1-205ENST00000455659 BCANQ96GW7 911 aa10.4□□□□□ -0.74
COMMD1-205ENST00000455659 SENP3Q9H4L4 574 aaPredicted RBP10.4□□□□□ -0.74
COMMD1-205ENST00000455659 MYOM2P54296 1465 aa10.4□□□□□ -0.74
COMMD1-205ENST00000455659 LRRC7Q96NW7 1537 aa10.39□□□□□ -0.75
COMMD1-205ENST00000455659 CERKQ8TCT0 537 aa10.39□□□□□ -0.75
COMMD1-205ENST00000455659 ALKQ9UM73 1620 aa10.38□□□□□ -0.75
COMMD1-205ENST00000455659 SLC26A8Q96RN1 970 aa10.38□□□□□ -0.75
COMMD1-205ENST00000455659 KNDC1Q76NI1 1749 aa10.38□□□□□ -0.75
COMMD1-205ENST00000455659 PIK3C2GO75747 1445 aa10.37□□□□□ -0.75
COMMD1-205ENST00000455659 ASXL1Q8IXJ9 1541 aa10.37□□□□□ -0.75
COMMD1-205ENST00000455659 RPGRIP1LQ68CZ1 1315 aa10.36□□□□□ -0.75
COMMD1-205ENST00000455659 PIK3R4Q99570 1358 aa10.36□□□□□ -0.75
COMMD1-205ENST00000455659 NRXN1Q9ULB1 1477 aa10.36□□□□□ -0.75
COMMD1-205ENST00000455659 NALCNQ8IZF0 1738 aa10.36□□□□□ -0.75
COMMD1-205ENST00000455659 DHX57Q6P158 1386 aaKnown RBP10.35□□□□□ -0.75
COMMD1-205ENST00000455659 RGL3Q3MIN7 710 aa10.34□□□□□ -0.75
COMMD1-205ENST00000455659 PTCH1Q13635 1447 aa10.33□□□□□ -0.76
COMMD1-205ENST00000455659 PTPRUQ92729 1446 aa10.33□□□□□ -0.76
COMMD1-205ENST00000455659 VGFO15240 615 aaPredicted RBP10.33□□□□□ -0.76
COMMD1-205ENST00000455659 FBXO41Q8TF61 875 aa10.33□□□□□ -0.76
COMMD1-205ENST00000455659 METP08581 1390 aa10.33□□□□□ -0.76
COMMD1-205ENST00000455659 TMEM94Q12767 1356 aa10.33□□□□□ -0.76
COMMD1-205ENST00000455659 PRAG1Q86YV5 1406 aa10.33□□□□□ -0.76
COMMD1-205ENST00000455659 KCNA6P17658 529 aa10.32□□□□□ -0.76
COMMD1-205ENST00000455659 TBX22Q9Y458 520 aa10.32□□□□□ -0.76
COMMD1-205ENST00000455659 ADGRF5Q8IZF2 1346 aa10.32□□□□□ -0.76
COMMD1-205ENST00000455659 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.31□□□□□ -0.76
COMMD1-205ENST00000455659 KIAA1210Q9ULL0 1709 aa10.31□□□□□ -0.76
COMMD1-205ENST00000455659 MSH6P52701 1360 aa10.29□□□□□ -0.76
COMMD1-205ENST00000455659 ILDR1Q86SU0 546 aaPredicted RBP10.29□□□□□ -0.76
COMMD1-205ENST00000455659 ADGRB1O14514 1584 aa10.29□□□□□ -0.76
COMMD1-205ENST00000455659 ARHGEF28Q8N1W1 1705 aaKnown RBP10.29□□□□□ -0.76
COMMD1-205ENST00000455659 ROBO1Q9Y6N7 1651 aa10.28□□□□□ -0.76
COMMD1-205ENST00000455659 CDC42BPGQ6DT37 1551 aa10.28□□□□□ -0.76
COMMD1-205ENST00000455659 TECPR2O15040 1411 aa10.28□□□□□ -0.76
COMMD1-205ENST00000455659 ADGRL3Q9HAR2 1447 aa10.28□□□□□ -0.76
COMMD1-205ENST00000455659 UBAP1LF5GYI3 381 aa10.28□□□□□ -0.76
COMMD1-205ENST00000455659 DCCP43146 1447 aa10.27□□□□□ -0.77
COMMD1-205ENST00000455659 NCOA3Q9Y6Q9 1424 aa10.27□□□□□ -0.77
COMMD1-205ENST00000455659 PROSER2Q86WR7 435 aaPredicted RBP10.27□□□□□ -0.77
COMMD1-205ENST00000455659 PCGF6Q9BYE7 350 aa10.27□□□□□ -0.77
COMMD1-205ENST00000455659 AMOTL2Q9Y2J4 779 aa10.27□□□□□ -0.77
COMMD1-205ENST00000455659 SCAF1Q9H7N4 1312 aaKnown RBP10.27□□□□□ -0.77
COMMD1-205ENST00000455659 TRPM1Q7Z4N2 1603 aa10.26□□□□□ -0.77
COMMD1-205ENST00000455659 YTHDC2Q9H6S0 1430 aaKnown RBP10.26□□□□□ -0.77
COMMD1-205ENST00000455659 C14orf37Q86TY3 774 aa10.26□□□□□ -0.77
COMMD1-205ENST00000455659 RBM33Q96EV2 1170 aaKnown RBP10.26□□□□□ -0.77
COMMD1-205ENST00000455659 LRPPRCP42704 1394 aaKnown RBP10.26□□□□□ -0.77
COMMD1-205ENST00000455659 ROBO2Q9HCK4 1378 aa10.26□□□□□ -0.77
COMMD1-205ENST00000455659 DLC1Q96QB1 1528 aa10.25□□□□□ -0.77
COMMD1-205ENST00000455659 DCAF11Q8TEB1 546 aa10.25□□□□□ -0.77
COMMD1-205ENST00000455659 ADGRB2O60241 1585 aa10.24□□□□□ -0.77
COMMD1-205ENST00000455659 TOM1O60784 492 aa10.24□□□□□ -0.77
COMMD1-205ENST00000455659 FMN2Q9NZ56 1722 aa10.24□□□□□ -0.77
COMMD1-205ENST00000455659 PIP4K2BP78356 416 aa10.23□□□□□ -0.77
COMMD1-205ENST00000455659 KDM2AQ9Y2K7 1162 aa10.23□□□□□ -0.77
COMMD1-205ENST00000455659 QRICH2Q9H0J4 1663 aa10.22□□□□□ -0.77
COMMD1-205ENST00000455659 PHLPP1O60346 1717 aa10.22□□□□□ -0.77
COMMD1-205ENST00000455659 CFAP70Q5T0N1 1121 aa10.22□□□□□ -0.77
COMMD1-205ENST00000455659 SIN3AQ96ST3 1273 aa10.22□□□□□ -0.77
COMMD1-205ENST00000455659 TONSLQ96HA7 1378 aa10.22□□□□□ -0.77
COMMD1-205ENST00000455659 FAM135BQ49AJ0 1406 aa10.22□□□□□ -0.77
COMMD1-205ENST00000455659 NHSL1Q5SYE7 1610 aa10.22□□□□□ -0.77
COMMD1-205ENST00000455659 NEUROD1Q13562 356 aa10.21□□□□□ -0.77
COMMD1-205ENST00000455659 TMEM132EQ6IEE7 984 aa10.21□□□□□ -0.77
COMMD1-205ENST00000455659 STAC3Q96MF2 364 aa10.21□□□□□ -0.77
COMMD1-205ENST00000455659 C14orf93Q9H972 538 aaKnown RBP10.21□□□□□ -0.77
COMMD1-205ENST00000455659 STK26Q9P289 416 aa10.21□□□□□ -0.77
COMMD1-205ENST00000455659 ABCC11Q96J66 1382 aa10.21□□□□□ -0.78
COMMD1-205ENST00000455659 MST1RQ04912 1400 aa10.21□□□□□ -0.78
COMMD1-205ENST00000455659 AHDC1Q5TGY3 1603 aaPredicted RBP10.21□□□□□ -0.78
COMMD1-205ENST00000455659 COL16A1Q07092 1604 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms