RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 HSPA2P54652 639 aa15.51■□□□□ 0.07
SYPL1-202ENST00000455385 TIMELESSQ9UNS1 1208 aa15.5■□□□□ 0.07
SYPL1-202ENST00000455385 ZFYVE9O95405 1425 aa15.49■□□□□ 0.07
SYPL1-202ENST00000455385 RIMS2Q9UQ26 1411 aa15.49■□□□□ 0.07
SYPL1-202ENST00000455385 NEXMIFQ5QGS0 1516 aa15.49■□□□□ 0.07
SYPL1-202ENST00000455385 ARHGAP23Q9P227 1491 aa15.49■□□□□ 0.07
SYPL1-202ENST00000455385 ADGRF5Q8IZF2 1346 aa15.48■□□□□ 0.07
SYPL1-202ENST00000455385 SLIT1O75093 1534 aa15.48■□□□□ 0.07
SYPL1-202ENST00000455385 TXNDC2Q86VQ3 553 aa15.48■□□□□ 0.07
SYPL1-202ENST00000455385 PPLO60437 1756 aa15.47■□□□□ 0.07
SYPL1-202ENST00000455385 PPP1R15AO75807 674 aaPredicted RBP15.47■□□□□ 0.07
SYPL1-202ENST00000455385 SENP3Q9H4L4 574 aaPredicted RBP15.47■□□□□ 0.07
SYPL1-202ENST00000455385 IFT172Q9UG01 1749 aa15.47■□□□□ 0.07
SYPL1-202ENST00000455385 VGFO15240 615 aaPredicted RBP15.46■□□□□ 0.07
SYPL1-202ENST00000455385 NBPF8Q3BBV2 869 aa15.45■□□□□ 0.06
SYPL1-202ENST00000455385 AEBP2Q6ZN18 517 aaPredicted RBP15.45■□□□□ 0.06
SYPL1-202ENST00000455385 ANKLE2Q86XL3 938 aa15.45■□□□□ 0.06
SYPL1-202ENST00000455385 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.45■□□□□ 0.06
SYPL1-202ENST00000455385 HDGFP51858 240 aaKnown RBP15.44■□□□□ 0.06
SYPL1-202ENST00000455385 EID1Q9Y6B2 187 aa15.44■□□□□ 0.06
SYPL1-202ENST00000455385 NCKAP5LQ9HCH0 1330 aa15.44■□□□□ 0.06
SYPL1-202ENST00000455385 STAC3Q96MF2 364 aa15.43■□□□□ 0.06
SYPL1-202ENST00000455385 MYOM2P54296 1465 aa15.42■□□□□ 0.06
SYPL1-202ENST00000455385 NRXN1Q9ULB1 1477 aa15.42■□□□□ 0.06
SYPL1-202ENST00000455385 SCAF11Q99590 1463 aaKnown RBP15.41■□□□□ 0.06
SYPL1-202ENST00000455385 PRAG1Q86YV5 1406 aa15.41■□□□□ 0.06
SYPL1-202ENST00000455385 PIK3C2GO75747 1445 aa15.39■□□□□ 0.05
SYPL1-202ENST00000455385 CFAP70Q5T0N1 1121 aa15.39■□□□□ 0.05
SYPL1-202ENST00000455385 PLEKHG1Q9ULL1 1385 aa15.39■□□□□ 0.05
SYPL1-202ENST00000455385 ZEB1P37275 1124 aaPredicted RBP15.39■□□□□ 0.05
SYPL1-202ENST00000455385 C14orf93Q9H972 538 aaKnown RBP15.38■□□□□ 0.05
SYPL1-202ENST00000455385 STRCQ7RTU9 1775 aa15.38■□□□□ 0.05
SYPL1-202ENST00000455385 BCANQ96GW7 911 aa15.38■□□□□ 0.05
SYPL1-202ENST00000455385 NBPF1Q3BBV0 1214 aa15.37■□□□□ 0.05
SYPL1-202ENST00000455385 SLC26A8Q96RN1 970 aa15.37■□□□□ 0.05
SYPL1-202ENST00000455385 MED14O60244 1454 aa15.37■□□□□ 0.05
SYPL1-202ENST00000455385 NRXN3Q9Y4C0 1643 aa15.37■□□□□ 0.05
SYPL1-202ENST00000455385 ADAMTS13Q76LX8 1427 aa15.36■□□□□ 0.05
SYPL1-202ENST00000455385 NPHP4O75161 1426 aaPredicted RBP15.36■□□□□ 0.05
SYPL1-202ENST00000455385 POLR1AO95602 1720 aaPredicted RBP15.36■□□□□ 0.05
SYPL1-202ENST00000455385 SETBP1Q9Y6X0 1596 aa15.35■□□□□ 0.05
SYPL1-202ENST00000455385 TMEM132EQ6IEE7 984 aa15.34■□□□□ 0.05
SYPL1-202ENST00000455385 IQGAP1P46940 1657 aa15.34■□□□□ 0.05
SYPL1-202ENST00000455385 ALKQ9UM73 1620 aa15.34■□□□□ 0.05
SYPL1-202ENST00000455385 TBX22Q9Y458 520 aa15.34■□□□□ 0.05
SYPL1-202ENST00000455385 METP08581 1390 aa15.32■□□□□ 0.04
SYPL1-202ENST00000455385 TRPM1Q7Z4N2 1603 aa15.32■□□□□ 0.04
SYPL1-202ENST00000455385 SETD1AO15047 1707 aaKnown RBP15.31■□□□□ 0.04
SYPL1-202ENST00000455385 RALGAPBQ86X10 1494 aa15.3■□□□□ 0.04
SYPL1-202ENST00000455385 ASXL1Q8IXJ9 1541 aa15.3■□□□□ 0.04
SYPL1-202ENST00000455385 KIAA1210Q9ULL0 1709 aa15.29■□□□□ 0.04
SYPL1-202ENST00000455385 ROCK2O75116 1388 aaKnown RBP15.29■□□□□ 0.04
SYPL1-202ENST00000455385 ADGRB1O14514 1584 aa15.29■□□□□ 0.04
SYPL1-202ENST00000455385 GPRASP1Q5JY77 1395 aa15.28■□□□□ 0.04
SYPL1-202ENST00000455385 CARD11Q9BXL7 1154 aa15.27■□□□□ 0.04
SYPL1-202ENST00000455385 LAMC1P11047 1609 aa15.27■□□□□ 0.04
SYPL1-202ENST00000455385 PTPRUQ92729 1446 aa15.27■□□□□ 0.03
SYPL1-202ENST00000455385 STK26Q9P289 416 aa15.26■□□□□ 0.03
SYPL1-202ENST00000455385 DIP2AQ14689 1571 aa15.26■□□□□ 0.03
SYPL1-202ENST00000455385 DMRT2Q9Y5R5 561 aa15.26■□□□□ 0.03
SYPL1-202ENST00000455385 YTHDC2Q9H6S0 1430 aaKnown RBP15.25■□□□□ 0.03
SYPL1-202ENST00000455385 AMOTL2Q9Y2J4 779 aa15.25■□□□□ 0.03
SYPL1-202ENST00000455385 TRAK1Q9UPV9 953 aa15.24■□□□□ 0.03
SYPL1-202ENST00000455385 LRPPRCP42704 1394 aaKnown RBP15.24■□□□□ 0.03
SYPL1-202ENST00000455385 PIK3R4Q99570 1358 aa15.23■□□□□ 0.03
SYPL1-202ENST00000455385 KCNA6P17658 529 aa15.22■□□□□ 0.03
SYPL1-202ENST00000455385 CHD2O14647 1828 aaKnown RBP15.22■□□□□ 0.03
SYPL1-202ENST00000455385 ABCC11Q96J66 1382 aa15.22■□□□□ 0.03
SYPL1-202ENST00000455385 ZNF335Q9H4Z2 1342 aaPredicted RBP15.2■□□□□ 0.02
SYPL1-202ENST00000455385 WAPLQ7Z5K2 1190 aa15.2■□□□□ 0.02
SYPL1-202ENST00000455385 USP47Q96K76 1375 aa15.19■□□□□ 0.02
SYPL1-202ENST00000455385 ROBO2Q9HCK4 1378 aa15.19■□□□□ 0.02
SYPL1-202ENST00000455385 STRCP1A6NGW2 1772 aa15.19■□□□□ 0.02
SYPL1-202ENST00000455385 HIRIP3Q9BW71 556 aaPredicted RBP15.19■□□□□ 0.02
SYPL1-202ENST00000455385 TECPR2O15040 1411 aa15.18■□□□□ 0.02
SYPL1-202ENST00000455385 HSPA5P11021 654 aaKnown RBP15.18■□□□□ 0.02
SYPL1-202ENST00000455385 XRN1Q8IZH2 1706 aaKnown RBP15.18■□□□□ 0.02
SYPL1-202ENST00000455385 ST20-MTHFSA0A0A6YYL1 179 aa15.18■□□□□ 0.02
SYPL1-202ENST00000455385 PRAM1Q96QH2 718 aa15.18■□□□□ 0.02
SYPL1-202ENST00000455385 PLEKHH1Q9ULM0 1364 aa15.18■□□□□ 0.02
SYPL1-202ENST00000455385 EIF4G2P78344 907 aaKnown RBP eCLIP15.17■□□□□ 0.02
SYPL1-202ENST00000455385 SIRT1Q96EB6 747 aa15.17■□□□□ 0.02
SYPL1-202ENST00000455385 RBM33Q96EV2 1170 aaKnown RBP15.17■□□□□ 0.02
SYPL1-202ENST00000455385 SAFB2Q14151 953 aaKnown RBP eCLIP15.16■□□□□ 0.02
SYPL1-202ENST00000455385 NWD1Q149M9 1564 aa15.16■□□□□ 0.02
SYPL1-202ENST00000455385 KNDC1Q76NI1 1749 aa15.16■□□□□ 0.02
SYPL1-202ENST00000455385 ARHGEF28Q8N1W1 1705 aaKnown RBP15.16■□□□□ 0.02
SYPL1-202ENST00000455385 DLC1Q96QB1 1528 aa15.15■□□□□ 0.02
SYPL1-202ENST00000455385 POGKQ9P215 609 aa15.15■□□□□ 0.02
SYPL1-202ENST00000455385 CPS1P31327 1500 aa15.14■□□□□ 0.01
SYPL1-202ENST00000455385 PTCH1Q13635 1447 aa15.14■□□□□ 0.01
SYPL1-202ENST00000455385 FAM135BQ49AJ0 1406 aa15.14■□□□□ 0.01
SYPL1-202ENST00000455385 PROSER2Q86WR7 435 aaPredicted RBP15.14■□□□□ 0.01
SYPL1-202ENST00000455385 TESK2Q96S53 571 aa15.14■□□□□ 0.01
SYPL1-202ENST00000455385 CENPJQ9HC77 1338 aaPredicted RBP15.13■□□□□ 0.01
SYPL1-202ENST00000455385 EIF3AQ14152 1382 aaKnown RBP15.12■□□□□ 0.01
SYPL1-202ENST00000455385 NKTRP30414 1462 aaKnown RBP15.11■□□□□ 0.01
SYPL1-202ENST00000455385 MINK1Q8N4C8 1332 aaPredicted RBP15.11■□□□□ 0.01
SYPL1-202ENST00000455385 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.1■□□□□ 0.01
SYPL1-202ENST00000455385 LTBP4Q8N2S1 1624 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms