RNA–Protein interactions for RNA: ENST00000455163.1

LINC02249-201, Transcript of long intergenic non-protein coding RNA 2249, humanhuman

Gene LINC02249, Length 399 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02249-201ENST00000455163 CTTNBP2Q8WZ74 1663 aa6.8□□□□□ -1.32
LINC02249-201ENST00000455163 UGGT2Q9NYU1 1516 aa6.8□□□□□ -1.32
LINC02249-201ENST00000455163 UHRF1BP1LA0JNW5 1464 aa6.79□□□□□ -1.32
LINC02249-201ENST00000455163 RAPGEF2Q9Y4G8 1499 aa6.79□□□□□ -1.32
LINC02249-201ENST00000455163 GLI2P10070 1586 aa6.79□□□□□ -1.32
LINC02249-201ENST00000455163 UACAQ9BZF9 1416 aa6.79□□□□□ -1.32
LINC02249-201ENST00000455163 SOWAHBA6NEL2 793 aa6.79□□□□□ -1.32
LINC02249-201ENST00000455163 RABGEF1Q9UJ41 708 aa6.79□□□□□ -1.32
LINC02249-201ENST00000455163 PROX2Q3B8N5 592 aa6.78□□□□□ -1.32
LINC02249-201ENST00000455163 ZNF787Q6DD87 383 aa6.78□□□□□ -1.32
LINC02249-201ENST00000455163 ZDHHC16Q969W1 377 aa6.78□□□□□ -1.32
LINC02249-201ENST00000455163 MAP3K4Q9Y6R4 1608 aa6.78□□□□□ -1.32
LINC02249-201ENST00000455163 COL17A1Q9UMD9 1497 aaPredicted RBP6.78□□□□□ -1.32
LINC02249-201ENST00000455163 EPRSP07814 1512 aaKnown RBP6.77□□□□□ -1.33
LINC02249-201ENST00000455163 KDM5BQ9UGL1 1544 aa6.77□□□□□ -1.33
LINC02249-201ENST00000455163 PLB1Q6P1J6 1458 aa6.77□□□□□ -1.33
LINC02249-201ENST00000455163 NRG2O14511 850 aaPredicted RBP6.76□□□□□ -1.33
LINC02249-201ENST00000455163 NYAP1Q6ZVC0 841 aa6.76□□□□□ -1.33
LINC02249-201ENST00000455163 RGL2O15211 777 aa6.75□□□□□ -1.33
LINC02249-201ENST00000455163 COL9A1P20849 921 aa6.75□□□□□ -1.33
LINC02249-201ENST00000455163 ABCA8O94911 1581 aa6.74□□□□□ -1.33
LINC02249-201ENST00000455163 ZFRQ96KR1 1074 aaKnown RBP6.74□□□□□ -1.33
LINC02249-201ENST00000455163 PRXQ9BXM0 1461 aa6.73□□□□□ -1.33
LINC02249-201ENST00000455163 PPP1R3GB7ZBB8 358 aa6.73□□□□□ -1.33
LINC02249-201ENST00000455163 LAPTM4BQ86VI4 370 aa6.73□□□□□ -1.33
LINC02249-201ENST00000455163 PRKD2Q9BZL6 878 aa6.73□□□□□ -1.33
LINC02249-201ENST00000455163 ADGRL1O94910 1474 aa6.73□□□□□ -1.33
LINC02249-201ENST00000455163 EVI5O60447 810 aa6.72□□□□□ -1.33
LINC02249-201ENST00000455163 WDR7Q9Y4E6 1490 aa6.72□□□□□ -1.33
LINC02249-201ENST00000455163 ECM2O94769 699 aaPredicted RBP6.71□□□□□ -1.34
LINC02249-201ENST00000455163 CRISPLD2Q9H0B8 497 aa6.71□□□□□ -1.34
LINC02249-201ENST00000455163 CFAP43Q8NDM7 1665 aa6.71□□□□□ -1.34
LINC02249-201ENST00000455163 ARID3CA6NKF2 412 aa6.7□□□□□ -1.34
LINC02249-201ENST00000455163 KIAA1468Q9P260 1216 aa6.7□□□□□ -1.34
LINC02249-201ENST00000455163 PCDHGA10Q9Y5H3 936 aa6.7□□□□□ -1.34
LINC02249-201ENST00000455163 GOLGA3Q08378 1498 aa6.7□□□□□ -1.34
LINC02249-201ENST00000455163 TEX14Q8IWB6 1497 aa6.7□□□□□ -1.34
LINC02249-201ENST00000455163 PPP1R15BQ5SWA1 713 aa6.69□□□□□ -1.34
LINC02249-201ENST00000455163 P3H3Q8IVL6 736 aa6.69□□□□□ -1.34
LINC02249-201ENST00000455163 SAMD9Q5K651 1589 aa6.69□□□□□ -1.34
LINC02249-201ENST00000455163 MAGI3Q5TCQ9 1506 aa6.68□□□□□ -1.34
LINC02249-201ENST00000455163 SEPT9Q9UHD8 586 aaPredicted RBP6.68□□□□□ -1.34
LINC02249-201ENST00000455163 KIF21BO75037 1637 aa6.68□□□□□ -1.34
LINC02249-201ENST00000455163 CD109Q6YHK3 1445 aa6.67□□□□□ -1.34
LINC02249-201ENST00000455163 ATP10BO94823 1461 aa6.67□□□□□ -1.34
LINC02249-201ENST00000455163 TJAP1Q5JTD0 557 aa6.67□□□□□ -1.34
LINC02249-201ENST00000455163 TSR3Q9UJK0 312 aaKnown RBP6.67□□□□□ -1.34
LINC02249-201ENST00000455163 V9GY48 417 aaPredicted RBP6.67□□□□□ -1.34
LINC02249-201ENST00000455163 HECW2Q9P2P5 1572 aa6.66□□□□□ -1.34
LINC02249-201ENST00000455163 RAPGEF6Q8TEU7 1601 aa6.66□□□□□ -1.34
LINC02249-201ENST00000455163 PKD2Q13563 968 aa6.66□□□□□ -1.34
LINC02249-201ENST00000455163 HPS5Q9UPZ3 1129 aa6.66□□□□□ -1.34
LINC02249-201ENST00000455163 ABCA9Q8IUA7 1624 aa6.65□□□□□ -1.34
LINC02249-201ENST00000455163 PPP1R18Q6NYC8 613 aa6.65□□□□□ -1.34
LINC02249-201ENST00000455163 NCKAP5LQ9HCH0 1330 aa6.65□□□□□ -1.35
LINC02249-201ENST00000455163 ONECUT3O60422 494 aaPredicted RBP6.64□□□□□ -1.35
LINC02249-201ENST00000455163 RANGAP1P46060 587 aaPredicted RBP6.64□□□□□ -1.35
LINC02249-201ENST00000455163 LCE2AQ5TA79 106 aaPredicted RBP6.64□□□□□ -1.35
LINC02249-201ENST00000455163 PDZRN3Q9UPQ7 1066 aa6.64□□□□□ -1.35
LINC02249-201ENST00000455163 POTECB2RU33 542 aa6.63□□□□□ -1.35
LINC02249-201ENST00000455163 NUP153P49790 1475 aaKnown RBP6.63□□□□□ -1.35
LINC02249-201ENST00000455163 FHOD3Q2V2M9 1422 aa6.63□□□□□ -1.35
LINC02249-201ENST00000455163 FRMPD1Q5SYB0 1578 aa6.63□□□□□ -1.35
LINC02249-201ENST00000455163 ARAP3Q8WWN8 1544 aa6.63□□□□□ -1.35
LINC02249-201ENST00000455163 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.63□□□□□ -1.35
LINC02249-201ENST00000455163 FAM98CQ17RN3 349 aaKnown RBP6.62□□□□□ -1.35
LINC02249-201ENST00000455163 FAM9AQ8IZU1 332 aaPredicted RBP6.62□□□□□ -1.35
LINC02249-201ENST00000455163 LRCH3Q96II8 777 aa6.61□□□□□ -1.35
LINC02249-201ENST00000455163 SIGLEC1Q9BZZ2 1709 aa6.61□□□□□ -1.35
LINC02249-201ENST00000455163 ADAMTSL3P82987 1691 aa6.61□□□□□ -1.35
LINC02249-201ENST00000455163 RICTORQ6R327 1708 aa6.6□□□□□ -1.35
LINC02249-201ENST00000455163 TRIM6-TRIM34B2RNG4 842 aa6.6□□□□□ -1.35
LINC02249-201ENST00000455163 RAPGEF3O95398 923 aa6.6□□□□□ -1.35
LINC02249-201ENST00000455163 EMILIN3Q9NT22 766 aa6.6□□□□□ -1.35
LINC02249-201ENST00000455163 MAP3K9P80192 1104 aa6.59□□□□□ -1.35
LINC02249-201ENST00000455163 TYW1BQ6NUM6 668 aa6.59□□□□□ -1.35
LINC02249-201ENST00000455163 TRIM67Q6ZTA4 783 aa6.59□□□□□ -1.35
LINC02249-201ENST00000455163 ZNF516Q92618 1163 aa6.59□□□□□ -1.35
LINC02249-201ENST00000455163 FBXW7Q969H0 707 aa6.59□□□□□ -1.35
LINC02249-201ENST00000455163 MTRQ99707 1265 aa6.59□□□□□ -1.35
LINC02249-201ENST00000455163 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.59□□□□□ -1.35
LINC02249-201ENST00000455163 TTC37Q6PGP7 1564 aa6.59□□□□□ -1.35
LINC02249-201ENST00000455163 BCORL1Q5H9F3 1711 aa6.59□□□□□ -1.36
LINC02249-201ENST00000455163 MADDQ8WXG6 1647 aa6.58□□□□□ -1.36
LINC02249-201ENST00000455163 PHF14O94880 888 aa6.58□□□□□ -1.36
LINC02249-201ENST00000455163 C6orf132Q5T0Z8 1188 aa6.58□□□□□ -1.36
LINC02249-201ENST00000455163 CDK13Q14004 1512 aaKnown RBP6.58□□□□□ -1.36
LINC02249-201ENST00000455163 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.58□□□□□ -1.36
LINC02249-201ENST00000455163 LRRIQ1Q96JM4 1722 aa6.58□□□□□ -1.36
LINC02249-201ENST00000455163 NEO1Q92859 1461 aa6.58□□□□□ -1.36
LINC02249-201ENST00000455163 EEA1Q15075 1411 aa6.58□□□□□ -1.36
LINC02249-201ENST00000455163 NKX1-1Q15270 411 aaPredicted RBP6.57□□□□□ -1.36
LINC02249-201ENST00000455163 HS6ST3Q8IZP7 471 aa6.57□□□□□ -1.36
LINC02249-201ENST00000455163 PTPRMP28827 1452 aa6.57□□□□□ -1.36
LINC02249-201ENST00000455163 EFCAB5A4FU69 1503 aa6.56□□□□□ -1.36
LINC02249-201ENST00000455163 RIMS1Q86UR5 1692 aaKnown RBP6.56□□□□□ -1.36
LINC02249-201ENST00000455163 PDE4AP27815 886 aa6.56□□□□□ -1.36
LINC02249-201ENST00000455163 PPP4CP60510 307 aa6.56□□□□□ -1.36
LINC02249-201ENST00000455163 MYT1Q01538 1121 aa6.56□□□□□ -1.36
LINC02249-201ENST00000455163 IL21Q9HBE4 155 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms