RNA–Protein interactions for RNA: ENST00000455163.1

LINC02249-201, Transcript of long intergenic non-protein coding RNA 2249, humanhuman

Gene LINC02249, Length 399 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02249-201ENST00000455163 AEBP2Q6ZN18 517 aaPredicted RBP18.02■□□□□ 0.48
LINC02249-201ENST00000455163 CHIC1Q5VXU3 224 aa16.66■□□□□ 0.26
LINC02249-201ENST00000455163 SENP3Q9H4L4 574 aaPredicted RBP15.31■□□□□ 0.04
LINC02249-201ENST00000455163 PHF23Q9BUL5 403 aaPredicted RBP15.1■□□□□ 0.01
LINC02249-201ENST00000455163 FOXD1Q16676 465 aa14.42□□□□□ -0.1
LINC02249-201ENST00000455163 POTEDQ86YR6 584 aa14.21□□□□□ -0.13
LINC02249-201ENST00000455163 MSH5O43196 834 aa13.58□□□□□ -0.24
LINC02249-201ENST00000455163 PIAS4Q8N2W9 510 aaPredicted RBP13.28□□□□□ -0.28
LINC02249-201ENST00000455163 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
LINC02249-201ENST00000455163 ADRA2BP18089 450 aa13.03□□□□□ -0.32
LINC02249-201ENST00000455163 PLPPR3Q6T4P5 718 aa12.93□□□□□ -0.34
LINC02249-201ENST00000455163 MAPK8IP2Q13387 824 aaPredicted RBP12.15□□□□□ -0.46
LINC02249-201ENST00000455163 DMRT2Q9Y5R5 561 aa12.1□□□□□ -0.47
LINC02249-201ENST00000455163 CACNB1Q02641 598 aaPredicted RBP11.98□□□□□ -0.49
LINC02249-201ENST00000455163 SCAF1Q9H7N4 1312 aaKnown RBP11.78□□□□□ -0.52
LINC02249-201ENST00000455163 RNF39Q9H2S5 420 aa11.61□□□□□ -0.55
LINC02249-201ENST00000455163 DCAF8L1A6NGE4 600 aa11.56□□□□□ -0.56
LINC02249-201ENST00000455163 HOXD11P31277 338 aaPredicted RBP11.48□□□□□ -0.57
LINC02249-201ENST00000455163 C1QBPQ07021 282 aaKnown RBP11.36□□□□□ -0.59
LINC02249-201ENST00000455163 PPP4R3CPQ6ZMV5 832 aa11.31□□□□□ -0.6
LINC02249-201ENST00000455163 RNF216Q9NWF9 866 aaPredicted RBP11.22□□□□□ -0.61
LINC02249-201ENST00000455163 CNKSR2Q8WXI2 1034 aa11.18□□□□□ -0.62
LINC02249-201ENST00000455163 DNAJC5BQ9UF47 199 aa11.14□□□□□ -0.63
LINC02249-201ENST00000455163 POTEHQ6S545 545 aa11□□□□□ -0.65
LINC02249-201ENST00000455163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINC02249-201ENST00000455163 DSG3P32926 999 aa10.71□□□□□ -0.69
LINC02249-201ENST00000455163 SPINK5Q9NQ38 1064 aaPredicted RBP10.67□□□□□ -0.7
LINC02249-201ENST00000455163 U3KPZ7 1027 aaPredicted RBP10.65□□□□□ -0.7
LINC02249-201ENST00000455163 NCBP3Q53F19 620 aaKnown RBP10.63□□□□□ -0.71
LINC02249-201ENST00000455163 NPM3O75607 178 aaKnown RBP10.58□□□□□ -0.72
LINC02249-201ENST00000455163 CAPN15O75808 1086 aa10.58□□□□□ -0.72
LINC02249-201ENST00000455163 ABCB7O75027 752 aa10.34□□□□□ -0.75
LINC02249-201ENST00000455163 TRHP20396 242 aaPredicted RBP10.31□□□□□ -0.76
LINC02249-201ENST00000455163 SLC4A2P04920 1241 aa10.29□□□□□ -0.76
LINC02249-201ENST00000455163 ZNF219Q9P2Y4 722 aaPredicted RBP10.23□□□□□ -0.77
LINC02249-201ENST00000455163 CHRDL2Q6WN34 429 aa10.17□□□□□ -0.78
LINC02249-201ENST00000455163 APLP2Q06481 763 aa10.13□□□□□ -0.79
LINC02249-201ENST00000455163 RBM42Q9BTD8 480 aaKnown RBP10.12□□□□□ -0.79
LINC02249-201ENST00000455163 SP7Q8TDD2 431 aaPredicted RBP10.06□□□□□ -0.8
LINC02249-201ENST00000455163 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.04□□□□□ -0.8
LINC02249-201ENST00000455163 HNRNPUL2Q1KMD3 747 aaKnown RBP10.04□□□□□ -0.8
LINC02249-201ENST00000455163 SAMD1Q6SPF0 538 aaPredicted RBP9.99□□□□□ -0.81
LINC02249-201ENST00000455163 KCNA4P22459 653 aa9.95□□□□□ -0.82
LINC02249-201ENST00000455163 POLA2Q14181 598 aa9.95□□□□□ -0.82
LINC02249-201ENST00000455163 NISCHQ9Y2I1 1504 aa9.93□□□□□ -0.82
LINC02249-201ENST00000455163 PIP4P2Q8N4L2 257 aa9.85□□□□□ -0.83
LINC02249-201ENST00000455163 AKT1S1Q96B36 256 aa9.83□□□□□ -0.84
LINC02249-201ENST00000455163 REM2Q8IYK8 340 aaPredicted RBP9.78□□□□□ -0.84
LINC02249-201ENST00000455163 HAX1O00165 279 aa9.76□□□□□ -0.85
LINC02249-201ENST00000455163 MYCNP04198 464 aaPredicted RBP9.73□□□□□ -0.85
LINC02249-201ENST00000455163 EVX2Q03828 476 aa9.73□□□□□ -0.85
LINC02249-201ENST00000455163 FXR2P51116 673 aaKnown RBP eCLIP9.71□□□□□ -0.86
LINC02249-201ENST00000455163 PITPNM1O00562 1244 aa9.69□□□□□ -0.86
LINC02249-201ENST00000455163 ATF5Q9Y2D1 282 aaPredicted RBP9.68□□□□□ -0.86
LINC02249-201ENST00000455163 OSCARQ8IYS5 282 aa9.64□□□□□ -0.87
LINC02249-201ENST00000455163 ZBTB12Q9Y330 459 aaPredicted RBP9.6□□□□□ -0.87
LINC02249-201ENST00000455163 LHX8Q68G74 356 aa9.43□□□□□ -0.9
LINC02249-201ENST00000455163 C19orf67A6NJJ6 358 aa9.42□□□□□ -0.9
LINC02249-201ENST00000455163 GABBR2O75899 941 aa9.41□□□□□ -0.9
LINC02249-201ENST00000455163 PRKAR2AP13861 404 aaKnown RBP9.4□□□□□ -0.9
LINC02249-201ENST00000455163 FOXD4L1Q9NU39 408 aa9.38□□□□□ -0.91
LINC02249-201ENST00000455163 SPDYE2BA6NHP3 402 aa9.32□□□□□ -0.92
LINC02249-201ENST00000455163 SPDYE6P0CI01 402 aa9.32□□□□□ -0.92
LINC02249-201ENST00000455163 SPDYE2Q495Y8 402 aa9.32□□□□□ -0.92
LINC02249-201ENST00000455163 CLEC11AQ9Y240 323 aa9.29□□□□□ -0.92
LINC02249-201ENST00000455163 POTEIP0CG38 1075 aa9.27□□□□□ -0.93
LINC02249-201ENST00000455163 SPDYE1Q8NFV5 336 aaPredicted RBP9.26□□□□□ -0.93
LINC02249-201ENST00000455163 CHADLQ6NUI6 762 aa9.24□□□□□ -0.93
LINC02249-201ENST00000455163 SLC4A1APQ9BWU0 796 aaKnown RBP9.23□□□□□ -0.93
LINC02249-201ENST00000455163 PLSCR2Q9NRY7 297 aa9.22□□□□□ -0.93
LINC02249-201ENST00000455163 ZBTB22O15209 634 aa9.19□□□□□ -0.94
LINC02249-201ENST00000455163 MKRN4PQ13434 485 aaPredicted RBP9.19□□□□□ -0.94
LINC02249-201ENST00000455163 SSUH2Q9Y2M2 353 aa9.19□□□□□ -0.94
LINC02249-201ENST00000455163 FBLN2P98095 1184 aa9.16□□□□□ -0.94
LINC02249-201ENST00000455163 ZNF692Q9BU19 519 aaPredicted RBP9.13□□□□□ -0.95
LINC02249-201ENST00000455163 ATXN8OSP0DMR3 200 aa9.12□□□□□ -0.95
LINC02249-201ENST00000455163 PRR29P0C7W0 189 aa9.06□□□□□ -0.96
LINC02249-201ENST00000455163 CD44P16070 742 aaKnown RBP9.06□□□□□ -0.96
LINC02249-201ENST00000455163 FARP1Q9Y4F1 1045 aaPredicted RBP9.01□□□□□ -0.97
LINC02249-201ENST00000455163 PABPN1Q86U42 306 aaKnown RBP eCLIP9□□□□□ -0.97
LINC02249-201ENST00000455163 OTUD5Q96G74 571 aa8.98□□□□□ -0.97
LINC02249-201ENST00000455163 ABCC9O60706 1549 aa8.98□□□□□ -0.97
LINC02249-201ENST00000455163 CLCN6P51797 869 aa8.97□□□□□ -0.97
LINC02249-201ENST00000455163 DCBLD2Q96PD2 775 aa8.97□□□□□ -0.97
LINC02249-201ENST00000455163 POTEB2H3BUK9 544 aa8.96□□□□□ -0.98
LINC02249-201ENST00000455163 CCDC180Q9P1Z9 1646 aa8.93□□□□□ -0.98
LINC02249-201ENST00000455163 ZNF579Q8NAF0 562 aaKnown RBP8.91□□□□□ -0.98
LINC02249-201ENST00000455163 POTEMA6NI47 508 aa8.9□□□□□ -0.98
LINC02249-201ENST00000455163 GALR2O43603 387 aaPredicted RBP8.88□□□□□ -0.99
LINC02249-201ENST00000455163 POTEGQ6S5H5 508 aa8.87□□□□□ -0.99
LINC02249-201ENST00000455163 ZRANB1Q9UGI0 708 aa8.86□□□□□ -0.99
LINC02249-201ENST00000455163 PELP1Q8IZL8 1130 aaKnown RBP8.8□□□□□ -1
LINC02249-201ENST00000455163 CREBZFQ9NS37 354 aa8.79□□□□□ -1
LINC02249-201ENST00000455163 POTEJP0CG39 1038 aa8.76□□□□□ -1.01
LINC02249-201ENST00000455163 LCE2DQ5TA82 110 aaPredicted RBP8.75□□□□□ -1.01
LINC02249-201ENST00000455163 PHF12Q96QT6 1004 aa8.73□□□□□ -1.01
LINC02249-201ENST00000455163 PCDH10Q9P2E7 1040 aa8.73□□□□□ -1.01
LINC02249-201ENST00000455163 METRNQ9UJH8 293 aa8.65□□□□□ -1.02
LINC02249-201ENST00000455163 ASTLQ6HA08 431 aaPredicted RBP8.64□□□□□ -1.03
LINC02249-201ENST00000455163 ATMINO43313 823 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms